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Recent Votes
- A: Affymatrix microarray data do not have normal distribution after normalization (
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- A: Addin gene information to VCF file
- Forward and reverse single cell data analysis
- C: How to match data from file 2 on 1st with deleting unmatched data
- C: low assignment reads % in RNA-seq
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Recent Replies
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C: Forward and reverse single cell data analysis by
EagleEye ♦ 6.8k
I think you meant "`zcat`"
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C: finding bacterial genes in dataset by
GenoMax ♦ 96k
You could simply take the sequence of the gene you are interested in and search against this data...
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A: How to find the secreted protein tags by
Elisabeth Gasteiger • 1.9k
You can upload your list of genes or other identifiers to the UniProt IDmapping tool and map to U...
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C: Forward and reverse single cell data analysis by
GenoMax ♦ 96k
Are you still planning to use `cellranger`?
-
A: Forward and reverse single cell data analysis by
ATpoint ♦ 45k
Just use `cat` to merge the R1s and the R2s respectively. `cat R1_lane1.fastq.gz R1_lane2.fastq....
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C: Batch download genome feature file by RefSeq by
vkkodali • 2.4k
Yes, you would have to get the GCF accessions for the nucleotide accessions using `elink`. Entrez...
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C: LImma design matrix and contrast matrix creation by
husain.poonawala • 0
Since they are 2 channel experiments, the control is the other channel. There is a common referen...
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C: low assignment reads % in RNA-seq by
lakhujanivijay ♦ 5.4k
can you post the alignment summary metrics for example like [this][1] [1]: https://www.biosta...
-
A: Remove a row if two specific columns have similar/share contents by
waqasnayab • 200
Thanks Pierre, it worked like a charm! Regards, Waqas.
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C: Lanes in the context of RNA-SEQ data by
Sammy • 10
Thank you, GenoMax :)
-
A: Web-based tool for 3D visualization of proteins given a .pbd file by
rajpal22288 • 50
But, why do you want to visualize PDB files online? There are pretty good offline tools for this ...
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A: Remove a row if two specific columns have similar/share contents by
Pierre Lindenbaum ♦ 134k
awk -F '\t' '/^#/ {print;next;} {N=split($5,a,/[,]/);P=1;for(i=1;i<=N;i++) {if(a[i]==$4) {...
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