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How To Annotate Methylation 450K?
methylation
updated 19 months ago by • 0 • written 11.6 years ago by ▴ 210
0
votes
9
replies
6.6k
views
how to combine methylation information from different platform?
methylation RRBS 450K
updated 5.2 years ago by • 0 • written 11.4 years ago by ▴ 210
12
votes
7
replies
6.9k
views
6 follow
how to correct gene expression based on tumor purity
gene expressin tumor purity absolut
updated 5.7 years ago by ▴ 120 • written 8.5 years ago by ▴ 210
0
votes
2
replies
2.1k
views
How To Remap Humanht V4 Chips To Hg19?
microarray illumina
updated 6.7 years ago by 20 • written 11.6 years ago by ▴ 210
1
vote
0
replies
11k
views
Comment: C: cox proportional hazard model
7.7 years ago by liu4gre ▴ 210
0
votes
1
reply
11k
views
Comment: C: cox proportional hazard model
7.7 years ago by liu4gre ▴ 210
0
votes
1
reply
11k
views
Comment: C: cox proportional hazard model
7.7 years ago by liu4gre ▴ 210
0
votes
1
reply
11k
views
Comment: C: cox proportional hazard model
7.7 years ago by liu4gre ▴ 210
19
votes
9
replies
11k
views
cox proportional hazard model
survival cox
updated 7.7 years ago by 89k • written 7.7 years ago by ▴ 210
0
votes
1
reply
2.0k
views
COSMIC paired normal cell lines for somatic mutation calling
dna-sequencing cosmic somatic mutation
updated 7.9 years ago by 20 • written 8.1 years ago by ▴ 210
0
votes
0
replies
1.2k
views
where to get TCGA infiltrating lymphocyte data?
tcga infiltrating lymphocyte
8.5 years ago by liu4gre ▴ 210
0
votes
2
replies
2.6k
views
Co-occurencing and mutually exclusive mutations
mutation
8.6 years ago by liu4gre ▴ 210
3
votes
1
reply
3.4k
views
how to get TF binding affinity from ENCODE narrowPeak or broadPeak files?
ChIP-Seq
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 210
0
votes
0
replies
5.1k
views
Comment: C: tag density v.s. binding affinity v.s. signal value
10.9 years ago by liu4gre ▴ 210
0
votes
1
reply
5.1k
views
Comment: C: tag density v.s. binding affinity v.s. signal value
10.9 years ago by liu4gre ▴ 210
2
votes
4
replies
5.1k
views
tag density v.s. binding affinity v.s. signal value
ChIP-Seq affinity tag density
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 210
0
votes
1
reply
5.4k
views
Comment: Comment: average coverage, chip-seq
updated 4.6 years ago by 45k • written 10.9 years ago by ▴ 210
0
votes
0
replies
4.3k
views
Comment: Comment: How to caclulate ChIP-Seq coverage?
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 210
0
votes
1
reply
37k
views
Comment: C: NarrowPeak format of ChiP-seq
10.9 years ago by liu4gre ▴ 210
3
votes
0
replies
3.1k
views
how to get TF binding affinity from ENCODE narrowPeak or broadPeak files?
ChIP-Seq transcription-factor narrowPeak ENCODE
updated 3.8 years ago by 45k • written 11.0 years ago by ▴ 210
0
votes
1
reply
2.5k
views
apply cufflinks to ENCODE RNA-Seq data
RNA-seq ENCODE cufflinks
updated 3.8 years ago by 45k • written 11.1 years ago by ▴ 210
3
votes
1
reply
3.4k
views
is it necessary to consider strand direction when mapping CpG sites to regions of genes?
methylation 450k RRBS genome
updated 11.3 years ago by 105k • written 11.3 years ago by ▴ 210
0
votes
1
reply
3.9k
views
Answer: A: TCGA SNP data
11.4 years ago by liu4gre ▴ 210
0
votes
3
replies
3.9k
views
TCGA SNP data
SNP TCGA
11.4 years ago by liu4gre ▴ 210
0
votes
0
replies
3.9k
views
Comment: C: TCGA SNP data
11.4 years ago by liu4gre ▴ 210
0
votes
1
reply
37k
views
Comment: C: NarrowPeak format of ChiP-seq
11.4 years ago by liu4gre ▴ 210
14
votes
8
replies
37k
views
NarrowPeak format of ChiP-seq
ChIP-Seq tag-density
updated 2.4 years ago by • 0 • written 11.4 years ago by ▴ 210
0
votes
0
replies
6.6k
views
Comment: C: how to combine methylation information from different platform?
11.4 years ago by liu4gre ▴ 210
0
votes
1
reply
6.6k
views
Comment: C: how to combine methylation information from different platform?
11.4 years ago by liu4gre ▴ 210
0
votes
1
reply
6.6k
views
Comment: C: how to combine methylation information from different platform?
11.4 years ago by liu4gre ▴ 210
1
vote
2
replies
5.8k
views
how to calculate distance between CpG site and TSS?
methylation cpg 450k TSS
updated 11.5 years ago by 6.1k • written 11.5 years ago by ▴ 210
0
votes
0
replies
1.7k
views
How To Take Care Of Broadpeak Format?
microarray
11.6 years ago by liu4gre ▴ 210
0
votes
1
reply
15k
views
Comment: C: Parsing Rna Secondary Structure Annotations?
11.6 years ago by liu4gre ▴ 210
0
votes
0
replies
2.1k
views
Comment: C: How To Remap Humanht V4 Chips To Hg19?
11.6 years ago by liu4gre ▴ 210
4
votes
3
replies
4.8k
views
Peak Length For Chip-Seq Data?
chip-seq ngs peak-calling
updated 11.8 years ago by ▴ 520 • written 11.8 years ago by ▴ 210
0
votes
0
replies
4.8k
views
Comment: C: Peak Length For Chip-Seq Data?
11.8 years ago by liu4gre ▴ 210
0
votes
2
replies
2.8k
views
Rna Structure Parsing Software
rna structure
updated 11.8 years ago by ▴ 260 • written 11.8 years ago by ▴ 210
0
votes
1
reply
15k
views
Comment: C: Parsing Rna Secondary Structure Annotations?
11.8 years ago by liu4gre ▴ 210
0
votes
1
reply
3.0k
views
Comment: C: Tf Names In Motifdb
11.8 years ago by liu4gre ▴ 210
3
votes
3
replies
3.0k
views
Tf Names In Motifdb
transcription-factor
updated 11.8 years ago by ▴ 520 • written 11.8 years ago by ▴ 210
0
votes
1
reply
3.7k
views
Comment: C: Calculate Rpm For Mirna From Bed File
11.8 years ago by liu4gre ▴ 210
0
votes
4
replies
3.7k
views
Calculate Rpm For Mirna From Bed File
mirna bed ngs
11.8 years ago by liu4gre ▴ 210
0
votes
0
replies
4.1k
views
Comment: C: How To Calculate Maf From Tcga Data?
11.8 years ago by liu4gre ▴ 210
3
votes
5
replies
4.1k
views
How To Calculate Maf From Tcga Data?
snp maf
updated 11.8 years ago by 22k • written 11.8 years ago by ▴ 210
0
votes
1
reply
4.1k
views
Comment: C: How To Calculate Maf From Tcga Data?
11.8 years ago by liu4gre ▴ 210
0
votes
1
reply
3.5k
views
Comment: C: Help With Snp Array
11.8 years ago by liu4gre ▴ 210
0
votes
4
replies
3.5k
views
Help With Snp Array
snp
updated 11.8 years ago by 8.3k • written 11.8 years ago by ▴ 210
0
votes
0
replies
3.5k
views
Comment: C: Help With Snp Array
11.8 years ago by liu4gre ▴ 210
0
votes
0
replies
1.8k
views
Mirna-Seq Data For Cd34+ Cells
11.8 years ago by liu4gre ▴ 210
0
votes
1
reply
5.7k
views
Comment: C: Question About Tcga Snp-Array Data
11.9 years ago by liu4gre ▴ 210
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