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3.9k
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Comment: Comment: Extract CDS from maker gff
2.5 years ago by mrmrwinter ▴ 30
0
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0
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823
views
Comment: Comment: Indel size seemingly capped by software?
3.2 years ago by mrmrwinter ▴ 30
0
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1
reply
823
views
Indel size seemingly capped by software?
indels calling nucmer variant genome alignment
3.2 years ago by mrmrwinter ▴ 30
0
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1
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3.2k
views
Comment: Comment: Keep lines that dont match awk pattern, edit those that do
3.5 years ago by mrmrwinter ▴ 30
3
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7
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3.2k
views
Keep lines that dont match awk pattern, edit those that do
bash awk sed
updated 3.5 years ago by 21k • written 3.5 years ago by ▴ 30
0
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1
reply
3.2k
views
Comment: Comment: Keep lines that dont match awk pattern, edit those that do
3.5 years ago by mrmrwinter ▴ 30
0
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0
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2.5k
views
Comment: Comment: Continuing issues with MAKER and SNAP
3.6 years ago by mrmrwinter ▴ 30
0
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0
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2.6k
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Comment: Comment: Error when trying to convert exonerate output to gff3
3.6 years ago by mrmrwinter ▴ 30
0
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0
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2.5k
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Comment: Comment: Continuing issues with MAKER and SNAP
3.6 years ago by mrmrwinter ▴ 30
0
votes
0
replies
643
views
linking exons and introns when plotting from genbank file?
exons genbank plotting dna_features_viewer introns
3.6 years ago by mrmrwinter ▴ 30
0
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0
replies
2.0k
views
Comment: Comment: Non-standard Genbank format
3.6 years ago by mrmrwinter ▴ 30
0
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1
reply
2.5k
views
Comment: Comment: Continuing issues with MAKER and SNAP
3.6 years ago by mrmrwinter ▴ 30
2
votes
6
replies
2.5k
views
Continuing issues with MAKER and SNAP
SNAP zff gff MAKER annotation
3.6 years ago by mrmrwinter ▴ 30
0
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0
replies
2.0k
views
Comment: Comment: Non-standard Genbank format
3.6 years ago by mrmrwinter ▴ 30
0
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0
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2.9k
views
Answer: Answer: maker2zff error on run
3.6 years ago by mrmrwinter ▴ 30
0
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2
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2.0k
views
Comment: Comment: Non-standard Genbank format
3.6 years ago by mrmrwinter ▴ 30
0
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6
replies
2.0k
views
Non-standard Genbank format
biopython ugene genbank
3.6 years ago by mrmrwinter ▴ 30
1
vote
1
reply
1.9k
views
Colour tip labels in a tree based on wildcard/expression using ggtree
ggtree colour R phylogeny dendrogram
updated 4.6 years ago by 45k • written 4.6 years ago by ▴ 30
11
votes
11
replies
7.1k
views
8 follow
Forum: Best open source genome browser in 2020
genome-browser genomics
updated 2.5 years ago by 45k • written 4.9 years ago by ▴ 30
0
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0
replies
3.4k
views
Comment: C: Combining nanopore libraries
4.9 years ago by mrmrwinter ▴ 30
2
votes
4
replies
3.4k
views
Combining nanopore libraries
promethion nanopore Assembly
3.6 years ago by mrmrwinter ▴ 30
1
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0
replies
7.1k
views
Comment: Comment: Best open source genome browser in 2020
3.7 years ago by mrmrwinter ▴ 30
0
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0
replies
1.2k
views
Which ete3 format to parse a newick file with concordance values?
iqtree phylogenetics concordance factors newick
5.2 years ago by mrmrwinter ▴ 30
0
votes
1
reply
1.1k
views
Allow for failed wildcards in Snakemake workflow
snakemake python wildcards
5.2 years ago by mrmrwinter ▴ 30
0
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1
reply
1.5k
views
Comment: C: Order assignment given family and genus level in R
5.4 years ago by mrmrwinter ▴ 30
1
vote
4
replies
1.5k
views
Order assignment given family and genus level in R
r taxomonic assignment transformation
5.4 years ago by mrmrwinter ▴ 30
0
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0
replies
4.9k
views
Comment: C: Less and less genes predicted with each iteration of SNAP/MAKER
5.5 years ago by mrmrwinter ▴ 30
0
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1
reply
4.9k
views
Comment: C: Less and less genes predicted with each iteration of SNAP/MAKER
5.5 years ago by mrmrwinter ▴ 30
3
votes
15
replies
4.9k
views
Less and less genes predicted with each iteration of SNAP/MAKER
maker annotation snap gene prediction genomics
updated 4.1 years ago by ▴ 30 • written 5.5 years ago by ▴ 30
0
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0
replies
4.6k
views
Comment: C: If loop in snakemake
5.6 years ago by mrmrwinter ▴ 30
0
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0
replies
4.6k
views
Comment: C: If loop in snakemake
5.6 years ago by mrmrwinter ▴ 30
0
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1
reply
4.6k
views
Comment: C: If loop in snakemake
5.6 years ago by mrmrwinter ▴ 30
0
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0
replies
4.6k
views
Comment: C: If loop in snakemake
5.6 years ago by mrmrwinter ▴ 30
3
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9
replies
4.6k
views
If loop in snakemake
shell snakemake if else loop
5.6 years ago by mrmrwinter ▴ 30
0
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0
replies
2.9k
views
Comment: C: Counting CDS's in Maker output
5.6 years ago by mrmrwinter ▴ 30
0
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0
replies
2.9k
views
Comment: C: Counting CDS's in Maker output
5.6 years ago by mrmrwinter ▴ 30
0
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2
replies
2.9k
views
Comment: C: Counting CDS's in Maker output
5.6 years ago by mrmrwinter ▴ 30
0
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0
replies
1.2k
views
Answer: A: I want to assembly all the reads at ones in linux
5.6 years ago by mrmrwinter ▴ 30
0
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1
reply
2.9k
views
Comment: C: Counting CDS's in Maker output
5.6 years ago by mrmrwinter ▴ 30
0
votes
1
reply
2.9k
views
Comment: C: Counting CDS's in Maker output
5.6 years ago by mrmrwinter ▴ 30
0
votes
1
reply
2.9k
views
Comment: C: Counting CDS's in Maker output
5.6 years ago by mrmrwinter ▴ 30
5
votes
11
replies
2.9k
views
Counting CDS's in Maker output
annotation maker cds est gene prediction
updated 5.6 years ago by 9.3k • written 5.6 years ago by ▴ 30
0
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1
reply
1.1k
views
Comment: C: If/Else loop for grep count
5.6 years ago by mrmrwinter ▴ 30
1
vote
4
replies
1.1k
views
If/Else loop for grep count
grep if else python snakemake
updated 5.6 years ago by 166k • written 5.6 years ago by ▴ 30
3
votes
2
replies
1.2k
views
Which format to download ESTs for annotation with MAKER?
genome annotation gene prediction
updated 5.6 years ago by 9.3k • written 5.6 years ago by ▴ 30
0
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0
replies
934
views
Comment: C: How to omit certain results from GenBank search?
5.6 years ago by mrmrwinter ▴ 30
1
vote
2
replies
934
views
How to omit certain results from GenBank search?
genbank omission annotation protein database
5.6 years ago by mrmrwinter ▴ 30
3
votes
2
replies
2.8k
views
Error: NCBI C++ Exception - Invalid choice selection: NCBI-Seqalign::Score.value.real
blast ncbi terminal software error seqalign
updated 4.1 years ago by • 0 • written 6.0 years ago by ▴ 30
0
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0
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12k
views
Comment: C: remote blast requires installation of taxdb database
6.0 years ago by mrmrwinter ▴ 30
0
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0
replies
3.1k
views
Comment: C: NCBI blastp fails with "Invalid choice selection: NCBI-Seqalign::Score.value.rea
6.0 years ago by mrmrwinter ▴ 30
50 results • Page 1 of 1
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