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2
votes
1
answer
54
views
1
answer
How to efetch specific attributes from BioSamples?
ncbi xml eutils written 10 days ago by Arindam Ghosh • 150 • updated 10 days ago by Pierre Lindenbaum ♦ 116k
4
votes
1
answer
2.3k
views
6 follow
1
answer
How To Retrieve Data From Jgi Automatically Given A Set Of Ids?
R api python xml written 5.2 years ago by Manu Prestat ♦ 3.9k • updated 3 months ago by bison100 • 0
6
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2
answers
3.0k
views
5 follow
2
answers
Ncbi Taxonomy Database In Xml Format
xml taxonomy written 5.4 years ago by Ctanes • 70 • updated 3 months ago by Biostar ♦♦ 20
0
votes
1
answer
275
views
1
answer
Job: Hiring a Senior Health Data Analyst/Scientist in Maryland/D.C./Virginia Area
json sql job R sas xml written 3 months ago by Sherrie.Tsen • 0
3
votes
1
answer
335
views
1
answer
How to extract specific columns from Drugbank xml file
xml drugbank written 4 months ago by vasilislenis • 100 • updated 4 months ago by Pierre Lindenbaum ♦ 116k
1
vote
0
answers
354
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0
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Converting blastn output to VCF (for SNPs): what is the quickest way?
vcf xml blast snp convert written 9 months ago by Macspider • 2.7k
1
vote
2
answers
595
views
2
answers
How to parse a pubmed abstract that contains html tags or Unicode in python?
html python pubmed xml parsing written 10 months ago by aqsaawan.459 • 0 • updated 10 months ago by Pierre Lindenbaum ♦ 116k
1
vote
1
answer
334
views
1
answer
Some SNP XML document not available via an eutils query
xml snp eutils written 10 months ago by longoka • 30
0
votes
0
answers
415
views
0
answers
Creating pathway diagrams from xml file
pathway xml written 11 months ago by Natasha • 30
0
votes
0
answers
372
views
0
answers
Biopython NCBIXML Parsing - Field Parameter
xml parse biopython ncbixml written 12 months ago by maximilian.mayerhofer • 20
3
votes
1
answer
440
views
1
answer
Parsing Standalone Blast XML Output with Biopython on Linux
xml parse biopython blast written 12 months ago by maximilian.mayerhofer • 20 • updated 12 months ago by Pierre Lindenbaum ♦ 116k
2
votes
1
answer
416
views
1
answer
parse xml proteinpredict files
proteinpredict parse biopython xml written 13 months ago by Biojl • 1.6k • updated 13 months ago by Pierre Lindenbaum ♦ 116k
2
votes
1
answer
416
views
1
answer
How can I install xml development headers (version 2.9.1) and xz development headers(version 5.1.1) using ***sudo apt-get*** ?
xml antismash written 13 months ago by jth6974 • 10 • updated 13 months ago by WouterDeCoster ♦ 36k
0
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1
answer
569
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1
answer
Blast-XML and Biopython: extract query-anchored results (i.e. MSA)
xml multiple sequence alignment biopython blast written 15 months ago by LeWöps • 0 • updated 15 months ago by Peter ♦ 5.7k
0
votes
1
answer
470
views
1
answer
Nested loops write in xml
python loop biopython efetch xml written 17 months ago by Lilizine • 0
1
vote
1
answer
1.4k
views
1
answer
Parse Drugbank XML in R
gene xml drug R written 17 months ago by kakukeshi • 50 • updated 17 months ago by EverInEarnest • 30
1
vote
1
answer
707
views
1
answer
tool_dependencies.xml Not Working - Why?
galaxy assembly dependency tool xml written 20 months ago by mltaylor211 • 0 • updated 18 months ago by martenson • 380
0
votes
1
answer
852
views
1
answer
URL for NCBI Efetch + XML with full annotation table
ncbi xml efetch eutils annotation written 20 months ago by Pierre Lindenbaum ♦ 116k • updated 20 months ago by genomax ♦ 62k
0
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0
answers
547
views
0
answers
Edirect utility xtract conditional error question
edirect xtract xml written 21 months ago by him1532 • 0 • updated 21 months ago by genomax ♦ 62k
9
votes
5
answers
7.5k
views
9 follow
5
answers
Blast Text-Output To Xml Converter
xml blast conversion written 8.2 years ago by Leszek ♦ 4.0k • updated 21 months ago by Biostar ♦♦ 20
0
votes
0
answers
491
views
0
answers
Downloading 'suspect' NCBI data with Eutils
ncbi xml genedocsum written 21 months ago by cheng#13# • 0
0
votes
1
answer
779
views
1
answer
Editing and saving KEGG pathway files
xml kegg cytoscape written 23 months ago by justp • 10 • updated 23 months ago by theobroma22 • 1.1k
2
votes
1
answer
1.8k
views
1
answer
How to convert xml file to txt file
table xml written 2.1 years ago by newbiebio • 80
5
votes
2
answers
716
views
2
answers
How to simply filter a xml file?
filter blast xml written 2.1 years ago by vmicrobio • 240 • updated 2.1 years ago by Alex Reynolds ♦ 27k
6
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2
answers
2.2k
views
5 follow
2
answers
How to access GeneCards via XML?
xml genecards written 4.7 years ago by bounlu • 170 • updated 2.2 years ago by support • 40
0
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0
answers
1.4k
views
0
answers
Parsing residue numbers form PDB SIFTS XML files
pdb xml sfits R python written 3.1 years ago by bhadra4282 • 0 • updated 2.3 years ago by Biostar ♦♦ 20
1
vote
1
answer
1.3k
views
1
answer
How to parse NCBI Blast XML to retrieve "hsp_query-from in Biopython?
xml parse biopython written 2.4 years ago by philipp • 10 • updated 2.4 years ago by Markus • 200
7
votes
1
answer
939
views
1
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how to include taxonomy information in blstx xml output ?
xml blastgrabber taxonomy in blast blast written 2.4 years ago by Farbod • 3.2k • updated 2.4 years ago by piet • 1.6k
1
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2
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1.6k
views
2
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Extract sequence of BLAST hits
xml blast written 2.4 years ago by ThePresident • 100
0
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0
answers
709
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0
answers
Problem with Cell Designer compatibility with SBML (xml) files
cell designer xml sbml compatibility written 2.7 years ago by myasemi15 • 0
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