Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
0
votes
0
replies
283
views
multi-population vcf filtering for population genomics analysis
Filtering
WGS
Genomics
Population
VCF
6 months ago by
qstefano
▴ 20
0
votes
1
reply
638
views
Comment:
Comment: Excluding SNPs from repetitive regions
15 months ago by
qstefano
▴ 20
0
votes
3
replies
638
views
Excluding SNPs from repetitive regions
Population-Genomics
WGS
Variant
VCF
updated 15 months ago by
Pierre Lindenbaum
161k • written 15 months ago by
qstefano
▴ 20
0
votes
0
replies
333
views
PCA analysis of two population
WGS
SNPs
plot
PCA
Population
19 months ago by
qstefano
▴ 20
2
votes
1
reply
476
views
Relevance of alignments filtering before variant calling
Filtering
WGS
Alignment
Variant
updated 20 months ago by
Pierre Lindenbaum
161k • written 20 months ago by
qstefano
▴ 20
0
votes
1
reply
927
views
Comment:
Comment: double free or corruption (!prev): 0x00002aacc7b6b780 *** while running featurec
21 months ago by
qstefano
▴ 20
1
vote
5
replies
927
views
double free or corruption (!prev): 0x00002aacc7b6b780 *** while running featurecounts
Counting
Bash
HPC
RNA-Seq
R
updated 21 months ago by
ATpoint
81k • written 21 months ago by
qstefano
▴ 20
0
votes
0
replies
362
views
How can i exclude genetic variability inherited from parents in offspring ?
Genomics
Haplotypes
WGS
VCF
Population
21 months ago by
qstefano
▴ 20
2
votes
1
reply
391
views
Extract 'endpos' feature from bam file
Alignment
BAM
RNA-Seq
samtools
updated 10 months ago by
Ram
43k • written 23 months ago by
qstefano
▴ 20
0
votes
0
replies
400
views
Variant calling for pool-seq data
Pool-Seq
DNA-Seq
Variants
variant.calling
2.1 years ago by
qstefano
▴ 20
0
votes
0
replies
732
views
Comment:
Comment: [bwa_aln_core] calculate SA coordinate... script.sh: line 91: 183402 Killed
2.2 years ago by
qstefano
▴ 20
3
votes
3
replies
732
views
[bwa_aln_core] calculate SA coordinate... script.sh: line 91: 183402 Killed
HPC
BWA
Alignment
updated 11 months ago by
Ram
43k • written 2.2 years ago by
qstefano
▴ 20
0
votes
1
reply
599
views
Explanation of dimension differences between bam files (BWA aln and BWA mem)
R
RNA-Seq
bwa
gene
alignment
updated 2.2 years ago by
Arup Ghosh
3.2k • written 2.2 years ago by
qstefano
▴ 20
0
votes
0
replies
2.8k
views
Comment:
Comment: Installation of samtools on anaconda
2.3 years ago by
qstefano
▴ 20
1
vote
2
replies
2.8k
views
Installation of samtools on anaconda
Env
HPC
Anaconda
Bash
updated 2.3 years ago by
rpolicastro
13k • written 2.3 years ago by
qstefano
▴ 20
0
votes
0
replies
588
views
biomartr::getGenome() issue
RefSeq
R
Assembly
NCBI
Package
2.4 years ago by
qstefano
▴ 20
0
votes
0
replies
666
views
Comment:
Comment: Assign experimental groups and replicates within a GSE properly
2.5 years ago by
qstefano
▴ 20
0
votes
2
replies
666
views
Assign experimental groups and replicates within a GSE properly
R
RNASeq
GEO
Datasets
NCBI
2.5 years ago by
qstefano
▴ 20
0
votes
0
replies
591
views
Run TSS predator without TEX wig libraries
RNA-Seq
sequencing
next-gen
software error
3.1 years ago by
qstefano
▴ 20
1
vote
0
replies
1.1k
views
Comment:
C: TSS predator input files
3.1 years ago by
qstefano
▴ 20
4
votes
2
replies
1.1k
views
TSS predator input files
RNA-Seq
software error
alignment
updated 3.1 years ago by
predeus
★ 1.9k • written 3.1 years ago by
qstefano
▴ 20
1
vote
1
reply
465
views
Rockhopper tool help
RNA-Seq
R
next-gen
alignment
3.2 years ago by
qstefano
▴ 20
0
votes
0
replies
1.5k
views
Comment:
C: Conversion of GFF3 file to ptt format
3.2 years ago by
qstefano
▴ 20
0
votes
1
reply
1.5k
views
Comment:
C: Conversion of GFF3 file to ptt format
3.2 years ago by
qstefano
▴ 20
0
votes
4
replies
1.5k
views
Conversion of GFF3 file to ptt format
RNA-Seq
alignment
R
sequencing
next-gen
3.2 years ago by
qstefano
▴ 20
3
votes
2
replies
718
views
Statistic test for percentiles values
RNA-Seq
R
sequencing
updated 3.2 years ago by
Biostar
20 • written 3.3 years ago by
qstefano
▴ 20
3
votes
2
replies
725
views
Normalization of RNA seq expression values between different experiments
RNA-Seq
rna-seq
sequencing
R
gene
updated 3.4 years ago by
Qiongyi
▴ 180 • written 3.4 years ago by
qstefano
▴ 20
0
votes
0
replies
599
views
Normalization of RNA-Seq gene expression values between several GSEs
RNA-Seq
R
next-gen
sequencing
gene
3.4 years ago by
qstefano
▴ 20
0
votes
0
replies
938
views
Comment:
C: Alignment of single/paired end reads with rsubread align
3.4 years ago by
qstefano
▴ 20
3
votes
5
replies
938
views
Alignment of single/paired end reads with rsubread align
RNA-Seq
alignment
R
sequencing
genome
3.4 years ago by
qstefano
▴ 20
0
votes
1
reply
2.9k
views
Comment:
C: Reads mapped on wrong strand
3.4 years ago by
qstefano
▴ 20
0
votes
1
reply
2.9k
views
Comment:
C: Reads mapped on wrong strand
3.4 years ago by
qstefano
▴ 20
0
votes
0
replies
2.9k
views
Comment:
C: Reads mapped on wrong strand
3.4 years ago by
qstefano
▴ 20
6
votes
10
replies
2.9k
views
Reads mapped on wrong strand
RNA-Seq
R
alignment
gene
3.4 years ago by
qstefano
▴ 20
0
votes
0
replies
517
views
Normalization method for DE analysis between different experiments (GSE)
RNA-Seq
next-gen
sequencing
R
3.5 years ago by
qstefano
▴ 20
1
vote
3
replies
515
views
Distinguish sample growth condition in Biosample
RNA-Seq
rna-seq
3.6 years ago by
qstefano
▴ 20
36 results • Page
1 of 1
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6