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0
votes
0
replies
267
views
Dexseq non-stranded index error
dexseq
8 months ago by
bart
▴ 50
0
votes
0
replies
339
views
Predict interactions between lncRNAs and other RNA types (mRNAs, miRNAs)
mRNA
miRNA
lncRNA
19 months ago by
bart
▴ 50
0
votes
1
reply
760
views
Error: protect(): protection stack overflow model matrix
model.matrix
updated 20 months ago by
ATpoint
81k • written 20 months ago by
bart
▴ 50
1
vote
0
replies
4.1k
views
Comment:
Comment: Error in cut.default(a, breaks = 100) : 'x' must be numeric in pheatmap
19 months ago by
bart
▴ 50
0
votes
1
reply
4.1k
views
Comment:
Comment: Error in cut.default(a, breaks = 100) : 'x' must be numeric in pheatmap
20 months ago by
bart
▴ 50
0
votes
1
reply
4.1k
views
Comment:
Comment: Error in cut.default(a, breaks = 100) : 'x' must be numeric in pheatmap
20 months ago by
bart
▴ 50
1
vote
9
replies
4.1k
views
Error in cut.default(a, breaks = 100) : 'x' must be numeric in pheatmap
pheatmap
19 months ago by
bart
▴ 50
0
votes
0
replies
4.1k
views
Comment:
Comment: Error in cut.default(a, breaks = 100) : 'x' must be numeric in pheatmap
20 months ago by
bart
▴ 50
0
votes
2
replies
4.1k
views
Comment:
Comment: Error in cut.default(a, breaks = 100) : 'x' must be numeric in pheatmap
20 months ago by
bart
▴ 50
0
votes
0
replies
1.3k
views
Comment:
Comment: Find exon-exon spanning reads
22 months ago by
bart
▴ 50
0
votes
0
replies
1.3k
views
Comment:
Comment: Find exon-exon spanning reads
22 months ago by
bart
▴ 50
4
votes
3
replies
833
views
PCA plot interpretation after accounting for batch effects with SVA
SVA
plot
PCA
updated 23 months ago by
LauferVA
4.2k • written 23 months ago by
bart
▴ 50
0
votes
1
reply
1.9k
views
Comment:
Comment: Difference in total gene counts between samples
23 months ago by
bart
▴ 50
0
votes
1
reply
1.9k
views
Comment:
Comment: Difference in total gene counts between samples
23 months ago by
bart
▴ 50
0
votes
0
replies
1.9k
views
Comment:
Comment: Difference in total gene counts between samples
23 months ago by
bart
▴ 50
0
votes
1
reply
1.9k
views
Comment:
Comment: Difference in total gene counts between samples
23 months ago by
bart
▴ 50
0
votes
1
reply
1.9k
views
Comment:
Comment: Difference in total gene counts between samples
23 months ago by
bart
▴ 50
0
votes
2
replies
1.9k
views
Comment:
Comment: Difference in total gene counts between samples
23 months ago by
bart
▴ 50
5
votes
14
replies
1.9k
views
Difference in total gene counts between samples
rna-seq
updated 23 months ago by
swbarnes2
14k • written 23 months ago by
bart
▴ 50
1
vote
1
reply
783
views
Set fixed amount of variables to use for lasso regression
learning
lasso
machine
regression
updated 23 months ago by
Mensur Dlakic
★ 27k • written 23 months ago by
bart
▴ 50
0
votes
1
reply
2.0k
views
Comment:
Comment: Cannot differentiate between groups with heatmap
2.0 years ago by
bart
▴ 50
2
votes
3
replies
713
views
Mitochondrial gene expression
RNA-seq
mitochondria
updated 2.2 years ago by
nn
▴ 30 • written 2.2 years ago by
bart
▴ 50
0
votes
0
replies
713
views
Comment:
Comment: Mitochondrial gene expression
2.2 years ago by
bart
▴ 50
2
votes
1
reply
496
views
RNA transfer between human circulating cells and bacteria or contamination?
cells
RNA
Kraken2
updated 2.2 years ago by
Istvan Albert
100k • written 2.2 years ago by
bart
▴ 50
0
votes
0
replies
943
views
Comment:
Comment: Disease signature based on one of the following: ribosomal RNA, bacterial RNA, m
2.2 years ago by
bart
▴ 50
0
votes
3
replies
943
views
Disease signature based on one of the following: ribosomal RNA, bacterial RNA, mitochondrial RNA
bacterial
mitochondrial
RNA
ribosomal
2.2 years ago by
bart
▴ 50
7
votes
10
replies
2.0k
views
6 follow
Cannot differentiate between groups with heatmap
deseq2
heatmap
updated 24 months ago by
ATpoint
81k • written 2.3 years ago by
bart
▴ 50
0
votes
1
reply
2.0k
views
Comment:
Comment: Cannot differentiate between groups with heatmap
2.3 years ago by
bart
▴ 50
0
votes
0
replies
3.1k
views
Comment:
Comment: Heatmap deseq2
2.3 years ago by
bart
▴ 50
3
votes
2
replies
3.1k
views
Heatmap deseq2
deseq2
heatmap
2.3 years ago by
bart
▴ 50
4
votes
5
replies
1.4k
views
DESeq2: "model matrix is not full rank"
DESeq2
updated 2.3 years ago by
i.sudbery
19k • written 2.3 years ago by
bart
▴ 50
0
votes
1
reply
1.4k
views
Comment:
Comment: DESeq2: "model matrix is not full rank"
2.3 years ago by
bart
▴ 50
1
vote
1
reply
626
views
deseq2 NA values in metadata
deseq2
updated 2.3 years ago by
ATpoint
81k • written 2.3 years ago by
bart
▴ 50
0
votes
1
reply
877
views
Comment:
Comment: No differentially expressed genes
2.4 years ago by
bart
▴ 50
3
votes
3
replies
877
views
No differentially expressed genes
DESeq2
lncRNAs
updated 2.4 years ago by
basuanubhav
▴ 140 • written 2.4 years ago by
bart
▴ 50
0
votes
0
replies
715
views
Comment:
Comment: stringtie does not show results of all genes
2.4 years ago by
bart
▴ 50
0
votes
1
reply
715
views
stringtie does not show results of all genes
stringtie
galaxy
2.4 years ago by
bart
▴ 50
0
votes
0
replies
833
views
Comment:
Comment: Finding counts of lncRNAs with htseq-count /featurecounts
2.5 years ago by
bart
▴ 50
2
votes
1
reply
862
views
Differential expression analysis (DEA) of lncRNA
EdgeR
lncRNA
updated 2.5 years ago by
Gordon Smyth
★ 7.0k • written 2.5 years ago by
bart
▴ 50
0
votes
2
replies
833
views
Finding counts of lncRNAs with htseq-count /featurecounts
RNA
lncRNAs
htseq-count
non-coding
2.5 years ago by
bart
▴ 50
2
votes
1
reply
638
views
Select human protein coding transcripts in Diamond
diamond
blastx
updated 2.5 years ago by
GenoMax
141k • written 2.5 years ago by
bart
▴ 50
0
votes
1
reply
824
views
Using dgelist function in EdgeR to calculate RPKM
rpkm
edger
dgelist
updated 2.5 years ago by
Simon Ahn
▴ 10 • written 2.5 years ago by
bart
▴ 50
2
votes
1
reply
615
views
Consensus on poly-a selected lncRNAs for differential expression analysis
lncRNA
updated 2.5 years ago by
Carlo Yague
8.7k • written 2.5 years ago by
bart
▴ 50
3
votes
3
replies
840
views
Importing multiple datasets into one folder
Galaxy
updated 2.6 years ago by
cpad0112
21k • written 2.6 years ago by
bart
▴ 50
1
vote
0
replies
2.4k
views
Comment:
Comment: Bioperl SeqIO.pm cannot be found
2.7 years ago by
bart
▴ 50
1
vote
0
replies
1.2k
views
Comment:
Comment: Finding differentially expressed lncRNA
2.7 years ago by
bart
▴ 50
0
votes
2
replies
1.2k
views
Comment:
Comment: Finding differentially expressed lncRNA
2.7 years ago by
bart
▴ 50
2
votes
4
replies
1.2k
views
Finding differentially expressed lncRNA
Feelnc
lncRNA
2.7 years ago by
bart
▴ 50
0
votes
0
replies
2.4k
views
Comment:
Comment: Bioperl SeqIO.pm cannot be found
updated 2.7 years ago by
Kevin Blighe
87k • written 2.7 years ago by
bart
▴ 50
0
votes
1
reply
2.4k
views
Comment:
Comment: Bioperl SeqIO.pm cannot be found
2.7 years ago by
bart
▴ 50
57 results • Page
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