Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : questions
2
votes
4
replies
2.0k
views
Error converting from the ENTREZ GENE ID to GENE SYMBOLS
R org.Hs.eg.db affymetrix annotations
4.5 years ago by mohammedtoufiq91 ▴ 250
2
votes
1
reply
918
views
Unable to download the RNA-seq counts file using RnaSeqGeneEdgeRQL and HTTP status was '404 Not Found
RNA-Seq RnaSeqGeneEdgeRQL
updated 13 months ago by 43k • written 4.5 years ago by ▴ 250
1
vote
3
replies
874
views
Calculate p-values and corresponding FDR for all genes in the dataset
R package p-value ANOVA t-test
4.6 years ago by mohammedtoufiq91 ▴ 250
4
votes
4
replies
4.5k
views
Plotting linear trend using the ggplot2 for multiple columns elements
ggplot2 linear R save looping
updated 4.6 years ago by 87k • written 4.6 years ago by ▴ 250
10
votes
9
replies
1.5k
views
Merging two files based on a particular column
r
updated 13 months ago by 43k • written 4.6 years ago by ▴ 250
4
votes
4
replies
2.2k
views
Merging two files based on the identifier column (gene symbols)
gene-annotation R
updated 13 months ago by 43k • written 4.7 years ago by ▴ 250
7
votes
7
replies
1.0k
views
Are there any functions to subtract all features(rows) to a particular value(row) in the same data file?
R python normalization matrix
updated 4.7 years ago by 11k • written 4.7 years ago by ▴ 250
1
vote
1
reply
832
views
Support for import of custom matrix data in the ddCt R package
R ddct import analysis qrtpcr
4.7 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
1.1k
views
Sample grouping (phenoData) and visualization in R package- HtqPCR
R HTqPCR visualization phenoData grouping
4.7 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
1.3k
views
qRT-PCR data analysis queries
qrt-pcr normalization statistics analysis
4.9 years ago by mohammedtoufiq91 ▴ 250
0
votes
1
reply
981
views
Data integration of transcriptomics and Metagenomics data
metagenomics transcriptomics qRT-PCR integration
4.9 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
936
views
RT-qPCR: Calculation of Pairwise variations to determine the optimal number of reference genes
rt-qpcr reference genes normalization variation
5.1 years ago by mohammedtoufiq91 ▴ 250
3
votes
3
replies
1.4k
views
Extract Ensembl IDs column using a data file
annotations ensembl ID RNA-Seq
updated 5.1 years ago by ▴ 470 • written 5.1 years ago by ▴ 250
2
votes
3
replies
1.5k
views
Tools for qRT-PCR data analysis
Fold-Change Expression qRT-PCR
updated 10 months ago by 43k • written 5.2 years ago by ▴ 250
6
votes
2
replies
1.5k
views
Writing a batch script for analyzing RNA-Seq data
RNA-Seq quantification alignment
updated 17 days ago by 43k • written 5.2 years ago by ▴ 250
1
vote
3
replies
1.6k
views
Subsampling aligned SAM/BAM files for RNA-seq analysis
RNA-Seq subsampling downsampling SAM BAM
updated 5.2 years ago by 47k • written 5.2 years ago by ▴ 250
1
vote
2
replies
1.5k
views
Tools for Multi-omics analysis (RNA-Seq, Metagenomics and Metatranscriptomics data integration)
rna-seq Metagenomics Metatranscriptomics
5.2 years ago by mohammedtoufiq91 ▴ 250
2
votes
1
reply
873
views
Filter read level data after RNA-seq alignment
RNA-Seq Alignment Filter Reads
5.2 years ago by mohammedtoufiq91 ▴ 250
9
votes
13
replies
2.9k
views
qRT-PCR data analysis steps and workflow
qRT-PCR Reference genes Normalization DeltaCt FC
5.2 years ago by mohammedtoufiq91 ▴ 250
0
votes
3
replies
1.3k
views
Identify adapter position
RNA-Seq Adapter trimming
5.2 years ago by mohammedtoufiq91 ▴ 250
8
votes
7
replies
9.7k
views
Identify adapter sequences for trimming from Illumina paired end fastq files
RNA-Seq Adapter trimming QC Fastq
updated 5.2 years ago by 3.9k • written 5.2 years ago by ▴ 250
1
vote
2
replies
1.5k
views
RNA-seq analysis data analysis pipeline
RNA-Seq alignment quantification expression FC
updated 5.2 years ago by 5.3k • written 5.2 years ago by ▴ 250
5
votes
17
replies
4.6k
views
7 follow
Reduce number of reads from 100M to 50M in the sample from the existing RNA-Seq fastq files
RNA-Seq sequence fastq reads
updated 3.0 years ago by • 0 • written 5.2 years ago by ▴ 250
1
vote
4
replies
2.2k
views
Sub-sampling RNA-seq data
RNA-Seq fastq sam bam downsampling
5.2 years ago by mohammedtoufiq91 ▴ 250
10
votes
13
replies
2.2k
views
RNA-seq alignment against globin genes (HBA1, HBA1, and HBB)
RNA-Seq alignment
5.2 years ago by mohammedtoufiq91 ▴ 250
75 results • Page 2 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6