Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
1
vote
1
reply
225
views
Comment:
Comment: PCR duplicate removal in single-end atac-seq data
2 days ago by
sarahmanderni
▴ 110
4
votes
3
replies
225
views
PCR duplicate removal in single-end atac-seq data
ATAC-seq
pcr-duplicate
updated 2 days ago by
ATpoint
83k • written 2 days ago by
sarahmanderni
▴ 110
1
vote
1
reply
256
views
Batch effect issue in RNA velocity analysis
RNA-velocity
integration
updated 10 weeks ago by
ATpoint
83k • written 10 weeks ago by
sarahmanderni
▴ 110
0
votes
0
replies
318
views
Comment:
Comment: High number of detected genes per cell after doublet removal - scRNAseq data
11 weeks ago by
sarahmanderni
▴ 110
0
votes
0
replies
318
views
Comment:
Comment: High number of detected genes per cell after doublet removal - scRNAseq data
11 weeks ago by
sarahmanderni
▴ 110
0
votes
3
replies
318
views
High number of detected genes per cell after doublet removal - scRNAseq data
scRNAseq
duoblet
11 weeks ago by
sarahmanderni
▴ 110
0
votes
0
replies
655
views
Comment:
Comment: Single cluster spanning in different locations in UMAP in scRNAseq data
12 weeks ago by
sarahmanderni
▴ 110
4
votes
3
replies
655
views
Single cluster spanning in different locations in UMAP in scRNAseq data
UMAP
scRNAseq
12 weeks ago by
sarahmanderni
▴ 110
0
votes
1
reply
469
views
Comment:
Comment: scRNAseq normalization
12 weeks ago by
sarahmanderni
▴ 110
1
vote
1
reply
258
views
Seurat 5 integration
integration
seurat
updated 12 weeks ago by
jared.andrews07
★ 17k • written 12 weeks ago by
sarahmanderni
▴ 110
4
votes
5
replies
469
views
scRNAseq normalization
scRNA-seq
SCT
updated 12 weeks ago by
ATpoint
83k • written 12 weeks ago by
sarahmanderni
▴ 110
3
votes
3
replies
393
views
quality control scRNAseq
scRNAseq
qc
updated 3 months ago by
jv
★ 1.8k • written 3 months ago by
sarahmanderni
▴ 110
1
vote
1
reply
375
views
T2T chm13 fasta and annotation files
NGS
T2T-chm13
reference-genome
updated 3 months ago by
Darked89
4.6k • written 3 months ago by
sarahmanderni
▴ 110
0
votes
0
replies
335
views
Atac-seq shift single-end data
single-end
atac-seq
updated 6 months ago by
Ram
44k • written 6 months ago by
sarahmanderni
▴ 110
0
votes
0
replies
1.1k
views
Comment:
Comment: scRNA-seq quality control
7 months ago by
sarahmanderni
▴ 110
0
votes
0
replies
1.1k
views
Comment:
Comment: scRNA-seq quality control
7 months ago by
sarahmanderni
▴ 110
1
vote
4
replies
1.1k
views
scRNA-seq quality control
qc
scrnaseq
updated 7 months ago by
jv
★ 1.8k • written 7 months ago by
sarahmanderni
▴ 110
1
vote
0
replies
334
views
Input data matrix from Seurat toolkit analysis for RNA velocity analysis using scvelo
seurat
velocity
scvelo
scrnaseq
7 months ago by
sarahmanderni
▴ 110
0
votes
1
reply
595
views
Comment:
Comment: Visualisation of accessible regions in single cell atacseq data
9 months ago by
sarahmanderni
▴ 110
5
votes
3
replies
595
views
Visualisation of accessible regions in single cell atacseq data
visualization
scATAC-seq
single-cell
updated 9 months ago by
Ram
44k • written 9 months ago by
sarahmanderni
▴ 110
1
vote
2
replies
1.2k
views
Jupyter notebook installation
Jupyter
updated 11 weeks ago by
chictu
▴ 10 • written 10 months ago by
sarahmanderni
▴ 110
0
votes
0
replies
1.3k
views
Comment:
Comment: New mouse reference genome (GRCm39/mm39)
updated 10 months ago by
Ram
44k • written 10 months ago by
sarahmanderni
▴ 110
0
votes
3
replies
1.3k
views
New mouse reference genome (GRCm39/mm39)
reference-genome
mm39
updated 10 months ago by
Ram
44k • written 10 months ago by
sarahmanderni
▴ 110
0
votes
1
reply
814
views
Comment:
Comment: bamCoverage fails in bam files with large number of small contigs in headers
10 months ago by
sarahmanderni
▴ 110
0
votes
1
reply
814
views
Comment:
Comment: bamCoverage fails in bam files with large number of small contigs in headers
10 months ago by
sarahmanderni
▴ 110
0
votes
5
replies
814
views
bamCoverage fails in bam files with large number of small contigs in headers
bamCoverage
updated 10 months ago by
colindaven
6.4k • written 10 months ago by
sarahmanderni
▴ 110
0
votes
1
reply
2.0k
views
Comment:
Comment: RNA-seq de novo assembly alignment quality assessment
3.1 years ago by
sarahmanderni
▴ 110
0
votes
1
reply
2.0k
views
Comment:
Comment: RNA-seq de novo assembly alignment quality assessment
3.1 years ago by
sarahmanderni
▴ 110
0
votes
1
reply
2.0k
views
Comment:
Comment: RNA-seq de novo assembly alignment quality assessment
3.1 years ago by
sarahmanderni
▴ 110
9
votes
9
replies
2.0k
views
RNA-seq de novo assembly alignment quality assessment
trinity
rnaseq
denovo
assembly
3.1 years ago by
sarahmanderni
▴ 110
0
votes
1
reply
2.9k
views
Microarray batch effect correction
Microarray
Batch-effect
updated 8 weeks ago by
Ram
44k • written 6.8 years ago by
sarahmanderni
▴ 110
0
votes
1
reply
27k
views
Comment:
C: TMM normalization factors in RNA-seq analysis
6.8 years ago by
sarahmanderni
▴ 110
0
votes
0
replies
27k
views
Comment:
C: TMM normalization factors in RNA-seq analysis
6.8 years ago by
sarahmanderni
▴ 110
0
votes
0
replies
27k
views
Comment:
C: TMM normalization factors in RNA-seq analysis
6.8 years ago by
sarahmanderni
▴ 110
11
votes
8
replies
27k
views
TMM normalization factors in RNA-seq analysis
RNA-Seq
TMM normalization
updated 6.8 years ago by
h.mon
35k • written 6.8 years ago by
sarahmanderni
▴ 110
14
votes
11
replies
12k
views
6 follow
Paired-End Bam Files
paired-end
bam
updated 8.4 years ago by
Shicheng Guo
★ 9.5k • written 10.4 years ago by
sarahmanderni
▴ 110
0
votes
1
reply
1.7k
views
Comment:
C: mRNA expression levels association
8.5 years ago by
sarahmanderni
▴ 110
3
votes
4
replies
1.7k
views
mRNA expression levels association
RNA-Seq
updated 8.5 years ago by
TriS
★ 4.7k • written 8.5 years ago by
sarahmanderni
▴ 110
6
votes
3
replies
2.0k
views
Borrow Information Between Genes In Rna-Seq Analysis Methods
rna-seq
updated 8.7 years ago by
Biostar
20 • written 10.3 years ago by
sarahmanderni
▴ 110
0
votes
1
reply
3.9k
views
Comment:
C: TopHat with older versions of Bowtie
10.0 years ago by
sarahmanderni
▴ 110
3
votes
3
replies
3.9k
views
TopHat with older versions of Bowtie
bowtie
Tophat
updated 2.6 years ago by
Ram
44k • written 10.0 years ago by
sarahmanderni
▴ 110
7
votes
1
reply
8.9k
views
Reference genome for mapping RNA-seq spike-in dataset
RNA-Seq
alignment
updated 2.6 years ago by
Ram
44k • written 10.0 years ago by
sarahmanderni
▴ 110
1
vote
1
reply
2.2k
views
Sample clustering based on gene expression
cluster
gene expression
updated 10.1 years ago by
Irsan
★ 7.8k • written 10.1 years ago by
sarahmanderni
▴ 110
1
vote
4
replies
1.9k
views
Retrieving Information From Ensembl Without Knowing The Speices
ensembl
updated 10.2 years ago by
Emily
23k • written 10.2 years ago by
sarahmanderni
▴ 110
0
votes
1
reply
3.3k
views
Comment:
C: Gene-Specific Normalization In Rna-Seq
10.2 years ago by
sarahmanderni
▴ 110
0
votes
1
reply
3.3k
views
Comment:
C: Gene-Specific Normalization In Rna-Seq
10.2 years ago by
sarahmanderni
▴ 110
7
votes
5
replies
3.3k
views
Gene-Specific Normalization In Rna-Seq
normalization
rna-seq
updated 10.2 years ago by
Devon Ryan
104k • written 10.2 years ago by
sarahmanderni
▴ 110
0
votes
1
reply
2.0k
views
Comment:
C: Borrow Information Between Genes In Rna-Seq Analysis Methods
10.2 years ago by
sarahmanderni
▴ 110
0
votes
1
reply
3.4k
views
Comment:
C: Detection Of Alignment Algorithm Based On Bam Files
10.3 years ago by
sarahmanderni
▴ 110
5
votes
3
replies
3.4k
views
Detection Of Alignment Algorithm Based On Bam Files
alignment
bam
updated 10.3 years ago by
lomereiter
▴ 500 • written 10.3 years ago by
sarahmanderni
▴ 110
57 results • Page
1 of 2
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6