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Generating genesets matched for GC content and length
next-gen dna RNA-Seq dna-seq
updated 5.2 years ago by ▴ 30 • written 5.2 years ago by ▴ 50
1
vote
4
replies
3.2k
views
TPM for correlation between genes
rnaseq
updated 5.2 years ago by ▴ 40 • written 5.2 years ago by ▴ 50
0
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1
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3.2k
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Comment: C: TPM for correlation between genes
5.2 years ago by gradstudentNew ▴ 50
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2
replies
1.4k
views
PCA with split up chromosomes
PCA GWAS
5.3 years ago by gradstudentNew ▴ 50
0
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1
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1.3k
views
Comment: C: RNAseq cell line as a covariate
5.5 years ago by gradstudentNew ▴ 50
2
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3
replies
1.3k
views
RNAseq cell line as a covariate
rnaseq deseq2 cellline transcriptome
updated 5.5 years ago by 89k • written 5.5 years ago by ▴ 50
0
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1
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4.0k
views
Comment: C: Effect Allele Frequency in base summary statistics for PRSs calculation
5.6 years ago by gradstudentNew ▴ 50
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0
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754
views
Meta-analyzing DESeq2 output
rnaseq deseq2
5.6 years ago by gradstudentNew ▴ 50
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0
replies
1.1k
views
Comment: C: DESeq2 counts (inverse relationship)
5.6 years ago by gradstudentNew ▴ 50
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1
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1.1k
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Comment: C: DESeq2 counts (inverse relationship)
5.6 years ago by gradstudentNew ▴ 50
0
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6
replies
1.1k
views
DESeq2 counts (inverse relationship)
RNA-Seq counts
updated 5.6 years ago by 103k • written 5.6 years ago by ▴ 50
0
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0
replies
1.3k
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Comment: C: Complex DESeq2 Model with different gene dosages
5.6 years ago by gradstudentNew ▴ 50
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0
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1.3k
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Comment: C: Complex DESeq2 Model with different gene dosages
5.6 years ago by gradstudentNew ▴ 50
2
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4
replies
1.3k
views
Complex DESeq2 Model with different gene dosages
DESeq2 RNAseq Statistics Genes
5.6 years ago by gradstudentNew ▴ 50
12
votes
9
replies
11k
views
Extracting certain columns from VCF file
vcf genotype vcftools exome
updated 2.5 years ago by 45k • written 7.3 years ago by ▴ 50
0
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1
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1.4k
views
Complicated Multi-factor Differential Expression
RNAseq Multifactor Differential Expression Sleuth
updated 6.7 years ago by 8.3k • written 6.7 years ago by ▴ 50
3
votes
2
replies
4.6k
views
Keeping both A1/A2 in PLINK for assoc/logistic output
PLINK GWAS
updated 7.1 years ago by 11k • written 7.1 years ago by ▴ 50
0
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1
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2.0k
views
Best way to impute GWAS summary statistics
GWAS Summary Statistics imputation genotyping
7.2 years ago by gradstudentNew ▴ 50
1
vote
4
replies
12k
views
Extracting genotypes and filtering from a VCF file containing multiple exomes of families
DNA-seq genotype filter vcf exome
updated 7.3 years ago by 166k • written 7.3 years ago by ▴ 50
0
votes
1
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12k
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Comment: A: Extracting genotypes and filtering from a VCF file containing multiple exomes of
7.3 years ago by gradstudentNew ▴ 50
1
vote
1
reply
11k
views
Comment: C: Extracting certain columns from VCF file
7.3 years ago by gradstudentNew ▴ 50
0
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1
reply
11k
views
Comment: C: Extracting certain columns from VCF file
updated 7.3 years ago by 153k • written 7.3 years ago by ▴ 50
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