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0
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1
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1.4k
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Link methylation patterns to restriction enzymes
methylation PacBio
8.5 years ago by mschmid ▴ 180
0
votes
1
reply
1.7k
views
Pan- / coregenome studies - exclude plasmids?
comparative genomics pan/coregenome
8.5 years ago by mschmid ▴ 180
0
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0
replies
2.6k
views
Comment: C: How to retrieve all hmm from TIGRFAM for Cas (CRISPR-associated) proteins?
8.5 years ago by mschmid ▴ 180
0
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0
replies
2.9k
views
Comment: C: bbmap: Order of reference genomes seems to matter
8.6 years ago by mschmid ▴ 180
3
votes
1
reply
1.8k
views
Draw phylogenetic tree with zoom into a specific clade
phylogeny
updated 8.6 years ago by 166k • written 8.6 years ago by ▴ 180
0
votes
1
reply
11k
views
Comment: C: get protein sequences from genbank
8.6 years ago by mschmid ▴ 180
0
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1
reply
2.9k
views
Comment: C: bbmap: Order of reference genomes seems to matter
8.6 years ago by mschmid ▴ 180
0
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0
replies
1.6k
views
Who has tried bcgTree - Comments?
core genome aligment phylogeny
8.6 years ago by mschmid ▴ 180
0
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1
reply
1.3k
views
bwa: get all aligment positions of a read
bwa mapping
8.6 years ago by mschmid ▴ 180
0
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6
replies
2.9k
views
bbmap: Order of reference genomes seems to matter
bbmap mapping illumina
8.6 years ago by mschmid ▴ 180
0
votes
3
replies
3.1k
views
Find telomeres and centromeres in de novo sequenced fungi
genome
updated 8.6 years ago by 7.6k • written 9.6 years ago by ▴ 180
0
votes
1
reply
2.9k
views
Comment: C: bbmap: Order of reference genomes seems to matter
8.6 years ago by mschmid ▴ 180
0
votes
0
replies
3.1k
views
Comment: C: Find telomeres and centromeres in de novo sequenced fungi
8.6 years ago by mschmid ▴ 180
2
votes
7
replies
6.0k
views
All vs. all pairwise sequence aligment
alignment local fasta
updated 8.6 years ago by ★ 1.1k • written 8.6 years ago by ▴ 180
0
votes
1
reply
6.0k
views
Comment: C: All vs. all pairwise sequence aligment
8.6 years ago by mschmid ▴ 180
0
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0
replies
6.0k
views
Comment: C: All vs. all pairwise sequence aligment
8.6 years ago by mschmid ▴ 180
0
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1
reply
2.1k
views
Comment: C: samtoroc.sh -- no truePositive hits
8.7 years ago by mschmid ▴ 180
2
votes
4
replies
2.1k
views
samtoroc.sh -- no truePositive hits
bbmap illumina roc
updated 8.7 years ago by 20k • written 8.7 years ago by ▴ 180
2
votes
6
replies
2.1k
views
How to further investigate into genomic island with only hypothetical proteins
annotation genomic island bacteria
updated 8.7 years ago by 56k • written 8.7 years ago by ▴ 180
0
votes
0
replies
2.1k
views
Comment: C: How to further investigate into genomic island with only hypothetical proteins
8.7 years ago by mschmid ▴ 180
0
votes
0
replies
2.1k
views
Comment: C: How to further investigate into genomic island with only hypothetical proteins
8.7 years ago by mschmid ▴ 180
0
votes
1
reply
2.1k
views
Comment: C: How to further investigate into genomic island with only hypothetical proteins
8.7 years ago by mschmid ▴ 180
2
votes
1
reply
1.7k
views
Database for Antibiotic/Antimicrobial products of Bacteria
database antibiotic
updated 9.1 years ago by 20 • written 9.8 years ago by ▴ 180
38
votes
31
replies
4.6k
views
10 follow
Forum: To the Biologists out there: What bioinf tool are you missing?
education career
updated 2.5 years ago by 45k • written 9.2 years ago by ▴ 180
4
votes
2
replies
2.6k
views
Correct substitution model for yeast - RAxML
raxml substitution model tree
updated 9.2 years ago by 5.3k • written 9.2 years ago by ▴ 180
1
vote
1
reply
2.1k
views
BioPython: How to set the order of qualifiers
Genbank biopython
updated 9.2 years ago by 6.0k • written 9.3 years ago by ▴ 180
0
votes
1
reply
1.9k
views
What is limiting the read size of Pacbio SMRT sequencing
NGS pacbio readlength
9.4 years ago by mschmid ▴ 180
3
votes
1
reply
1.6k
views
Find occurrence of short pattern in fasta with several sequences and ouput it to bam
alignment
updated 9.6 years ago by 27k • written 9.6 years ago by ▴ 180
2
votes
5
replies
2.8k
views
How to judge severity of variants in genes
variants SNP annotation
updated 3.2 years ago by 45k • written 9.9 years ago by ▴ 180
0
votes
0
replies
2.4k
views
How to find pseudogenes in bacteria
annotation
updated 3.2 years ago by 45k • written 9.7 years ago by ▴ 180
0
votes
0
replies
2.5k
views
Comment: C: SMRT analysis- what is difference between RS_HGAP_Assembly.2 vs RS_HGAP_Assembly
9.8 years ago by mschmid ▴ 180
0
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1
reply
2.6k
views
Comment: C: Is there any pairing info Genome <-> Plasmid in Genbank available?
9.9 years ago by mschmid ▴ 180
1
vote
3
replies
2.6k
views
Is there any pairing info Genome <-> Plasmid in Genbank available?
genbank genome plasmid
updated 3.1 years ago by 45k • written 9.9 years ago by ▴ 180
0
votes
1
reply
2.8k
views
Comment: C: How to judge severity of variants in genes
9.9 years ago by mschmid ▴ 180
0
votes
0
replies
3.0k
views
Comment: C: Where to put start for assembled genome/plasmid
10.0 years ago by mschmid ▴ 180
4
votes
4
replies
3.0k
views
Where to put start for assembled genome/plasmid
Assembly genome sequencing
updated 3.1 years ago by 45k • written 10.0 years ago by ▴ 180
0
votes
0
replies
4.5k
views
Comment: C: Is this mate pair insert size distribution to broad?
10.0 years ago by mschmid ▴ 180
0
votes
1
reply
4.5k
views
Comment: C: Is this mate pair insert size distribution to broad?
10.0 years ago by mschmid ▴ 180
0
votes
1
reply
4.5k
views
Comment: C: Is this mate pair insert size distribution to broad?
10.0 years ago by mschmid ▴ 180
2
votes
9
replies
4.5k
views
Is this mate pair insert size distribution to broad?
spades illumina mate-pair
updated 3.1 years ago by 45k • written 10.0 years ago by ▴ 180
0
votes
1
reply
2.8k
views
Comment: C: Illumina PE - what are causes for coverage drops?
10.0 years ago by mschmid ▴ 180
8
votes
3
replies
2.8k
views
Illumina PE - what are causes for coverage drops?
illumina coverage paired end
updated 10.0 years ago by ★ 3.0k • written 10.0 years ago by ▴ 180
0
votes
0
replies
2.6k
views
Comment: C: Assemble mix of two plasmids which have partially similar sequence
10.0 years ago by mschmid ▴ 180
2
votes
2
replies
2.6k
views
Assemble mix of two plasmids which have partially similar sequence
illumina Assembly spades plasmids
updated 3.0 years ago by 45k • written 10.0 years ago by ▴ 180
0
votes
2
replies
5.3k
views
Where to get some example metagenomics data?
metagenomics database
updated 3.0 years ago by 45k • written 10.1 years ago by ▴ 180
0
votes
0
replies
3.1k
views
Comment: Comment: How to get subset from NCBI databases using Accession/GI
updated 3.0 years ago by 45k • written 10.1 years ago by ▴ 180
0
votes
1
reply
3.1k
views
Comment: Comment: How to get subset from NCBI databases using Accession/GI
updated 3.0 years ago by 45k • written 10.1 years ago by ▴ 180
3
votes
4
replies
3.1k
views
How to get subset from NCBI databases using Accession/GI
NCBI blast database
updated 3.0 years ago by 45k • written 10.1 years ago by ▴ 180
0
votes
0
replies
3.0k
views
Comment: C: Nice open source alternative to "contig viewer" in SeqMan Pro
10.1 years ago by mschmid ▴ 180
1
vote
2
replies
3.0k
views
Nice open source alternative to "contig viewer" in SeqMan Pro
SeqMan contig paired end
updated 10.1 years ago by ▴ 610 • written 10.1 years ago by ▴ 180
106 results • Page 2 of 3
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