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Comment: Comment: Can I use abundance from Tximport to compare the expression level of transcript
7 days ago by aimanbarki ▴ 20
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376
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Comment: Comment: Can I use abundance from Tximport to compare the expression level of transcript
7 days ago by aimanbarki ▴ 20
0
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0
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376
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Comment: Comment: Can I use abundance from Tximport to compare the expression level of transcript
7 days ago by aimanbarki ▴ 20
0
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0
replies
376
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Comment: Comment: Can I use abundance from Tximport to compare the expression level of transcript
7 days ago by aimanbarki ▴ 20
0
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1
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376
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Comment: Comment: Can I use abundance from Tximport to compare the expression level of transcript
7 days ago by aimanbarki ▴ 20
0
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1
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376
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Comment: Comment: Can I use abundance from Tximport to compare the expression level of transcript
7 days ago by aimanbarki ▴ 20
4
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12
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376
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Can I use abundance from Tximport to compare the expression level of transcript in same condition?
Salmon Tximport
updated 7 days ago by 38k • written 8 days ago by ▴ 20
0
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1
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326
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Comment: Comment: repair.sh java.lang.AssertionError
updated 4 months ago by 127k • written 4 months ago by ▴ 20
1
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3
replies
326
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repair.sh java.lang.AssertionError
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updated 4 months ago by 127k • written 4 months ago by ▴ 20
0
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1
reply
259
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HTseq error and 0kb output file
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updated 5 months ago by 127k • written 5 months ago by ▴ 20
0
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0
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276
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Comment: Comment: What do I do with two SRR Runs per Sample
6 months ago by aimanbarki ▴ 20
1
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1
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249
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How to know runs are technical repeats
SRR repeats Technical
updated 6 months ago by 11k • written 6 months ago by ▴ 20
0
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0
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139
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Does DEXSeqHTML() give us ranked list?
DEXSeq ranked HTTML
7 months ago by aimanbarki ▴ 20
6
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3
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522
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strand specificity
specificity strand
updated 8 months ago by 70k • written 8 months ago by ▴ 20
0
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0
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744
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Comment: Comment: Easy comparison between Whippet, SplAdder and DExSeq differential splicing analy
8 months ago by aimanbarki ▴ 20
0
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0
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164
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how to know about peak expression of gene
peak expression
8 months ago by aimanbarki ▴ 20
0
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1
reply
254
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DTU by combining different type of RNA seq data
DTU analysis
updated 9 months ago by ▴ 720 • written 9 months ago by ▴ 20
0
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0
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751
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Comment: Comment: DTU vs DTE and method to these analysis
10 months ago by aimanbarki ▴ 20
0
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0
replies
751
views
Comment: Comment: DTU vs DTE and method to these analysis
10 months ago by aimanbarki ▴ 20
0
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1
reply
751
views
Comment: Comment: DTU vs DTE and method to these analysis
10 months ago by aimanbarki ▴ 20
0
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6
replies
751
views
DTU vs DTE and method to these analysis
DTU DTE RNAseq
10 months ago by aimanbarki ▴ 20
0
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0
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506
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Comment: Comment: Quantification of abundance of one gene splicing isoform
10 months ago by aimanbarki ▴ 20
0
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0
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9.3k
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Answer: Answer: How Can I Visualize Sashimi Plots In Igv Genome Browser ?
10 months ago by aimanbarki ▴ 20
0
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1
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506
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Comment: Comment: Quantification of abundance of one gene splicing isoform
10 months ago by aimanbarki ▴ 20
3
votes
4
replies
506
views
Quantification of abundance of one gene splicing isoform
splicing isoform RNAseq
10 months ago by aimanbarki ▴ 20
0
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0
replies
306
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Comment: Comment: Methods to identify genes/pathways that cause upregulation of specific gene of i
12 months ago by aimanbarki ▴ 20
1
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2
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1.2k
views
Integrating data Error: Cannot add more or fewer cell meta.data information without values being named with cell names
data Error SCTransform Integration
12 months ago by aimanbarki ▴ 20
0
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0
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1.2k
views
Answer: Answer: Integrating data Error: Cannot add more or fewer cell meta.data information with
12 months ago by aimanbarki ▴ 20
1
vote
1
reply
262
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SCTtransform Integration and PCA results object without object$seurat_clusters
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12 months ago by aimanbarki ▴ 20
1
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0
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262
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Answer: Answer: SCTtransform Integration and PCA results object without object$seurat_clusters
12 months ago by aimanbarki ▴ 20
0
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0
replies
202
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what is the best time to do batch correction
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13 months ago by aimanbarki ▴ 20
0
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0
replies
56k
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Comment: Comment: How to convert to .SRA files to .FQ (FASTQ)
13 months ago by aimanbarki ▴ 20
0
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1
reply
98k
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Comment: Comment: How to count fastq reads
13 months ago by aimanbarki ▴ 20
1
vote
1
reply
337
views
Integrate human scrna seq data to pig scrna seq data
data specie across integrate scrna
updated 13 months ago by 70k • written 13 months ago by ▴ 20
3
votes
1
reply
425
views
Cell type identification in scRNAseq
scRNAseq Celltype
updated 14 months ago by ★ 14k • written 14 months ago by ▴ 20
0
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1
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628
views
Comment: Comment: FastQC report analysis for scRNA seq data
14 months ago by aimanbarki ▴ 20
7
votes
3
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628
views
FastQC report analysis for scRNA seq data
FastQC scRNAseq
updated 14 months ago by 127k • written 14 months ago by ▴ 20
0
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1
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1.9k
views
Comment: Comment: How to analyze the scRNA seq Fastq files from NCBI
14 months ago by aimanbarki ▴ 20
6
votes
9
replies
1.9k
views
How to analyze the scRNA seq Fastq files from NCBI
SRAtool Cellranger NCBI Count
updated 14 months ago by 13k • written 14 months ago by ▴ 20
0
votes
2
replies
1.9k
views
Comment: Comment: How to analyze the scRNA seq Fastq files from NCBI
14 months ago by aimanbarki ▴ 20
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