Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Limit : all time
all time
today
this week
this month
this year
1,000 results • Page
5 of 20
Sort: Rank
Rank
Views
Votes
Replies
0
votes
0
replies
417
views
News:
ISMB-affiliated virtual tutorial on Neo4j/Cypher for life sciences
neo4j
cypher
graph
knowledge
13 months ago by
Stephen
• 0
0
votes
0
replies
485
views
News:
Announcing workshop on Declarative Programming in Biology and Medicine (Seattle, Sept. 2023)
medicine
declmed
declarative
icfp
precision
12 months ago by
Stephen
• 0
0
votes
0
replies
423
views
News:
Course live online Introduction to Bayesian Analyses using R, May 8th-12th, 2023
bayesian
RProject
course
online
13 months ago by
Sole
• 0
0
votes
2
replies
889
views
News:
Course - Metagenomics, metatranscriptomics, and multi'omics for microbial community Studies
Metagenomics
Metatranscriptomics
Multiomics
updated 13 months ago by
Ram
43k • written 13 months ago by
carlopecoraro2
★ 2.5k
10
votes
4
replies
1.3k
views
News:
RNA-Seq Data Analysis Workshop - Join us in Berlin, Germany from March 27-30, 2023!
NGS
transcriptomics
workshop
updated 13 months ago by
kng
▴ 30 • written 14 months ago by
David Langenberger
11k
1
vote
0
replies
943
views
News:
Summer School in Bioinformatics
Genomics
Docker
RNA-seq
updated 13 months ago by
Ram
43k • written 13 months ago by
carlopecoraro2
★ 2.5k
1
vote
1
reply
674
views
News:
Sign-ups for the St. Jude KIDS23 BioHackathon (May 3-5th) open through March 15th!
stjude
hackathon
13 months ago by
jared.andrews07
★ 16k
1
vote
0
replies
438
views
News:
Course - BIOINFORMATIC ANALYSIS OF TRANSPOSABLE ELEMENTS
Transposable-Elements
TE
Genome-Assembly
updated 13 months ago by
Ram
43k • written 13 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
444
views
News:
Environmental Metagenomics course
Environmental-Metagenomics
updated 13 months ago by
Ram
43k • written 13 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
423
views
News:
Course - GENERALIZED LINEAR MODELS in R
GLM
R
Generalised-Linear-Model
updated 11 months ago by
Ram
43k • written 13 months ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
490
views
News:
Virtual Single Cell RNA-seq Workshop
single
genomics
cell
expression
rna-seq
workshop
gene
14 months ago by
mia.nahom
▴ 10
1
vote
0
replies
449
views
News:
Advanced Bayesian statistics in R course
Statistics
RegressionModeling
Bayesian
R
14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
380
views
News:
Course - INTRODUCTION TO THE ANALYSIS OF LONGITUDINAL DATA WITH R
Genomics
LongitudinalData
R
14 months ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
909
views
News:
The GDC Legacy Archive is retiring soon.
genomic-data-commons
tcga
gdc
updated 14 months ago by
Ram
43k • written 14 months ago by
Zhenyu Zhang
★ 1.2k
0
votes
0
replies
448
views
News:
course MULTIVARIATE DATA ANALYSIS WITH R AND VEGAN
Vegan
MULTIVARIATEDATAANALYSIS
Statistics
R
14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
386
views
News:
course - single-cell RNAseq with R/Bioconductor
Bioconductor
single-cell
genomics
RNAseq
updated 13 months ago by
Ram
43k • written 14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
573
views
News:
Course - Analysis of PROKARYOTIC PANGENOMES
Genomics
Pangenomes
updated 14 months ago by
Ram
43k • written 14 months ago by
carlopecoraro2
★ 2.5k
5
votes
3
replies
910
views
News:
March 13-16: Virtual Nextflow and nf-core training event in 5 languages
nf-core
pipeline
Nextflow
updated 13 months ago by
Maxime Garcia
▴ 340 • written 14 months ago by
Matthias Zepper
4.5k
0
votes
1
reply
423
views
News:
Courses in March. -still a few seats available
Bioconductor
Genomics
R
updated 14 months ago by
Ram
43k • written 14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
393
views
News:
course - Next steps in applied Bayesian regression modeling
Statistics
RegressionModeling
Bayesian
R
14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
476
views
News:
Introduction to GWAS course in June
GWAS
R
updated 13 months ago by
Ram
43k • written 14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
740
views
News:
Introduction to GWAS course (6th edition) - June, 5th-8th
GWAS
R
updated 14 months ago by
Ram
43k • written 14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
358
views
News:
Course - Version Control for Researchers
VersionControl
GIT
Github
14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
506
views
News:
Course - INTRODUCTION TO PYTHON PROGRAMMING FOR BIOLOGISTS
Programming
Python
updated 14 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
396
views
News:
Eukaryotic Metabarcoding course
eDNA
Metabarcoding
updated 15 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
0
votes
3
replies
883
views
News:
NCBI update complete. Aspera users please update your client.
NCBI
Submissions
GenBank
14 months ago by
PeterC_NCBI
▴ 410
0
votes
0
replies
375
views
News:
Course - Mass Spectrometry and Proteomics in R/Bioconductor
Bioconductor
MassSpectrometry
R
Proteomics
15 months ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
588
views
News:
Course - Machine Learning in R (for omics data)
Genomics
omics
MachineLearning
R
15 months ago by
carlopecoraro2
★ 2.5k
2
votes
0
replies
420
views
News:
Course - Reproducibility in Bioinformatics
Reproducibility
updated 15 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
382
views
News:
course - Multivariate data analysis with R and vegan
Statistics
MultivariateAnalysis
R
vegan
15 months ago by
carlopecoraro2
★ 2.5k
0
votes
2
replies
1.1k
views
News:
Online Course - A Practical Introduction to NGS Data Analysis (February 01-03, 2023)
NGS
DNAseq
variant-calling
RNAseq
15 months ago by
David Langenberger
11k
0
votes
0
replies
468
views
News:
Bioinformatics courses in February
Genomics
Bioinformatics-Training
updated 10 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.3k
views
News:
Reminder: NCBI Aspera access, update Aspera Connect by Feb 1, 2023
Aspera
NCBI
SRA
GenBank
15 months ago by
PeterC_NCBI
▴ 410
1
vote
2
replies
682
views
News:
Course: Network Analysis in R
NetworkAnalyis
R
15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
476
views
News:
de novo RNA-seq Analysis Workshop
virtual
workshop
rna
transcriptome
15 months ago by
mia.nahom
▴ 10
0
votes
0
replies
621
views
News:
Genomic Prediction course
Selective-Breeding
Genomic-Prediction
updated 15 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
690
views
News:
course: Meta-analysis in R
Statistics
MetaAnalysis
R
15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
554
views
News:
GSEA in R/Bioconductor course
Bioconductor
R
GSEA
GeneSetEnrichmentAnalysis
15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
937
views
News:
For NCBI Aspera access, update Aspera Connect by Feb 1, 2023
Aspera
NCBI
GenBank
15 months ago by
PeterC_NCBI
▴ 410
0
votes
0
replies
472
views
News:
Metabarcoding in Microbial Ecology
Metabarcoding
Qiime2
16S
MicrobialEcology
R
15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
442
views
News:
Metagenomics tools recommeder system
NGS
Metagenomics
Recommender-system
updated 15 months ago by
Ram
43k • written 15 months ago by
KATA
• 0
0
votes
0
replies
744
views
News:
Hands-On NGS Data Analysis Workshops 2023
NGS
Workshop
RNA-Seq
DNA-Seq
15 months ago by
David Langenberger
11k
1
vote
5
replies
1.1k
views
News:
Cancer Genomics course - 2 seats left
Genomics
Cancer-Genomics
R
updated 15 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
450
views
News:
Course on Generalised Additive Models In R
Statistics
GAMs
R
15 months ago by
carlopecoraro2
★ 2.5k
0
votes
1
reply
654
views
News:
Sex Chromosome Evolution course
Genomics
Sex-Chromosome-Evolution
updated 15 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
1
vote
2
replies
1.8k
views
News:
New chat server (Discord) for bioinformatics
community
15 months ago by
Samuel Lampa
★ 1.3k
0
votes
0
replies
650
views
News:
Online course - Genome Assembly and Annotation
Long-reads
Genome-Annotation
Biodiversity
Genome-Assembly
updated 15 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
1
vote
3
replies
922
views
News:
NCBI BLAST ClusteredNR database now available for blastx and PSI-BLAST searches
PSI-BLAST
blastx
BLAST
NCBI
ClusteredNR
15 months ago by
PeterC_NCBI
▴ 410
0
votes
0
replies
595
views
News:
Winter School in Bioinformatics - last seats available
Genomics
Unix
RNA-seq
docker
updated 15 months ago by
Ram
43k • written 16 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
509
views
News:
Virtual RNA-seq Analysis (Model Organism) Workshop
virtual
expression
rna-seq
analysis
workshop
16 months ago by
mia.nahom
▴ 10
1,000 results • Page
5 of 20
Recent Votes
Comment: How to calculate identity percentage between proteins contained in a FASTA file?
Comment: How to calculate identity percentage between proteins contained in a FASTA file?
Answer: How to use limma to find differentially expressed genes in response to a continu
Answer: How to use limma to find differentially expressed genes in response to a continu
Comment: FastQC Quality per tile and per sequence behaving strange after using Cutadapt
Comment: FastQC Quality per tile and per sequence behaving strange after using Cutadapt
Comment: FastQC Quality per tile and per sequence behaving strange after using Cutadapt
Recent Locations •
All
India,
just now
United States,
just now
Syracuse, NY, United States,
just now
Norway,
2 minutes ago
Denmark,
6 minutes ago
United States,
8 minutes ago
Mexico,
8 minutes ago
Recent Awards •
All
Popular Question
to
v.berriosfarias
▴ 140
Popular Question
to
scarey
• 0
Scholar
to
e.r.zakiev
▴ 200
Popular Question
to
Bine
▴ 60
Popular Question
to
Deepak Tanwar
★ 4.2k
Popular Question
to
Chris
▴ 260
Popular Question
to
Trivas
★ 1.7k
Recent Replies
Comment: Programmatically retrieving positions of protein active site residues
by
Wayne
★ 2.0k
Wow, I was shocked at this AI answer that looks to be a good start for using UniProt. Sharing it in case it is useful. (It will work in ses…
Comment: NGS forensics: how to know if data is fabricated
by
noodle
▴ 570
> Can you clarify what you mean by "100% of reads pass cutadapt, even > though 70% of reads contain adapters and get trimmed. The header o…
Comment: Software to separate reads from different individuals
by
GenoMax
141k
If you have independent information available (e.g. genotype data for both individuals) then you *may* be able to assign reads based on the…
Answer: Extract protein sequence
by
Matthias Zepper
4.5k
You didn't mention what kind of organism you are working with and what kind of protein you are looking for? If it happens to be a microbia…
Comment: How to use limma to find differentially expressed genes in response to a continu
by
pairedttest
▴ 10
Thank you Gordon for your expertise. One question that I have now that I have a list of DE genes is how to interpret logFC of this continuo…
Comment: FastQC Quality per tile and per sequence behaving strange after using Cutadapt
by
salias
• 0
Yes I plan to use QIIME2, but I'm Cutadapting outside QIIME so its easier to MultiQC without importing/unzipping QZAs (and QIIME2 importing…
Comment: FastQC Quality per tile and per sequence behaving strange after using Cutadapt
by
GenoMax
141k
> 3' adapters were removed aprox. 90 times each one, so there sohuld not be read-through at all here Then you have data that has poor Q sc…
Comment: FastQC Quality per tile and per sequence behaving strange after using Cutadapt
by
salias
• 0
Following your advice, I checked the primer and adapters sequences and edited the question accordingly
Comment: How should I make kallisto indexes?
by
dsull
★ 5.9k
We can't phase them out per se, because ``kallisto index`` is still the engine responsible for creating the index under the hood (and there…
Comment: When to use .vcf or .gvcf files from GATK HaplotypeCaller?
by
Medhat
9.7k
"./." in your gVCF files typically indicates a lack of information or uncertainty about the genotype at that particular position. This co…
Comment: FastQC Quality per tile and per sequence behaving strange after using Cutadapt
by
salias
• 0
Fungal ITS2 region (length is really variable so read-through can be an issue)
Answer: Is it possible to bulk download files from GEO repository?
by
noodle
▴ 570
Also try the NCBI AWS bucket transfer tool. It's extremely convenient, however it's not instantaneous and you need to have a (paid) AWS acc…
Comment: FastQC Quality per tile and per sequence behaving strange after using Cutadapt
by
GenoMax
141k
Check a random sampling of reads to make sure the adapters are being removed. You may also want to blast a few reads to ensure that there i…
Comment: FastQC Quality per tile and per sequence behaving strange after using Cutadapt
by
salias
• 0
Many thanks for your comment. If read-through is happening, shouldn't Cutadapt being taking care of that there? I provided to the Cutadapt …
Comment: How should I make kallisto indexes?
by
bioinfo
▴ 150
Thank you. I will read the documentation you attached. Are you going to slowly phase out the not kb ref commands? Also, does the t2g.txt fi…
Traffic: 2607 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6