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103
votes
34
replies
125k
views
23 follow
How To Split A Bam File By Chromosome
bam
updated 15 months ago by 45k • written 12.9 years ago by ▴ 390
13
votes
10
replies
44k
views
7 follow
How To Uncompress The 1000 Genome Vcf.Gz File
updated 3.6 years ago by • 0 • written 12.4 years ago by ▴ 390
2
votes
3
replies
8.2k
views
Bwa Mismatches And Seed Length
bwa
updated 6.4 years ago by 20 • written 12.5 years ago by ▴ 390
0
votes
1
reply
2.1k
views
Bedgraph Signal Along Introns
updated 8.0 years ago by 20 • written 12.8 years ago by ▴ 390
0
votes
5
replies
4.1k
views
Tophat2, Strand-Specific And Genes.Gtf
tophat2
updated 8.7 years ago by 20 • written 12.2 years ago by ▴ 390
0
votes
2
replies
1.9k
views
Make Paired File Task-Scripture
updated 9.7 years ago by 20 • written 12.6 years ago by ▴ 390
3
votes
8
replies
3.9k
views
Write Diffgenes/Diffgeneids In A Tab File
cummerbund
updated 2.2 years ago by 45k • written 12.7 years ago by ▴ 390
2
votes
0
replies
2.1k
views
Can Trinity (de novo) be coupled to Tophat?
alignment Assembly
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 390
4
votes
5
replies
7.1k
views
Cummerbund
updated 10.9 years ago by ★ 1.5k • written 12.7 years ago by ▴ 390
2
votes
3
replies
2.9k
views
Comparative Snp Analysis
varscan bedtools intersect
updated 11.2 years ago by 20 • written 12.3 years ago by ▴ 390
13
votes
4
replies
7.0k
views
Extract Alu Repeats
repeats
updated 11.2 years ago by ▴ 10 • written 12.4 years ago by ▴ 390
0
votes
2
replies
6.1k
views
Microrna Reads Alignment
updated 11.2 years ago by 8.3k • written 12.3 years ago by ▴ 390
0
votes
6
replies
5.5k
views
E-Box Promoters In Gene List
motif enrichment
updated 11.4 years ago by ★ 1.2k • written 11.4 years ago by ▴ 390
0
votes
1
reply
3.7k
views
Strand Specific Tophat Output
updated 11.6 years ago by 20 • written 12.0 years ago by ▴ 390
0
votes
0
replies
13k
views
Answer: A: Vcf File --> Gene/Protein Mutation Information
11.7 years ago by GPR ▴ 390
0
votes
1
reply
3.6k
views
Cuffmerge Error
11.8 years ago by GPR ▴ 390
1
vote
0
replies
2.3k
views
A-To-G Rna-Editing Vcf File Repository
vcf
12.2 years ago by GPR ▴ 390
0
votes
0
replies
5.6k
views
Comment: C: Aligning Paired-End Reads In Single-End Mode
12.2 years ago by GPR ▴ 390
5
votes
2
replies
5.6k
views
Aligning Paired-End Reads In Single-End Mode
paired-end
updated 12.2 years ago by ★ 2.9k • written 12.2 years ago by ▴ 390
0
votes
0
replies
5.7k
views
Comment: C: Can Tophat Be Used For Mapping Dna-Seq (Whole Genome) Data
12.2 years ago by GPR ▴ 390
0
votes
0
replies
4.2k
views
Comment: C: Gatk-2.3-9 And Input File Format
12.2 years ago by GPR ▴ 390
1
vote
2
replies
4.2k
views
Gatk-2.3-9 And Input File Format
gatk bam
updated 12.2 years ago by ★ 1.2k • written 12.2 years ago by ▴ 390
1
vote
2
replies
11k
views
Visualizing Vcf Files With Igv
vcf igv
updated 12.2 years ago by ▴ 630 • written 12.2 years ago by ▴ 390
0
votes
0
replies
9.8k
views
Comment: C: Problems With Chromosome Ordering When Running The Gatk Indelrealigner
12.2 years ago by GPR ▴ 390
2
votes
3
replies
9.8k
views
Problems With Chromosome Ordering When Running The Gatk Indelrealigner
gatk
updated 12.2 years ago by ★ 1.2k • written 12.2 years ago by ▴ 390
0
votes
0
replies
5.2k
views
Comment: C: Cummerbund Gene Tracking
12.2 years ago by GPR ▴ 390
0
votes
1
reply
5.9k
views
Comment: C: Varscan2 Strandness Filter
12.2 years ago by GPR ▴ 390
0
votes
5
replies
5.9k
views
Varscan2 Strandness Filter
strand
updated 12.2 years ago by 27k • written 12.2 years ago by ▴ 390
0
votes
0
replies
5.9k
views
Comment: C: Varscan2 Strandness Filter
12.2 years ago by GPR ▴ 390
0
votes
0
replies
4.1k
views
Comment: C: Tophat2, Strand-Specific And Genes.Gtf
12.2 years ago by GPR ▴ 390
0
votes
0
replies
4.1k
views
Comment: C: Tophat2, Strand-Specific And Genes.Gtf
12.2 years ago by GPR ▴ 390
0
votes
0
replies
3.4k
views
Comment: C: Problems Extracting Non-Snps From A Vcf File
12.2 years ago by GPR ▴ 390
9
votes
7
replies
3.4k
views
Problems Extracting Non-Snps From A Vcf File
varscan bedtools dbsnp
updated 12.2 years ago by 102k • written 12.3 years ago by ▴ 390
1
vote
4
replies
3.4k
views
Appending Gene Ids On Rna-Editing Sites
gene id
updated 12.2 years ago by ▴ 140 • written 12.3 years ago by ▴ 390
4
votes
3
replies
3.6k
views
Varscan Snp Strand Information
varscan snp
updated 12.2 years ago by ▴ 140 • written 12.3 years ago by ▴ 390
0
votes
1
reply
3.5k
views
Varscan Mpileup2Snp Output Missing Varfreq Values
varscan mpileup
updated 12.2 years ago by ▴ 140 • written 12.3 years ago by ▴ 390
1
vote
1
reply
3.4k
views
Comment: C: Problems Extracting Non-Snps From A Vcf File
12.3 years ago by GPR ▴ 390
1
vote
0
replies
4.0k
views
Comment: C: Gff2Bed.Py Stops
12.3 years ago by GPR ▴ 390
2
votes
3
replies
4.0k
views
Gff2Bed.Py Stops
12.3 years ago by GPR ▴ 390
0
votes
0
replies
3.4k
views
Comment: C: Appending Gene Ids On Rna-Editing Sites
12.3 years ago by GPR ▴ 390
0
votes
0
replies
3.6k
views
Comment: C: Varscan Snp Strand Information
12.3 years ago by GPR ▴ 390
0
votes
0
replies
3.3k
views
Comment: C: Igvtools Index "Error: For Input String: "Pass""
12.3 years ago by GPR ▴ 390
0
votes
2
replies
3.3k
views
Igvtools Index "Error: For Input String: "Pass""
index
updated 12.3 years ago by 166k • written 12.3 years ago by ▴ 390
0
votes
0
replies
2.9k
views
Comment: C: Comparative Snp Analysis
12.3 years ago by GPR ▴ 390
0
votes
0
replies
3.5k
views
Comment: C: Bowtie Sam Output Not Parsed
12.3 years ago by GPR ▴ 390
0
votes
0
replies
4.4k
views
Comment: C: Blat Input From Vcf File
12.3 years ago by GPR ▴ 390
0
votes
2
replies
3.5k
views
Bowtie Sam Output Not Parsed
bowtie samtools
12.3 years ago by GPR ▴ 390
0
votes
1
reply
6.2k
views
Comment: C: Bowtie Output "Not Enough Fields"
12.3 years ago by GPR ▴ 390
0
votes
1
reply
6.2k
views
Comment: C: Bowtie Output "Not Enough Fields"
12.3 years ago by GPR ▴ 390
0
votes
0
replies
4.4k
views
Comment: C: Blat Input From Vcf File
12.3 years ago by GPR ▴ 390
103 results • Page 1 of 3
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