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Using Principal Components may muddle the detecting power of a GWAS?
q-value covariates genomic-inflation pca gwas
updated 4 weeks ago by ▴ 480 • written 4 weeks ago by • 0
0
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0
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178
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Significant SNPs with the same effect in FarmCPU
effect-size gwas FarmCPU likage-disequilibrium
5 weeks ago by AndrMod • 0
0
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1
reply
708
views
GWAS on traits non-normally distributed
normality GWAS phenotypes
updated 8 months ago by 89k • written 9 months ago by • 0
0
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0
replies
337
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Outputs from FarmCPU (rMPV package)
R FarmCPU GWAS
14 months ago by AndrMod • 0
0
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0
replies
705
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Genetic distance in cM from VCF of non-reference species to run Beagle
plink beagle vcf
updated 20 months ago by 45k • written 20 months ago by • 0
0
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2
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1.4k
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Comment: Comment: Subsetting Vcf based on CHROM and POSS
3.0 years ago by AndrMod • 0
0
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5
replies
1.4k
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Subsetting Vcf based on CHROM and POSS
subsetting vcfR vcf
updated 3.0 years ago by 166k • written 3.0 years ago by • 0
0
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1
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2.5k
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Comment: Comment: Mince a vcf into n bins of a given range
3.3 years ago by AndrMod • 0
0
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6
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2.5k
views
Mince a vcf into n bins of a given range
vcf binning
updated 3.3 years ago by 36k • written 3.3 years ago by • 0
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0
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2.5k
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Comment: Comment: Mince a vcf into n bins of a given range
3.3 years ago by AndrMod • 0
0
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2
replies
1.2k
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Comment: Comment: Modifying Vcf field into R
3.6 years ago by AndrMod • 0
0
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4
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1.2k
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Modifying Vcf field into R
R vcf replacement
updated 3.6 years ago by 12k • written 3.6 years ago by • 0
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0
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2.0k
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Comment: Comment: Subset a Vcf
3.6 years ago by AndrMod • 0
0
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0
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2.0k
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Comment: Comment: Subset a Vcf
3.6 years ago by AndrMod • 0
0
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0
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2.0k
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Comment: Comment: Subset a Vcf
3.6 years ago by AndrMod • 0
0
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2
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2.0k
views
Comment: Comment: Subset a Vcf
3.6 years ago by AndrMod • 0
4
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8
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2.0k
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Subset a Vcf
vcf vcftools
3.6 years ago by AndrMod • 0
0
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0
replies
1.6k
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Comment: Comment: Issue installing Plink
3.9 years ago by AndrMod • 0
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0
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1.6k
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Comment: Comment: Issue installing Plink
3.9 years ago by AndrMod • 0
0
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1
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1.6k
views
Comment: Comment: Issue installing Plink
3.9 years ago by AndrMod • 0
2
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5
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1.6k
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Issue installing Plink
Plink
3.9 years ago by AndrMod • 0
0
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0
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2.7k
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Comment: C: Can't find fstat() and pairwise.fstat()
4.6 years ago by AndrMod • 0
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2
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2.7k
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Comment: C: Can't find fstat() and pairwise.fstat()
4.6 years ago by AndrMod • 0
1
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5
replies
2.7k
views
Can't find fstat() and pairwise.fstat()
R snp
updated 4.6 years ago by ★ 3.0k • written 4.6 years ago by • 0
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