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Comment: Comment: Can I use abundance from Tximport to compare the expression level of transcript
13 months ago by aimanbarki ▴ 20
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Comment: Comment: Can I use abundance from Tximport to compare the expression level of transcript
13 months ago by aimanbarki ▴ 20
0
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0
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1.3k
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Comment: Comment: Can I use abundance from Tximport to compare the expression level of transcript
13 months ago by aimanbarki ▴ 20
0
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0
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1.3k
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Comment: Comment: Can I use abundance from Tximport to compare the expression level of transcript
13 months ago by aimanbarki ▴ 20
0
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1.3k
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Comment: Comment: Can I use abundance from Tximport to compare the expression level of transcript
13 months ago by aimanbarki ▴ 20
0
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1.3k
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Comment: Comment: Can I use abundance from Tximport to compare the expression level of transcript
13 months ago by aimanbarki ▴ 20
4
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12
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1.3k
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Can I use abundance from Tximport to compare the expression level of transcript in same condition?
Salmon Tximport
updated 13 months ago by 43k • written 13 months ago by ▴ 20
0
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1
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726
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Comment: Comment: repair.sh java.lang.AssertionError
updated 17 months ago by 141k • written 17 months ago by ▴ 20
1
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3
replies
726
views
repair.sh java.lang.AssertionError
repair.sh bbtools
updated 11 months ago by 43k • written 17 months ago by ▴ 20
0
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1
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489
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HTseq error and 0kb output file
htseq emptyfile warnings
updated 18 months ago by 141k • written 18 months ago by ▴ 20
0
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0
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555
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Comment: Comment: What do I do with two SRR Runs per Sample
19 months ago by aimanbarki ▴ 20
1
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1
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465
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How to know runs are technical repeats
SRR repeats Technical
updated 19 months ago by 11k • written 19 months ago by ▴ 20
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0
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281
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Does DEXSeqHTML() give us ranked list?
DEXSeq ranked HTTML
20 months ago by aimanbarki ▴ 20
6
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3
replies
1.1k
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strand specificity
specificity strand
updated 21 months ago by 82k • written 21 months ago by ▴ 20
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0
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1.1k
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Comment: Comment: Easy comparison between Whippet, SplAdder and DExSeq differential splicing analy
21 months ago by aimanbarki ▴ 20
0
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0
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287
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how to know about peak expression of gene
peak expression
21 months ago by aimanbarki ▴ 20
0
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1
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444
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DTU by combining different type of RNA seq data
DTU analysis
updated 22 months ago by ★ 1.7k • written 22 months ago by ▴ 20
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0
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1.5k
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Comment: Comment: DTU vs DTE and method to these analysis
23 months ago by aimanbarki ▴ 20
0
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0
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1.5k
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Comment: Comment: DTU vs DTE and method to these analysis
23 months ago by aimanbarki ▴ 20
0
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1
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1.5k
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Comment: Comment: DTU vs DTE and method to these analysis
23 months ago by aimanbarki ▴ 20
0
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6
replies
1.5k
views
DTU vs DTE and method to these analysis
DTU DTE RNAseq
23 months ago by aimanbarki ▴ 20
0
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0
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876
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Comment: Comment: Quantification of abundance of one gene splicing isoform
23 months ago by aimanbarki ▴ 20
0
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0
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11k
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Answer: Answer: How Can I Visualize Sashimi Plots In Igv Genome Browser ?
23 months ago by aimanbarki ▴ 20
0
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1
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876
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Comment: Comment: Quantification of abundance of one gene splicing isoform
23 months ago by aimanbarki ▴ 20
3
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4
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876
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Quantification of abundance of one gene splicing isoform
splicing isoform RNAseq
23 months ago by aimanbarki ▴ 20
0
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0
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484
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Comment: Comment: Methods to identify genes/pathways that cause upregulation of specific gene of i
2.1 years ago by aimanbarki ▴ 20
1
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2
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2.2k
views
Integrating data Error: Cannot add more or fewer cell meta.data information without values being named with cell names
Integration SCTransform
updated 11 months ago by 43k • written 2.1 years ago by ▴ 20
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0
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2.2k
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Answer: Answer: Integrating data Error: Cannot add more or fewer cell meta.data information with
2.1 years ago by aimanbarki ▴ 20
1
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1
reply
468
views
SCTtransform Integration and PCA results object without object$seurat_clusters
SCTransform Integration PCA
2.1 years ago by aimanbarki ▴ 20
1
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0
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468
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Answer: Answer: SCTtransform Integration and PCA results object without object$seurat_clusters
2.1 years ago by aimanbarki ▴ 20
0
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0
replies
339
views
what is the best time to do batch correction
harmony batch correction
2.2 years ago by aimanbarki ▴ 20
0
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0
replies
62k
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Comment: Comment: How to convert to .SRA files to .FQ (FASTQ)
2.2 years ago by aimanbarki ▴ 20
0
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1
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120k
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Comment: Comment: How to count fastq reads
2.2 years ago by aimanbarki ▴ 20
1
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1
reply
510
views
Integrate human scrna seq data to pig scrna seq data
data specie across integrate scrna
updated 2.2 years ago by 82k • written 2.2 years ago by ▴ 20
3
votes
1
reply
663
views
Cell type identification in scRNAseq
scRNAseq Celltype
updated 2.2 years ago by ★ 16k • written 2.2 years ago by ▴ 20
0
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1
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1.0k
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Comment: Comment: FastQC report analysis for scRNA seq data
2.3 years ago by aimanbarki ▴ 20
7
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3
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1.0k
views
FastQC report analysis for scRNA seq data
FastQC scRNAseq
updated 2.3 years ago by 141k • written 2.3 years ago by ▴ 20
0
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1
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2.9k
views
Comment: Comment: How to analyze the scRNA seq Fastq files from NCBI
2.3 years ago by aimanbarki ▴ 20
6
votes
9
replies
2.9k
views
How to analyze the scRNA seq Fastq files from NCBI
SRAtool Cellranger NCBI
updated 10 months ago by 43k • written 2.3 years ago by ▴ 20
0
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2
replies
2.9k
views
Comment: Comment: How to analyze the scRNA seq Fastq files from NCBI
2.3 years ago by aimanbarki ▴ 20
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