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Comment: C: Convert CSV to PED
3.4 years ago by Dhara Awasthi ▴ 40
0
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1
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4.4k
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Comment: C: Convert CSV to PED
3.5 years ago by Dhara Awasthi ▴ 40
0
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0
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731
views
How to apply Robust PCA to SNP (HapMap) data?
rpca robustpca hapmap3
3.5 years ago by Dhara Awasthi ▴ 40
0
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1
reply
913
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Comment: C: problem installing HapMap package in python
3.5 years ago by Dhara Awasthi ▴ 40
0
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3
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913
views
problem installing HapMap package in python
python HapMap3
3.5 years ago by Dhara Awasthi ▴ 40
0
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1
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4.4k
views
Comment: C: Convert CSV to PED
3.5 years ago by Dhara Awasthi ▴ 40
0
votes
1
reply
4.4k
views
Comment: C: Convert CSV to PED
3.5 years ago by Dhara Awasthi ▴ 40
0
votes
1
reply
4.4k
views
Comment: C: Convert CSV to PED
3.5 years ago by Dhara Awasthi ▴ 40
0
votes
1
reply
4.4k
views
Comment: C: Convert CSV to PED
3.5 years ago by Dhara Awasthi ▴ 40
0
votes
1
reply
4.4k
views
Comment: C: Convert CSV to PED
updated 3.5 years ago by 87k • written 3.5 years ago by ▴ 40
0
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1
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4.4k
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Comment: C: Convert CSV to PED
3.5 years ago by Dhara Awasthi ▴ 40
6
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13
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4.4k
views
Convert CSV to PED
gwas plink
3.5 years ago by Dhara Awasthi ▴ 40
0
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0
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520
views
calculate mutual information between pairs of SNPs
feature selection mutual information
3.5 years ago by Dhara Awasthi ▴ 40
0
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0
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660
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SNP encoding for classification
SNP encoding Machine Learning
3.5 years ago by Dhara Awasthi ▴ 40
0
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0
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1.9k
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Comment: Comment: Why Plink stoped analyzing without make a new PED file and MAP file?
updated 20 months ago by 43k • written 3.5 years ago by ▴ 40
0
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0
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694
views
Help with PLINK
PLINK GWAS
3.5 years ago by Dhara Awasthi ▴ 40
2
votes
1
reply
1.6k
views
PLINK basic command line usage
PLINK
updated 3.5 years ago by 11k • written 3.5 years ago by ▴ 40
1
vote
1
reply
939
views
Annotated txt and csv files show empty columns in SIFT,Polyphen2, Mutation tester and other columns
annotation annovar
3.5 years ago by Dhara Awasthi ▴ 40
0
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1
reply
872
views
Comment: C: summarize_annovar perl script download
3.6 years ago by Dhara Awasthi ▴ 40
2
votes
3
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872
views
summarize_annovar perl script download
annovar annotation
updated 3.6 years ago by 43k • written 3.6 years ago by ▴ 40
0
votes
1
reply
775
views
Empty avinput files corresponding to multisamples in ANNOVAR
annovar annotation 1000g
3.6 years ago by Dhara Awasthi ▴ 40
3
votes
1
reply
2.0k
views
Annotate multiple sample vcf files at once using ANNOVAR
annovar 1000g annotation
updated 3.6 years ago by 87k • written 3.6 years ago by ▴ 40
0
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1
reply
1.7k
views
Comment: C: table_annovar.pl script shows error
3.6 years ago by Dhara Awasthi ▴ 40
0
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3
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1.7k
views
table_annovar.pl script shows error
annovar 1000g annotation
updated 3.6 years ago by 87k • written 3.6 years ago by ▴ 40
0
votes
0
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948
views
Comment: C: extract vcf files of each individuals from ALL.chr3.phase1_release_v3.20101123.s
3.6 years ago by Dhara Awasthi ▴ 40
0
votes
3
replies
948
views
extract vcf files of each individuals from ALL.chr3.phase1_release_v3.20101123.snps_indels_svs.genotypes.vcf.gz using command
vcf annovar annotation 1000g
3.6 years ago by Dhara Awasthi ▴ 40
0
votes
1
reply
687
views
annovar continues to use hg18 version despite using buildver hg19 argument
annovar annotation 1000g
3.6 years ago by Dhara Awasthi ▴ 40
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