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A: Meme-Tools: Bit score
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Comment: error in R code
DEXSeq multiple time points
How to find the most frequent alternative-splicing event from DEXSEQ data?
Comment: Design matrix Differential expression analysis
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Answer: Quetion regarding WGCNA
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deepak180001
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Thank you for your reply andres.firrincieli. I have attached the PCA plot of the expression data used in the WGCNA. ![enter imag…
Comment: Design matrix Differential expression analysis
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SHN
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Got it, thank you for your response. SN
Comment: How to interpret DEXseq results in therms of significance
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Sara
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Hi, I used write.table(as.data.frame(DEXSeqResults(MyObj)), "Results.tsv", quote=FALSE, sep="\t", dec=".") to save the result but I recei…
Comment: Tissue-specific DEG analysis with DEseq2
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Can I ask what do you exactly mean by same experiment? If you are talking about the same donor and the same procedure, unfortunately, not a…
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Find someone with computer skills near you and consult them. From your posts on the forum, it's clear that you need help at a level that we…
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This is not going to work no matter what program you use since the chromosome identifiers in your GTF (`MN908947.3 `) do not match your BA…
Comment: install.packages("imudata") - package ‘imudata’ is not available for this versio
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Read the answers in the post, understand them and try to implement them.
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t.montserrat.ayuso
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Just using the normalized expression of Malat1 works.
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Awesome, thank you for the concise and straight-forward answer!
Comment: error in R code
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ATpoint
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Look, before you keep posting these sorts of questions and might gross of users, please read and follow https://www.biostars.org/p/357878/ …
Comment: Gene Specific coverage from WGS data
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1769mkc
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"Also if is there any other quick way to find gene specific coverage" can you give some example so that its bit more clear what do you mean…
Answer: Tissue-specific DEG analysis with DEseq2
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ATpoint
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I assume that all data are from the same experiment, without batch effects and can thus be quantitiatively compared: Many ways to do thi…
Comment: install.packages("imudata") - package ‘imudata’ is not available for this versio
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snajafy
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I am facing the same problem and I don't know how to solve the problem,....
Comment: install.packages("imudata")
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zx8754
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[How should I deal with "package 'xxx' is not available (for R version x.y.z)" warning?](https://stackoverflow.com/q/25721884/680068)
Answer: install.packages("imudata")
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ATpoint
82k
Welcome to this community. Please learn the most important lesson right away which is reading answers and learning from it. Users gave you …
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