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1
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1
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154
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1
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tool_dependencies.xml Not Working - Why?
galaxy assembly dependency tool xml written 8 weeks ago by mltaylor211 • 0 • updated 8 days ago by martenson • 380
0
votes
1
answer
170
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1
answer
URL for NCBI Efetch + XML with full annotation table
ncbi xml efetch eutils annotation written 9 weeks ago by Pierre Lindenbaum ♦ 96k • updated 9 weeks ago by genomax ♦ 32k
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0
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139
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0
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Edirect utility xtract conditional error question
edirect xtract xml written 3 months ago by him1532 • 0 • updated 3 months ago by genomax ♦ 32k
9
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5
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6.1k
views
9 follow
5
answers
Blast Text-Output To Xml Converter
xml blast conversion written 6.7 years ago by Leszek ♦ 3.7k • updated 3 months ago by Biostar ♦♦ 20
0
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0
answers
162
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0
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Downloading 'suspect' NCBI data with Eutils
ncbi xml genedocsum written 3 months ago by cheng#13# • 0
0
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1
answer
223
views
1
answer
Editing and saving KEGG pathway files
xml kegg cytoscape written 5 months ago by justp • 10 • updated 5 months ago by theobroma22 • 890
2
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1
answer
682
views
1
answer
How to convert xml file to txt file
table xml written 7 months ago by newbiebio • 60
5
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2
answers
287
views
2
answers
How to simply filter a xml file?
filter blast xml written 7 months ago by haro • 150 • updated 7 months ago by Alex Reynolds ♦ 20k
4
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2
answers
1.1k
views
5 follow
2
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How to access GeneCards via XML?
xml genecards written 3.2 years ago by bounlu • 100 • updated 8 months ago by support • 30
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0
answers
802
views
0
answers
Parsing residue numbers form PDB SIFTS XML files
pdb xml sfits R python written 19 months ago by bhadra4282 • 0 • updated 10 months ago by Biostar ♦♦ 20
1
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1
answer
424
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1
answer
How to parse NCBI Blast XML to retrieve "hsp_query-from in Biopython?
xml parse biopython written 10 months ago by philipp • 10 • updated 10 months ago by Markus • 200
7
votes
1
answer
398
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1
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how to include taxonomy information in blstx xml output ?
xml blastgrabber taxonomy in blast blast written 11 months ago by Farbod • 3.0k • updated 11 months ago by piet • 1.4k
1
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2
answers
714
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2
answers
Extract sequence of BLAST hits
xml blast written 11 months ago by ThePresident • 70
0
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0
answers
346
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0
answers
Problem with Cell Designer compatibility with SBML (xml) files
cell designer xml sbml compatibility written 15 months ago by myasemi15 • 0
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1
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323
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1
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where can I download a mzIdentML dataset
mzidentml xml database written 15 months ago by sureshhewabi • 0 • updated 15 months ago by natasha.sernova • 2.5k
1
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1
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2.6k
views
1
answer
How To Extract Desire Genes Blast Xml Result From A Big Blast Xml File
xml blast written 4.2 years ago by KJ Lim • 110 • updated 17 months ago by Shyam • 80
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2
answers
2.1k
views
2
answers
Parsing Blast Results In Java
biojava parsing blast xml written 3.8 years ago by weslfield • 80 • updated 18 months ago by Biostar ♦♦ 20
4
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2
answers
598
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2
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How to query nr database using a list of GI numbers to get xml files?
latest gi xml blast annotation written 19 months ago by grayapply2009 • 150 • updated 19 months ago by apt.university • 70
1
vote
1
answer
690
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1
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import stke pathway xml file into cytoscape
pathway xml network cytoscape written 21 months ago by pengchy • 350
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1
answer
902
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1
answer
Split a blastp xml output
xml blast split written 21 months ago by Stela Ribeiro • 10
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2
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1.2k
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2
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How to parse Blast output from new XML2 format with taxid and sciname?
xml sequence biopython blast parsing written 2.2 years ago by n8upham • 0 • updated 21 months ago by 5heikki ♦ 6.5k
2
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1
answer
755
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1
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Blast Tabular to XML
xml convert blast written 22 months ago by moranr • 210 • updated 22 months ago by michael.ante • 1.6k
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710
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0
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Problem using Krona Phylogeny to make xml file tree, get blank page
phylogeny xml krona blank written 2.1 years ago by cara78 • 10
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1
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1.4k
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1
answer
How To Retrieve Data From Jgi Automatically Given A Set Of Ids?
R api python xml written 3.7 years ago by Manu Prestat ♦ 3.8k • updated 2.1 years ago by ooddiittyy • 0
3
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1
answer
939
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1
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software advise: visualise the phylogenetic tree that uses bubbles on the branches to indicate abundance.
advise xml tree phylogenetic abundance written 2.1 years ago by cara78 • 10 • updated 2.1 years ago by jhc • 2.5k
5
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2
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2.3k
views
5 follow
2
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Url To Download Sra Experiment_Package Xml File Programmatically
sra xml download written 6.6 years ago by Tim • 320 • updated 2.1 years ago by Tom Koch • 100
7
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2
answers
1.6k
views
2
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Parse the Xml response from Entrez Db=bioproject Using Biopython eFetch
xml efetch entrez biopython parsing written 2.2 years ago by Prasad • 10 • updated 2.2 years ago by beegrackle • 90
8
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1
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7.2k
views
1
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Using Curl To Send Xml Post Request To Pdbe
pdb xml written 6.0 years ago by Mo Sander • 40 • updated 2.3 years ago by Biostar ♦♦ 20
21
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4
answers
4.6k
views
14 follow
4
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Parsing Pubchem Compound Records
pubchem xml database api written 5.6 years ago by Malachi Griffith ♦ 15k • updated 2.3 years ago by Biostar ♦♦ 20
0
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0
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811
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0
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Trying to extract per-index statistics from MiSeq's GenerateFASTQRunStatistics.xml file with XPath.
xml miseq written 2.5 years ago by Charles Plessy • 2.1k • updated 2.4 years ago by Biostar ♦♦ 20
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