Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
581
views
Comment: Comment: allele frequency from different read depths
13 months ago by rthapa ▴ 60
0
votes
1
reply
581
views
Comment: Comment: allele frequency from different read depths
13 months ago by rthapa ▴ 60
1
vote
5
replies
581
views
allele frequency from different read depths
allele depth frequency vcf read
updated 13 months ago by ▴ 410 • written 13 months ago by ▴ 60
0
votes
0
replies
591
views
Comment: Comment: subset of paired end reads from bam file or fastq file of different depth
13 months ago by rthapa ▴ 60
0
votes
2
replies
591
views
subset of paired end reads from bam file or fastq file of different depth
depth ShortRead samtools read
13 months ago by rthapa ▴ 60
0
votes
3
replies
606
views
Issue on downloading fastPHASE in Mac
fastPHASE
updated 13 months ago by ★ 2.0k • written 23 months ago by ▴ 60
0
votes
1
reply
622
views
Comment: Comment: Fis, Ho and He calculation from Whole Genome Seq data
14 months ago by rthapa ▴ 60
0
votes
0
replies
339
views
Discrepancy in structural variants results from mauve and MUM&Co
assembly structural variants mauve MUMandCo
updated 16 months ago by 20 • written 17 months ago by ▴ 60
0
votes
0
replies
425
views
Identification of presence of genes by aligning the illumina reads to reference genome with Geneious
geneious alignment mapping
16 months ago by rthapa ▴ 60
0
votes
0
replies
229
views
finding coverage of particular gene sequence from illumina short reads
coverage illumina
16 months ago by rthapa ▴ 60
0
votes
0
replies
3.8k
views
Comment: C: Whole-genome alignment of two or more bacterial genomes - find structural varian
16 months ago by rthapa ▴ 60
0
votes
1
reply
2.4k
views
Comment: C: mummer dot plot
16 months ago by rthapa ▴ 60
0
votes
0
replies
1.5k
views
Comment: C: MUMmer plot visualization
16 months ago by rthapa ▴ 60
0
votes
1
reply
1.5k
views
Comment: C: MUMmer plot visualization
updated 16 months ago by 117k • written 16 months ago by ▴ 60
0
votes
1
reply
1.5k
views
Comment: C: MUMmer plot visualization
updated 16 months ago by 117k • written 16 months ago by ▴ 60
0
votes
6
replies
1.5k
views
MUMmer plot visualization
MUMmer plot
updated 16 months ago by 117k • written 16 months ago by ▴ 60
0
votes
0
replies
427
views
MUMmer for structural variant call
MUMmer structural variants circlator
16 months ago by rthapa ▴ 60
0
votes
1
reply
741
views
Comment: C: Rotate circular contigs to replication initiator protein (ex. dnaA, repA)
16 months ago by rthapa ▴ 60
0
votes
1
reply
741
views
Comment: C: Rotate circular contigs to replication initiator protein (ex. dnaA, repA)
16 months ago by rthapa ▴ 60
0
votes
0
replies
363
views
Assembly based structural variants detection
Assembly structural variants syri mumandco
16 months ago by rthapa ▴ 60
0
votes
0
replies
1.3k
views
Comment: C: Mauve alignment vs samtools for SNP calling
16 months ago by rthapa ▴ 60
0
votes
1
reply
1.3k
views
Comment: C: Mauve alignment vs samtools for SNP calling
17 months ago by rthapa ▴ 60
0
votes
1
reply
1.3k
views
Comment: C: Mauve alignment vs samtools for SNP calling
17 months ago by rthapa ▴ 60
0
votes
0
replies
292
views
Structural variants call from circular genome
Assembly structural variants bacterial genome
17 months ago by rthapa ▴ 60
0
votes
1
reply
539
views
Comment: C: Assembly based structural variants call from bacterial genome
17 months ago by rthapa ▴ 60
0
votes
3
replies
539
views
Assembly based structural variants call from bacterial genome
nanopore structural variants Assembly
17 months ago by rthapa ▴ 60
0
votes
0
replies
621
views
Comment: C: Hybrid Assembly approaches and advantage of having a circular genome assembly
17 months ago by rthapa ▴ 60
0
votes
0
replies
576
views
Comment: C: Structural variants detection from assembled genome from Nanopore sequence data
17 months ago by rthapa ▴ 60
0
votes
1
reply
576
views
Comment: C: Structural variants detection from assembled genome from Nanopore sequence data
17 months ago by rthapa ▴ 60
0
votes
4
replies
576
views
Structural variants detection from assembled genome from Nanopore sequence data
genome Assembly nanopore
updated 17 months ago by ★ 1.8k • written 17 months ago by ▴ 60
0
votes
1
reply
665
views
Comment: C: Running Mauve on circular genomes
17 months ago by rthapa ▴ 60
0
votes
1
reply
665
views
Comment: C: Running Mauve on circular genomes
17 months ago by rthapa ▴ 60
0
votes
1
reply
665
views
Comment: C: Running Mauve on circular genomes
17 months ago by rthapa ▴ 60
2
votes
5
replies
772
views
bacterial genome assembly output from canu
bacteria genome assembly canu
updated 18 months ago by ▴ 130 • written 18 months ago by ▴ 60
1
vote
5
replies
690
views
de novo genome assembly of bacterial genome
assembly genome bacteria
updated 18 months ago by 34k • written 18 months ago by ▴ 60
0
votes
1
reply
772
views
Comment: C: bacterial genome assembly output from canu
18 months ago by rthapa ▴ 60
0
votes
1
reply
636
views
structural variants from mauve
structural variants mauve de novo assembly
updated 18 months ago by 20 • written 19 months ago by ▴ 60
0
votes
0
replies
690
views
Comment: C: de novo genome assembly of bacterial genome
18 months ago by rthapa ▴ 60
0
votes
1
reply
524
views
Comment: C: bacterial genome assembly with canu and alignment with reference genome with mau
updated 18 months ago by 117k • written 18 months ago by ▴ 60
0
votes
3
replies
524
views
bacterial genome assembly with canu and alignment with reference genome with mauve
Assembly canu mauve
18 months ago by rthapa ▴ 60
0
votes
0
replies
990
views
Comment: C: Are these good parameters for bacterial genome assembly?
19 months ago by rthapa ▴ 60
0
votes
0
replies
390
views
Comment: C: bacterial genome assembly with nano pore sequence data
20 months ago by rthapa ▴ 60
0
votes
0
replies
390
views
Comment: C: bacterial genome assembly with nano pore sequence data
20 months ago by rthapa ▴ 60
0
votes
3
replies
390
views
bacterial genome assembly with nano pore sequence data
assembly nanopore
20 months ago by rthapa ▴ 60
0
votes
0
replies
535
views
Vst estimation across different populations from copy number data
genome Copy number Vst
21 months ago by rthapa ▴ 60
1
vote
0
replies
523
views
Comment: C: Obtain gene names for the SNPs from GWAS result
21 months ago by rthapa ▴ 60
0
votes
1
reply
1.2k
views
Comment: C: mauve for contigs
21 months ago by rthapa ▴ 60
0
votes
1
reply
1.2k
views
Comment: C: mauve for contigs
21 months ago by rthapa ▴ 60
1
vote
5
replies
1.2k
views
mauve for contigs
genome mauve
updated 21 months ago by ▴ 340 • written 21 months ago by ▴ 60
0
votes
1
reply
379
views
Copy number variation data for population structure analysis
CNV
updated 21 months ago by ▴ 30 • written 21 months ago by ▴ 60
106 results • Page 1 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6