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Showing :
questions
0
votes
2
replies
876
views
removing adaptor
fastqc
updated 2.7 years ago by
GenoMax
141k • written 2.7 years ago by
prabin.dm
▴ 260
7
votes
2
replies
930
views
Why removing sample from one group in DESeqDataSet changes DGE of other two groups ?
RNA-Seq
DESeq2
updated 3.4 years ago by
Carlo Yague
8.7k • written 3.4 years ago by
prabin.dm
▴ 260
4
votes
4
replies
1.3k
views
Correlation vs differential expression testing
qpcr
updated 4.2 years ago by
n,n
▴ 360 • written 4.2 years ago by
prabin.dm
▴ 260
3
votes
1
reply
2.5k
views
Fail to delete temporary folder
star
RSEM
shell
4.9 years ago by
prabin.dm
▴ 260
3
votes
1
reply
2.2k
views
RSEM with STAR aligment
rsem
star
updated 5.1 years ago by
Mohammad Marhabaie
▴ 10 • written 5.4 years ago by
prabin.dm
▴ 260
1
vote
3
replies
4.8k
views
Batch correction: Before and After Visualisation
RNA-Seq
Combat
svaseq
DESeq2
5.1 years ago by
prabin.dm
▴ 260
0
votes
2
replies
3.7k
views
Do STAR genome index and RSEM reference need to be from same files?
RNA-Seq
RSEM
STAR
updated 5.4 years ago by
WouterDeCoster
47k • written 5.4 years ago by
prabin.dm
▴ 260
2
votes
4
replies
2.4k
views
STAR alignment error: quantmod not found
STAR
RNAseq
alignment
updated 5.4 years ago by
Devon Ryan
104k • written 5.4 years ago by
prabin.dm
▴ 260
0
votes
2
replies
1.4k
views
DGE Analysis between 3 conditions
RNA-Seq
DESeq
edgeR
5.4 years ago by
prabin.dm
▴ 260
15
votes
12
replies
9.5k
views
STAR alignment error: ERROR in input reads
fastq
STAR
RNA-Seq
5.4 years ago by
prabin.dm
▴ 260
0
votes
2
replies
1.3k
views
SimpleRleList to GRanges
ChIP-Seq
rtracklayer
5.5 years ago by
prabin.dm
▴ 260
4
votes
8
replies
3.8k
views
RSEM calculate expression troubleshoot
RNA-Seq
RSEM
5.8 years ago by
prabin.dm
▴ 260
2
votes
4
replies
2.3k
views
STAR index preparation fails
RNA-Seq
STAR
updated 5.8 years ago by
h.mon
35k • written 5.8 years ago by
prabin.dm
▴ 260
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