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126 results • Page
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Herald:
The Biostar Herald for Monday, May 13, 2024
herald
3 days ago by
Biostar
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The Biostar Herald for Monday, May 06, 2024
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10 days ago by
Biostar
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The Biostar Herald for Monday, April 29, 2024
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17 days ago by
Biostar
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Herald:
The Biostar Herald for Tuesday, April 23, 2024
herald
updated 23 days ago by
Pierre Lindenbaum
161k • written 23 days ago by
Biostar
2.8k
6
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225
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Herald:
The Biostar Herald for Monday, April 15, 2024
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4 weeks ago by
Biostar
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194
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The Biostar Herald for Tuesday, April 09, 2024
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5 weeks ago by
Biostar
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211
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The Biostar Herald for Wednesday, April 03, 2024
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6 weeks ago by
Biostar
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233
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The Biostar Herald for Monday, March 25, 2024
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7 weeks ago by
Biostar
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236
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The Biostar Herald for Monday, March 11, 2024
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9 weeks ago by
Biostar
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318
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The Biostar Herald for Monday, February 26, 2024
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11 weeks ago by
Biostar
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248
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The Biostar Herald for Tuesday, February 20, 2024
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Biostar
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The Biostar Herald for Monday, February 12, 2024
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Biostar
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The Biostar Herald for Wednesday, January 31, 2024
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Biostar
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316
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The Biostar Herald for Monday, January 22, 2024
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Biostar
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The Biostar Herald for Monday, January 15, 2024
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Biostar
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The Biostar Herald for Monday, January 08, 2024
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4 months ago by
Biostar
2.8k
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471
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Herald:
The Biostar Herald for Tuesday, December 19, 2023
herald
updated 4 months ago by
cmdcolin
★ 3.8k • written 4 months ago by
Biostar
2.8k
4
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382
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Herald:
The Biostar Herald for Monday, December 11, 2023
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5 months ago by
Biostar
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385
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The Biostar Herald for Monday, December 04, 2023
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Biostar
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388
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Herald:
The Biostar Herald for Monday, November 27, 2023
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Biostar
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428
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The Biostar Herald for Monday, November 20, 2023
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Biostar
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415
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The Biostar Herald for Monday, November 13, 2023
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Biostar
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442
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The Biostar Herald for Monday, November 06, 2023
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Biostar
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460
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The Biostar Herald for Monday, October 30, 2023
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6 months ago by
Biostar
2.8k
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500
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Herald:
The Biostar Herald for Monday, October 23, 2023
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6 months ago by
Biostar
2.8k
3
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463
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Herald:
The Biostar Herald for Monday, October 16, 2023
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7 months ago by
Biostar
2.8k
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574
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Herald:
The Biostar Herald for Monday, October 09, 2023
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written 7 months ago by
Biostar
2.8k
3
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519
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Herald:
The Biostar Herald for Tuesday, September 26, 2023
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7 months ago by
Biostar
2.8k
4
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562
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The Biostar Herald for Wednesday, September 20, 2023
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7 months ago by
Biostar
2.8k
4
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510
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The Biostar Herald for Wednesday, September 06, 2023
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8 months ago by
Biostar
2.8k
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764
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Herald:
The Biostar Herald for Monday, August 28, 2023
herald
updated 8 months ago by
Jesse
▴ 770 • written 8 months ago by
Biostar
2.8k
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620
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Herald:
The Biostar Herald for Thursday, August 24, 2023
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8 months ago by
Biostar
2.8k
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698
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Herald:
The Biostar Herald for Wednesday, August 09, 2023
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9 months ago by
Biostar
2.8k
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808
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Herald:
The Biostar Herald for Wednesday, August 02, 2023
herald
9 months ago by
Biostar
2.8k
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1.1k
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Herald:
The Biostar Herald for Thursday, June 15, 2023
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11 months ago by
Biostar
2.8k
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779
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Herald:
The Biostar Herald for Monday, June 05, 2023
herald
11 months ago by
Biostar
2.8k
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846
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Herald:
The Biostar Herald for Tuesday, May 23, 2023
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11 months ago by
Biostar
2.8k
3
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841
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Herald:
The Biostar Herald for Thursday, May 11, 2023
herald
12 months ago by
Biostar
2.8k
5
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1
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840
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Herald:
The Biostar Herald for Monday, May 01, 2023
herald
updated 12 months ago by
cmdcolin
★ 3.8k • written 12 months ago by
Biostar
2.8k
2
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733
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Herald:
The Biostar Herald for Monday, April 24, 2023
herald
12 months ago by
Biostar
2.8k
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718
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Herald:
The Biostar Herald for Monday, April 17, 2023
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13 months ago by
Biostar
2.8k
3
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754
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Herald:
The Biostar Herald for Monday, April 10, 2023
herald
13 months ago by
Biostar
2.8k
5
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659
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Herald:
The Biostar Herald for Monday, April 03, 2023
herald
13 months ago by
Biostar
2.8k
2
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646
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Herald:
The Biostar Herald for Tuesday, March 28, 2023
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13 months ago by
Biostar
2.8k
2
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710
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Herald:
The Biostar Herald for Monday, March 13, 2023
herald
14 months ago by
Biostar
2.8k
2
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0
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672
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Herald:
The Biostar Herald for Tuesday, February 28, 2023
herald
14 months ago by
Biostar
2.8k
2
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699
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Herald:
The Biostar Herald for Monday, February 20, 2023
herald
15 months ago by
Biostar
2.8k
1
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727
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Herald:
The Biostar Herald for Wednesday, February 15, 2023
herald
15 months ago by
Biostar
2.8k
2
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708
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Herald:
The Biostar Herald for Monday, February 06, 2023
herald
15 months ago by
Biostar
2.8k
3
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633
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Herald:
The Biostar Herald for Monday, January 30, 2023
herald
15 months ago by
Biostar
2.8k
126 results • Page
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Recent Votes
Comment: Converting Degree Minutes (DM) to Decimal Degrees (DD) using python script
Answer: Details on salmon index
ATAC-seq sample normalization
Answer: Faster Needleman-Wunsch rapid global alignment of two sequences?
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences?
Comment: Can I perform a correlation test with 3 biological replicates per condition?
Answer: --normalizeUsing RPGC
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Recent Replies
Comment: GRIDSS: the Genomic Rearrangement IDentification Software Suite
by
dario.garvan
▴ 520
It seems that Alexandrov's [structural variant and copy number signatures][1] estimated by the [SigProfiler software ecosystem][2] aren't c…
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences?
by
GenoMax
142k
Then you may want to see if a program like `lastz` ([**LINK**][1]) may be useful. [1]: https://github.com/lastz/lastz
Comment: Collect dispersed executable files and run them by using bingo.
by
Ram
43k
What is the purpose of this tool? I have `~/bin` in my $PATH and I soft-link all executables I need to that location so why install a new t…
Comment: Merge clusters in Seurat UMAP
by
bk11
★ 2.4k
Can you try this? library(dplyr) seuratobj@meta.data <- seuratobj@meta.data %>% mutate(seurat_clusters = recode(seurat_clu…
Comment: Merge clusters in Seurat UMAP
by
kilcdincer
▴ 10
Thank you for the response but it does not change anything.
Comment: Merge clusters in Seurat UMAP
by
bk11
★ 2.4k
I have not tested but you could try something like below- seuratobj$seurat_clusters[seuratobj$seurat_clusters==5]=0 seuratobj$seur…
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences?
by
Gabriel R.
★ 2.9k
I know about it, isn't there a simple C++ static binary?
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences?
by
Gabriel R.
★ 2.9k
needle is great! but it does not handle sequences of 100k or so.
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
Ram
43k
Please use the formatting bar (especially the `code` option) to present your post better. You can use backticks for inline code (\`text\` b…
Comment: Single-cell ambient RNA correction: SoupX vs decontX contamination fraction
by
txema.heredia
▴ 130
The point is that you need to feed the ambient algorithm a clustering list as input. This way, it checks for genes present in the soup vs g…
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
by
swbarnes2
14k
Wait, so the magnitudes of the PCs are in the thousands? That's not normal for RNASeq.
Comment: Help with VG Toolkit: VCF Output is Empty
by
Jordan M Eizenga
▴ 460
What do you get if you use `vg stats -a` on the GAM file?
Comment: About runing Pilon on individual chromosomes when polish draft genome assembly
by
sansan_96
▴ 90
Hello, What approach could you recommend for a large genome (3Gb) with about 10k scaffolds? I'm having problems with RAM when processing t…
Comment: Single-cell ambient RNA correction: SoupX vs decontX contamination fraction
by
e.r.zakiev
▴ 210
Very good question and analysis. I personally only tried SoupX so can't weigh in on the comparison. This might be not really the issue here…
Comment: Is there any way to modify this pie chart ?
by
marco.barr
▴ 120
Try following the same logic as the guide which adds the labels about halfway through each pie slice value. Check column's name in script b…
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