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0
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2
replies
3.5k
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Best strategy to determine the metabolic capabilities of a bacterial genome
RNA-Seq pathway genomics
updated 2.3 years ago by 43k • written 9.6 years ago by ▴ 570
1
vote
1
reply
3.2k
views
RNA-seq reads mapping to paralogs with high MAPQ. How to ensure this?
paralogs BWA RNA-Seq MAPQ
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 570
1
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2
replies
2.0k
views
How To Get Conservation Of Vaccine Candidates Between Hundreds Of Bacterial Strains?
homology blast bacteria phylogenetics
updated 9.5 years ago by ▴ 280 • written 10.4 years ago by ▴ 570
3
votes
6
replies
3.9k
views
Close Bacterial Draft Genome With Other Draft Genome
genomics assembly
updated 2.3 years ago by 43k • written 10.1 years ago by ▴ 570
0
votes
5
replies
3.9k
views
Normalized coverage histograms for selected chromosome region
coverage RNA-Seq
updated 2.3 years ago by 43k • written 9.7 years ago by ▴ 570
3
votes
4
replies
6.0k
views
HTSeq count (reverse count with paired-end data)
HTSeq RNA-Seq
updated 2.5 years ago by 43k • written 9.9 years ago by ▴ 570
5
votes
6
replies
7.5k
views
R1 R2 orientation (RNA-seq)
RNA-seq HTSeq pipeline bash
updated 2.5 years ago by 43k • written 9.9 years ago by ▴ 570
0
votes
4
replies
2.8k
views
Low number of reads mapped, looking for a relaxed paired-end Illumina mapper
SNP RNA-Seq Illumina
updated 2.5 years ago by 43k • written 9.9 years ago by ▴ 570
4
votes
4
replies
4.0k
views
R1 R2 orientation
RNA-Seq
updated 2.5 years ago by 43k • written 9.9 years ago by ▴ 570
2
votes
5
replies
3.6k
views
Should I merge bacterial RNA-seq paired-end data?
paired-end bacteria RNA-Seq
updated 2.5 years ago by 43k • written 9.9 years ago by ▴ 570
6
votes
2
replies
2.4k
views
How much 400 Million reads cost?
rnaseq illumina
updated 2.6 years ago by 43k • written 10.0 years ago by ▴ 570
1
vote
2
replies
2.1k
views
Retrieve GO terms for all completed genomes in GenBank
bacteria uniprot go
updated 2.6 years ago by 43k • written 10.0 years ago by ▴ 570
0
votes
0
replies
1.6k
views
Low Mge Identities Vs Aclame, The Norm?
genomics evolution
updated 10.0 years ago by 20 • written 10.2 years ago by ▴ 570
0
votes
2
replies
2.3k
views
Creating a list of Haemophilus housekeeping genes
bacteria housekeeping
updated 2.6 years ago by 43k • written 10.1 years ago by ▴ 570
5
votes
6
replies
5.6k
views
Too Many Deg With EdgeR Output?
edger rna-seq bacteria ion-torrent
10.1 years ago by biotech ▴ 570
3
votes
4
replies
6.8k
views
Get Galaxy Tool Shed Work On Local Instance
galaxy
updated 10.1 years ago by ▴ 670 • written 10.1 years ago by ▴ 570
3
votes
6
replies
3.7k
views
For Rnaseq Enrichment Analysis What Are Some Gene Ontology (Go) Alternatives?
rnaseq enrichment
updated 10.1 years ago by 5.1k • written 10.1 years ago by ▴ 570
0
votes
0
replies
1.8k
views
Any Cog Enrichment Tools For Non-Model Organisms?
enrichment bioperl biopython
10.1 years ago by biotech ▴ 570
2
votes
6
replies
5.2k
views
Parsing Genbank File: Get Locus Tag Vs Product
bioperl biopython
updated 10.2 years ago by 6.0k • written 10.2 years ago by ▴ 570
0
votes
3
replies
4.0k
views
What Do You Think About This Correlation Between Qpcr And Rna-Seq?
rnaseq
updated 10.3 years ago by 8.2k • written 10.3 years ago by ▴ 570
22
votes
7
replies
3.9k
views
How Easy Would Be For Google To Find Unpublished Interesting Research Results?
network
updated 10.5 years ago by 11k • written 10.5 years ago by ▴ 570
3
votes
11
replies
4.3k
views
Retrieve The Coding Amino-Acid When There Is Certain Pattern In A Coding Dna Sequence
amino-acids script perl
10.5 years ago by biotech ▴ 570
2
votes
0
replies
3.6k
views
How To Compare Go Term Lists And Create Matching Network?
cytoscape bacteria network
10.5 years ago by biotech ▴ 570
0
votes
2
replies
2.7k
views
New Go Terms After Topgo Enrichment?
rna-seq enrichment
10.5 years ago by biotech ▴ 570
0
votes
3
replies
2.6k
views
Ncbi Standards For Genome Annotation After Contig Reduction
genbank contigs annotation rna-seq
10.5 years ago by biotech ▴ 570
1
vote
17
replies
7.3k
views
Is This A Valid Gff3 File For Htseq?
gff3 rnaseq bacteria
10.5 years ago by biotech ▴ 570
1
vote
1
reply
3.0k
views
How To Create A Gff3 File From A Transcript Collection Created With Trinity (De Novo Bacterial Rna-Seq)
bacteria rna-seq gff3 differential-expression
updated 11.1 years ago by 100k • written 11.1 years ago by ▴ 570
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