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3
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Answer: A: stanford microaray database
10.4 years ago by Na Sed ▴ 310
0
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0
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5.9k
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Comment: Comment: Comparing 2 pathway over-representation analyses
updated 2.9 years ago by 45k • written 10.4 years ago by ▴ 310
6
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1
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2.9k
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Two different methods for calculating p-value?!
p-value pathway
updated 2.9 years ago by 45k • written 10.4 years ago by ▴ 310
2
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0
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7.6k
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Answer: Answer: How can I annotate GRanges object in R with refSeqID, gene symbol, description a
updated 2.9 years ago by 45k • written 10.4 years ago by ▴ 310
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2.1k
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Comment: C: Oncomir database needed!
10.4 years ago by Na Sed ▴ 310
0
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1
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2.1k
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Comment: Comment: Oncomir database needed!
updated 2.8 years ago by 45k • written 10.4 years ago by ▴ 310
0
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4
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2.1k
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Oncomir database needed!
oncomir miRNA
updated 2.8 years ago by 45k • written 10.4 years ago by ▴ 310
0
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0
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2.1k
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Answer: Answer: List of involved genes in a specific disease
updated 2.8 years ago by 45k • written 10.4 years ago by ▴ 310
1
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2
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2.1k
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List of involved genes in a specific disease
disease gene-names
updated 2.8 years ago by 45k • written 10.4 years ago by ▴ 310
1
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0
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3.6k
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Comment: C: Retrieve list of human Kegg pathway identifiers for Environmental Information Pr
10.4 years ago by Na Sed ▴ 310
1
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2
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3.6k
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Comment: Comment: Retrieve list of human Kegg pathway identifiers for Environmental Information Pr
updated 4.0 years ago by 45k • written 10.4 years ago by ▴ 310
1
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1
reply
3.7k
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Answer: A: How to use TCGA miRNA seq data?
10.4 years ago by Na Sed ▴ 310
1
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1
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3.4k
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Answer: C: Gene Expression Data of Disease vs. Control
10.4 years ago by Na Sed ▴ 310
0
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1
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2.2k
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Comment: C: Microarray data analysis
10.5 years ago by Na Sed ▴ 310
0
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5.0k
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Comment: C: Mapping genome regions to gene symbols in two ways get weird results
10.5 years ago by Na Sed ▴ 310
0
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1
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5.0k
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Comment: C: Mapping genome regions to gene symbols in two ways get weird results
10.5 years ago by Na Sed ▴ 310
0
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1
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5.0k
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Comment: C: Mapping genome regions to gene symbols in two ways get weird results
10.5 years ago by Na Sed ▴ 310
4
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6
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5.0k
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Mapping genome regions to gene symbols in two ways get weird results
BiomaRt genome-region Homo.sapiens R
updated 2.8 years ago by 45k • written 10.5 years ago by ▴ 310
0
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0
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4.4k
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Comment: Comment: CNV data from TCGA
updated 2.8 years ago by 45k • written 10.5 years ago by ▴ 310
4
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2
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4.4k
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CNV data from TCGA
CNV TCGA
updated 2.8 years ago by 45k • written 10.5 years ago by ▴ 310
0
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0
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7.2k
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Comment: C: Obtain The Gene Level Cnv Matrix From Tcga Level3 Cnv Data
10.5 years ago by Na Sed ▴ 310
0
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0
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2.8k
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Steps to process CNV level 3 files from TCGA database
TCGA CNV
updated 3.3 years ago by 45k • written 10.5 years ago by ▴ 310
14
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2
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5.9k
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Mapping genome region to gene symbols in CNV files from TCGA
R CNV Gene symbols genome region
updated 3.3 years ago by 45k • written 10.5 years ago by ▴ 310
0
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0
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3.8k
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Answer: Answer: Who qualifies to be a bioinformatician?
updated 3.3 years ago by 45k • written 10.5 years ago by ▴ 310
0
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0
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11k
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Comment: C: How To Get The Kegg Pathway Name After Enrichment Analysis Using Kegg.Db From Bi
10.6 years ago by Na Sed ▴ 310
2
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1
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2.0k
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Grouping\Clustering miRNAs in non-overlapped groups
microRNA clustering
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 310
0
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0
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3.0k
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Comment: C: Gene Network construction
10.6 years ago by Na Sed ▴ 310
1
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1
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3.0k
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Answer: A: Gene Network construction
10.6 years ago by Na Sed ▴ 310
2
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1
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3.6k
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Installing BioGrid Plug-in 2.0 for Cytoscape 3.2.1
BioGrid Cytoscape JAR files
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 310
0
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0
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1.8k
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Comment: C: What is the best method for selecting significant genes in one class expression
10.6 years ago by Na Sed ▴ 310
0
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0
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8.6k
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Comment: Comment: Batch ID in TCGA database
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 310
0
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2
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1.8k
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What is the best method for selecting significant genes in one class expression profiles?
significance analysis gene expression
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 310
0
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0
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11k
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Answer: C: How To Retrieve Tcga Mirna-Mrna Data
10.6 years ago by Na Sed ▴ 310
1
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0
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8.6k
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Comment: C: Batch ID in TCGA database
10.6 years ago by Na Sed ▴ 310
9
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6
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8.6k
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Batch ID in TCGA database
Batch-effect TCGA R
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 310
1
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0
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4.0k
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Answer: A: Selecting group of genes using sparse group lasso and CVX package in MATLAB
10.6 years ago by Na Sed ▴ 310
1
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1
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4.0k
views
Selecting group of genes using sparse group lasso and CVX package in MATLAB
MATLAB CVX sparse group lasso
10.6 years ago by Na Sed ▴ 310
0
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1
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5.9k
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Comment: Comment: Is there anyway to get BioGrid gene interaction network automatically using R?
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 310
8
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4
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5.9k
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Is there anyway to get BioGrid gene interaction network automatically using R?
BioGrid gene interaction network R
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 310
2
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0
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5.3k
views
Answer: A: Design matrix and contrast
10.7 years ago by Na Sed ▴ 310
2
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1
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5.3k
views
Design matrix and contrast
Gene-set-analysis Limma ROAST
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 310
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