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115
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Error while loading model of Spatial data deconvolution using cell2location
Python cell2location
updated 4 days ago by 43k • written 4 days ago by ▴ 50
7
votes
4
replies
3.3k
views
Running python script in slurm using conda environment
slurm python conda
updated 7 months ago by • 0 • written 8 months ago by ▴ 50
1
vote
3
replies
1.9k
views
Converting hdf5 file to loom file
single-cell python scvelo RNA
updated 7 months ago by • 0 • written 3.0 years ago by ▴ 50
0
votes
0
replies
374
views
Error while mapping data to reference using Symphony
Symphony seurat Mapping R
10 months ago by sidrah.maryam ▴ 50
0
votes
0
replies
610
views
Converting rds file to h5ad and saving raw counts as X
R seurat
updated 11 months ago by 11k • written 11 months ago by ▴ 50
4
votes
2
replies
1.5k
views
Plotting heat map with significance based on multiple columns
R Python Heatmap
updated 11 months ago by 4.6k • written 11 months ago by ▴ 50
0
votes
3
replies
1.4k
views
Issue in installing any package in R
BiocManager seurat R
updated 13 months ago by ★ 1.8k • written 13 months ago by ▴ 50
0
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0
replies
1.4k
views
Comment: Comment: Issue in installing any package in R
12 months ago by sidrah.maryam ▴ 50
0
votes
1
reply
1.5k
views
Comment: Comment: Error while using rpy2
15 months ago by sidrah.maryam ▴ 50
0
votes
3
replies
1.5k
views
Error while using rpy2
R rpy2 Python
updated 15 months ago by ★ 2.0k • written 15 months ago by ▴ 50
0
votes
1
reply
449
views
Slingshot python error
scprep slingshot Python
updated 23 months ago by ▴ 960 • written 23 months ago by ▴ 50
0
votes
0
replies
1.0k
views
Comment: Comment: Error finding variable features in Seurat
23 months ago by sidrah.maryam ▴ 50
1
vote
2
replies
1.0k
views
Error finding variable features in Seurat
R seurat
23 months ago by sidrah.maryam ▴ 50
3
votes
5
replies
3.3k
views
Cellranger count command for single end fastq
RNA-Seq sequencing
updated 14 months ago by 43k • written 3.4 years ago by ▴ 50
0
votes
1
reply
1.6k
views
Comment: C: SRA toolkit fastq files download error
3.2 years ago by sidrah.maryam ▴ 50
0
votes
1
reply
1.6k
views
Answer: A: SRA toolkit fastq files download error
3.2 years ago by sidrah.maryam ▴ 50
1
vote
5
replies
1.6k
views
SRA toolkit fastq files download error
RNA-Seq SRA
3.2 years ago by sidrah.maryam ▴ 50
3
votes
1
reply
5.5k
views
Subsetting anndata on basis of louvain clusters
python scanpy anndata R RNA-Seq
updated 3.2 years ago by ▴ 20 • written 3.6 years ago by ▴ 50
0
votes
0
replies
3.3k
views
Comment: C: Cellranger count command for single end fastq
3.4 years ago by sidrah.maryam ▴ 50
0
votes
0
replies
1.2k
views
Comment: C: Not able to read 10x data
3.5 years ago by sidrah.maryam ▴ 50
0
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0
replies
1.2k
views
Comment: C: Not able to read 10x data
3.5 years ago by sidrah.maryam ▴ 50
3
votes
4
replies
1.2k
views
Not able to read 10x data
RNA-Seq
3.5 years ago by sidrah.maryam ▴ 50
0
votes
0
replies
3.0k
views
Comment: C: Separating each cell in fastq file
3.5 years ago by sidrah.maryam ▴ 50
3
votes
10
replies
3.0k
views
7 follow
Separating each cell in fastq file
RNA-Seq sequencing
updated 22 months ago by ▴ 20 • written 3.5 years ago by ▴ 50
0
votes
1
reply
3.0k
views
Comment: C: Separating each cell in fastq file
3.5 years ago by sidrah.maryam ▴ 50
0
votes
0
replies
897
views
Plotting non-zero values along rows in python
Python RNA-Seq
3.5 years ago by sidrah.maryam ▴ 50
0
votes
0
replies
1.8k
views
Comment: C: Error in reading expression matrix
3.6 years ago by sidrah.maryam ▴ 50
0
votes
1
reply
1.1k
views
Comment: A: Generating barplot of fpkm value
3.6 years ago by sidrah.maryam ▴ 50
0
votes
3
replies
1.1k
views
Generating barplot of fpkm value
RNA-Seq R Python fpkm
3.6 years ago by sidrah.maryam ▴ 50
1
vote
0
replies
2.0k
views
Comment: A: How to plot Raster plot
3.6 years ago by sidrah.maryam ▴ 50
6
votes
4
replies
2.0k
views
How to plot Raster plot
R python matlab neuroscience
3.6 years ago by sidrah.maryam ▴ 50
0
votes
1
reply
1.1k
views
Comment: C: Extracting rows on basis of specific column values in R
3.6 years ago by sidrah.maryam ▴ 50
2
votes
6
replies
1.1k
views
Extracting rows on basis of specific column values in R
R PYTHON DATASETS DATAFRAME
updated 3.7 years ago by ▴ 520 • written 3.7 years ago by ▴ 50
0
votes
0
replies
1.9k
views
Tornado.util.TimeoutError timed out after 20 s
python RNA-Seq programming software error
updated 3.8 years ago by 142k • written 3.8 years ago by ▴ 50
0
votes
1
reply
1.7k
views
Comment: C: MACS peak calling error
3.8 years ago by sidrah.maryam ▴ 50
0
votes
0
replies
1.4k
views
Filtering cells using scanpy
python scanpy gene RNA-Seq sequencing
3.8 years ago by sidrah.maryam ▴ 50
0
votes
1
reply
1.8k
views
Comment: C: Error in reading expression matrix
3.8 years ago by sidrah.maryam ▴ 50
1
vote
0
replies
1.8k
views
Comment: C: Error in reading expression matrix
3.8 years ago by sidrah.maryam ▴ 50
2
votes
7
replies
1.8k
views
Error in reading expression matrix
R python sequencing RNA-Seq
updated 3.8 years ago by ▴ 520 • written 3.8 years ago by ▴ 50
0
votes
1
reply
1.9k
views
Comment: C: Running linux command macs2 in R error
3.8 years ago by sidrah.maryam ▴ 50
2
votes
4
replies
1.9k
views
Running linux command macs2 in R error
R sequencing rna-seq ChIP-Seq
updated 3.8 years ago by ▴ 520 • written 3.8 years ago by ▴ 50
3
votes
7
replies
1.7k
views
MACS peak calling error
ChIP-Seq software error sequencing rna-seq
updated 3.8 years ago by • 0 • written 3.8 years ago by ▴ 50
0
votes
0
replies
1.8k
views
Comment: C: Demultiplexing fastq files
3.8 years ago by sidrah.maryam ▴ 50
0
votes
0
replies
1.8k
views
Comment: C: Demultiplexing fastq files
3.8 years ago by sidrah.maryam ▴ 50
0
votes
0
replies
1.8k
views
Comment: C: Demultiplexing fastq files
3.8 years ago by sidrah.maryam ▴ 50
0
votes
6
replies
1.8k
views
Demultiplexing fastq files
R linux python sequencing
updated 3.8 years ago by 43k • written 3.8 years ago by ▴ 50
0
votes
1
reply
852
views
Monocle3/cicero - data loading in R
atac sc ATAC R sequencing next-gen
3.8 years ago by sidrah.maryam ▴ 50
0
votes
0
replies
900
views
Comment: C: sc-ATAC pro downstream analysis in R
3.8 years ago by sidrah.maryam ▴ 50
0
votes
0
replies
6.0k
views
Comment: C: problems with macs2 installation
3.8 years ago by sidrah.maryam ▴ 50
2
votes
3
replies
900
views
sc-ATAC pro downstream analysis in R
sequencing gene ChIP-Seq R
updated 3.8 years ago by ▴ 20 • written 3.9 years ago by ▴ 50
54 results • Page 1 of 2
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