Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
questions
0
votes
0
replies
132
views
Calculate PSI values for pre-called splicing events in GFF from new fastq files
alternative
spladder
PSI
splicing
8 weeks ago by
sckinta
▴ 730
0
votes
2
replies
1.1k
views
Is there a way to subsample Hi-C at Hi-C matrix .cool file?
Hi-C
loops
updated 6 months ago by
kalavattam
▴ 190 • written 2.9 years ago by
sckinta
▴ 730
0
votes
1
reply
990
views
Bioinformatics definition of TAD boundary
hiTADs
Hi-C
TAD
updated 3.0 years ago by
kalavattam
▴ 190 • written 3.1 years ago by
sckinta
▴ 730
160
votes
19
replies
40k
views
16 follow
Why Does Rna-Seq Read Count Fit Poisson Distribution?
rna-seq
modeling
updated 2.4 years ago by
Ram
43k • written 10.5 years ago by
sckinta
▴ 730
2
votes
6
replies
2.8k
views
comparing ATAC-seq/ChIP-seq peaks
ATAC-seq
ChIP-Seq
updated 5.3 years ago by
ATpoint
82k • written 5.3 years ago by
sckinta
▴ 730
4
votes
12
replies
5.3k
views
RNA-seq replicates not clustering
RNA-Seq
clustering
updated 5.6 years ago by
Biostar
20 • written 5.7 years ago by
sckinta
▴ 730
1
vote
2
replies
2.1k
views
RNA-seq unbalanced batch effect correction
RNA-Seq
edgeR
R
Batch-Effect
updated 17 days ago by
Ram
43k • written 5.7 years ago by
sckinta
▴ 730
0
votes
1
reply
1.5k
views
Inconsistency on ensemble transcript id between ucsc and gencode
genome
assembly
5.8 years ago by
sckinta
▴ 730
0
votes
7
replies
12k
views
How to create a faster way to match a list of string to a list of patterns in r?
R
string
updated 5.9 years ago by
Michael
54k • written 5.9 years ago by
sckinta
▴ 730
6
votes
8
replies
6.9k
views
bcl2fastq report the whole sequences without trimming index and adaptor
sequencing
next-gen
updated 5.9 years ago by
drkennetz
▴ 560 • written 5.9 years ago by
sckinta
▴ 730
4
votes
1
reply
4.4k
views
Does IDR (irreproducible discovery rate) higher mean less 'reproducible' or vice versa?
IDR
ChIP-Seq
updated 5.9 years ago by
goodez
▴ 640 • written 6.3 years ago by
sckinta
▴ 730
0
votes
2
replies
1.9k
views
how to download sequences of gene product associated with certain GO term
gene-annotation
Go-term
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
sckinta
▴ 730
0
votes
1
reply
2.2k
views
what does allele frequency changes mean through multiple pairwise comparisons?
allele-frequency
updated 21 months ago by
Ram
43k • written 8.4 years ago by
sckinta
▴ 730
8
votes
6
replies
7.2k
views
How to interpret LRT < 0 in codeml branch-model based test?
Likelihood-Ratio-Test
codeml
branch-model
updated 21 months ago by
Ram
43k • written 8.5 years ago by
sckinta
▴ 730
0
votes
0
replies
2.3k
views
how to add/update node id to a tree in Bio::Tree::Tree object
perl
Bio.Tree
updated 21 months ago by
Ram
43k • written 8.5 years ago by
sckinta
▴ 730
1
vote
2
replies
4.5k
views
How to specify a branch in the tree automatically for branch-site model codeml?
codeml
tree
updated 20 months ago by
Ram
43k • written 8.5 years ago by
sckinta
▴ 730
5
votes
11
replies
7.6k
views
orthomcl error: The total number of locks exceeds the lock table size at orthomclPairs
mysql
orthomcl
updated 20 months ago by
Ram
43k • written 8.5 years ago by
sckinta
▴ 730
3
votes
4
replies
3.0k
views
Tools to detect SNP supporting read count in each bam file
alignment
SNP
updated 16 months ago by
Ram
43k • written 8.9 years ago by
sckinta
▴ 730
1
vote
4
replies
4.6k
views
Converting vcf to pileup
vcf
pilup
popoolation2
freebayes
updated 16 months ago by
Ram
43k • written 8.9 years ago by
sckinta
▴ 730
1
vote
0
replies
2.5k
views
Should I retain ORFs predicted on minus strand of transcripts which assembled from strand-specific RNA-seq ?
TransDecoder
strand-specific
RNA-Seq
updated 2.5 years ago by
Ram
43k • written 9.0 years ago by
sckinta
▴ 730
0
votes
1
reply
2.1k
views
how to remove adaptor sequence which has more than 1 indexing barcode?
RNA-Seq
sequencing
updated 22 months ago by
Ram
43k • written 9.1 years ago by
sckinta
▴ 730
18
votes
4
replies
16k
views
Fastx Invalid Quality Score Value
fastx
bash
updated 9.1 years ago by
Biostar
20 • written 10.5 years ago by
sckinta
▴ 730
5
votes
2
replies
3.4k
views
what cause high sequence duplication levels in Miseq?
RNA-Seq
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
sckinta
▴ 730
0
votes
1
reply
3.2k
views
Running trinity in DIAG grid ---- bash: error importing function definition for `module'
RNA-Seq
updated 2.3 years ago by
Ram
43k • written 9.7 years ago by
sckinta
▴ 730
0
votes
2
replies
2.7k
views
Depth of RNAseq with sensitive detection
RNA-Seq
Depth
expression
updated 2.4 years ago by
Ram
43k • written 9.7 years ago by
sckinta
▴ 730
0
votes
0
replies
1.6k
views
RAM limitation on trinity using DIAG computational resource
RAM
RNA-Seq
DIAG
updated 2.4 years ago by
Ram
43k • written 9.7 years ago by
sckinta
▴ 730
4
votes
4
replies
4.8k
views
How To Minimize The Bias Caused By Rna Amplification In Rna-Seq?
rnaseq
rna
updated 10.2 years ago by
Ryan Dale
5.0k • written 10.2 years ago by
sckinta
▴ 730
16
votes
8
replies
27k
views
Fastqc Over-Represented Sequences Are Adapters ?
fastqc
fastx
updated 10.5 years ago by
Rohit
★ 1.5k • written 10.5 years ago by
sckinta
▴ 730
28 results • Page
1 of 1
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6