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0
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5
replies
1.6k
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Best input sample (CNV)
ChIP-Seq
updated 5.4 years ago by 20 • written 7.9 years ago by ▴ 600
0
votes
1
reply
2.1k
views
User guide of FunPat
FunPat
updated 5.6 years ago by • 0 • written 8.9 years ago by ▴ 600
4
votes
3
replies
3.4k
views
SNP zygosity from RNA-Seq data (BAM file)
SNP RNA-Seq
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 600
0
votes
1
reply
16k
views
Comment: C: Plotting Reads Around Tss
updated 5.7 years ago by 45k • written 11.9 years ago by ▴ 600
0
votes
2
replies
10k
views
Comment: C: How to normalise read count per gene
updated 5.8 years ago by 45k • written 9.7 years ago by ▴ 600
0
votes
0
replies
8.2k
views
Comment: C: Quantification of RNA-Seq bam files (STAR + HTSeq count)
updated 5.8 years ago by 45k • written 9.7 years ago by ▴ 600
0
votes
0
replies
12k
views
Comment: C: Matplotlib comprehensive chromosome drawing
6.2 years ago by ChIP ▴ 600
9
votes
7
replies
10k
views
Generate Random Genomic Regions
chip-seq
updated 6.6 years ago by ▴ 110 • written 12.1 years ago by ▴ 600
7
votes
4
replies
21k
views
How To Compute The Significance Of The Overlap Of The Size Of The Intersection Of Two Gene Sets.
pathway statistics
updated 3.2 years ago by 45k • written 12.1 years ago by ▴ 600
5
votes
7
replies
11k
views
Rcircos: Need Guidance
chip-seq r
updated 7.1 years ago by ▴ 110 • written 12.1 years ago by ▴ 600
0
votes
1
reply
1.6k
views
Comment: C: Best input sample (CNV)
7.9 years ago by ChIP ▴ 600
0
votes
0
replies
1.6k
views
Comment: C: Best input sample (CNV)
7.9 years ago by ChIP ▴ 600
7
votes
4
replies
4.9k
views
Downloading genomic interval for hg38
ChIP-Seq
updated 8.2 years ago by 36k • written 8.2 years ago by ▴ 600
0
votes
1
reply
2.1k
views
Comment: C: Binning the genomic regions and counting reads
8.5 years ago by ChIP ▴ 600
4
votes
3
replies
2.1k
views
Binning the genomic regions and counting reads
Bed tool bash
updated 8.5 years ago by ★ 3.5k • written 8.5 years ago by ▴ 600
3
votes
3
replies
2.1k
views
Identifying DEG from time course data without condition
DESeq EdgeR RNA-Seq
updated 8.8 years ago by 8.4k • written 8.8 years ago by ▴ 600
0
votes
0
replies
2.4k
views
Comment: C: Ensembl ID conversion for a specific build
8.9 years ago by ChIP ▴ 600
4
votes
6
replies
2.4k
views
Ensembl ID conversion for a specific build
GeneID-Conversion Ensembl
updated 8.9 years ago by ★ 5.2k • written 8.9 years ago by ▴ 600
0
votes
0
replies
2.5k
views
Comment: C: Identification of 3'UTR of a gene not yet discovered in pig
8.9 years ago by ChIP ▴ 600
0
votes
7
replies
2.5k
views
Identification of 3'UTR of a gene not yet discovered in pig
RNA-Seq ChIP-Seq Sequence-Analysis Genome-Analysis
updated 8.9 years ago by ▴ 610 • written 8.9 years ago by ▴ 600
0
votes
1
reply
2.5k
views
Comment: C: Identification of 3'UTR of a gene not yet discovered in pig
8.9 years ago by ChIP ▴ 600
19
votes
5
replies
27k
views
Hypergeometric Test On Gene Set
r statistics
updated 2.5 years ago by 45k • written 11.7 years ago by ▴ 600
2
votes
3
replies
8.2k
views
Quantification of RNA-Seq bam files (STAR + HTSeq count)
RNA-Seq HTSeq_count STAR
updated 3.1 years ago by 45k • written 9.7 years ago by ▴ 600
3
votes
6
replies
10k
views
How to normalise read count per gene
RNA-Seq
updated 3.1 years ago by 45k • written 9.7 years ago by ▴ 600
4
votes
5
replies
5.7k
views
Heatmap of Differentially Expressed Genes
RNA-Seq R heatmap
updated 3.1 years ago by 45k • written 9.8 years ago by ▴ 600
0
votes
1
reply
5.7k
views
Comment: C: Heatmap of Differentially Expressed Genes
9.8 years ago by ChIP ▴ 600
0
votes
0
replies
2.0k
views
Practical approaches to constructing regulatory networks using NGS data (ChIP and/or RNA Seq)
RNA-Seq ChIP-Seq Network Cytoscape
10.2 years ago by ChIP ▴ 600
10
votes
7
replies
8.5k
views
To get genes for each clusters from heatmap
heatmap R
updated 2.8 years ago by 45k • written 10.2 years ago by ▴ 600
0
votes
0
replies
8.5k
views
Comment: C: To get genes for each clusters from heatmap
10.2 years ago by ChIP ▴ 600
0
votes
0
replies
5.5k
views
Comment: Comment: Heatmap to identify differential regions between 2 groups
updated 3.5 years ago by 45k • written 10.2 years ago by ▴ 600
0
votes
1
reply
5.5k
views
Comment: Comment: Heatmap to identify differential regions between 2 groups
updated 3.5 years ago by 45k • written 10.2 years ago by ▴ 600
0
votes
1
reply
2.0k
views
Suggestion Needed For Mirna Expression Data
mirna gene-expression
updated 10.3 years ago by 20 • written 13.0 years ago by ▴ 600
2
votes
6
replies
4.1k
views
Paired end data loaded into geo as single end runs ... How to extraxct the data
Samtools RNA-Seq Picard
updated 2.7 years ago by 45k • written 10.8 years ago by ▴ 600
14
votes
18
replies
16k
views
10 follow
Plotting Reads Around Tss
chip-seq
updated 2.7 years ago by 45k • written 11.9 years ago by ▴ 600
3
votes
3
replies
9.5k
views
Trimming read length & quality in a FASTQ file
RNA-Seq next-gen
updated 2.6 years ago by 45k • written 10.4 years ago by ▴ 600
1
vote
2
replies
1.7k
views
Can a bioinformatics analysis based on 2 patient samples be published
next-gen Publications
updated 2.6 years ago by 45k • written 10.4 years ago by ▴ 600
14
votes
14
replies
5.5k
views
Heatmap to identify differential regions between 2 groups
heatmap R
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 600
0
votes
1
reply
2.9k
views
Comment: Comment: Converting Solexa eland to Solexa fastq
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 600
1
vote
4
replies
2.9k
views
Converting Solexa eland to Solexa fastq
perl python awk R
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 600
11
votes
7
replies
14k
views
List Of Genes Involved In Metabolic Pathway
pathway enrichment
updated 3.5 years ago by 45k • written 12.3 years ago by ▴ 600
0
votes
0
replies
4.1k
views
Comment: Comment: Paired end data loaded into geo as single end runs ... How to extraxct the data
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 600
0
votes
1
reply
4.1k
views
Comment: Comment: Paired end data loaded into geo as single end runs ... How to extraxct the data
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 600
1
vote
1
reply
3.9k
views
Comment: Comment: Error while converting FastqToSam
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 600
4
votes
3
replies
3.9k
views
Error while converting FastqToSam
Fastq Bam Picard
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 600
1
vote
0
replies
5.5k
views
Comment: Comment: Heatmap to identify differential regions between 2 groups
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 600
0
votes
0
replies
5.5k
views
Comment: Comment: Heatmap to identify differential regions between 2 groups
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 600
0
votes
0
replies
10k
views
Comment: Comment: Transforming Beta values to M values
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 600
4
votes
2
replies
10k
views
Transforming Beta values to M values
DNA-Methylation
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 600
0
votes
0
replies
2.5k
views
Difference between the PFam domain information from UCSC and PDB site
Protein domains SNPs
updated 4.5 years ago by 45k • written 10.8 years ago by ▴ 600
5
votes
11
replies
10.0k
views
Copy Number Variation from paired end RNA-Seq data
SNP RNA-Seq CNV
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 600
100 results • Page 1 of 2
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