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1
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1.1k
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Link methylation patterns to restriction enzymes
methylation PacBio
7.1 years ago by mschmid ▴ 180
0
votes
1
reply
1.4k
views
Pan- / coregenome studies - exclude plasmids?
comparative genomics pan/coregenome
7.1 years ago by mschmid ▴ 180
0
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0
replies
2.1k
views
Comment: C: How to retrieve all hmm from TIGRFAM for Cas (CRISPR-associated) proteins?
7.1 years ago by mschmid ▴ 180
0
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0
replies
2.4k
views
Comment: C: bbmap: Order of reference genomes seems to matter
7.2 years ago by mschmid ▴ 180
3
votes
1
reply
1.6k
views
Draw phylogenetic tree with zoom into a specific clade
phylogeny
updated 7.2 years ago by 161k • written 7.2 years ago by ▴ 180
0
votes
1
reply
9.6k
views
Comment: C: get protein sequences from genbank
7.2 years ago by mschmid ▴ 180
0
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1
reply
2.4k
views
Comment: C: bbmap: Order of reference genomes seems to matter
7.2 years ago by mschmid ▴ 180
0
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0
replies
1.4k
views
Who has tried bcgTree - Comments?
core genome aligment phylogeny
7.2 years ago by mschmid ▴ 180
0
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1
reply
1.2k
views
bwa: get all aligment positions of a read
bwa mapping
7.2 years ago by mschmid ▴ 180
0
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6
replies
2.4k
views
bbmap: Order of reference genomes seems to matter
bbmap mapping illumina
7.2 years ago by mschmid ▴ 180
0
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3
replies
2.7k
views
Find telomeres and centromeres in de novo sequenced fungi
genome
updated 7.2 years ago by 7.5k • written 8.2 years ago by ▴ 180
0
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1
reply
2.4k
views
Comment: C: bbmap: Order of reference genomes seems to matter
7.2 years ago by mschmid ▴ 180
0
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0
replies
2.7k
views
Comment: C: Find telomeres and centromeres in de novo sequenced fungi
7.2 years ago by mschmid ▴ 180
2
votes
7
replies
4.8k
views
All vs. all pairwise sequence aligment
alignment local fasta
updated 7.2 years ago by ★ 1.1k • written 7.2 years ago by ▴ 180
0
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1
reply
4.8k
views
Comment: C: All vs. all pairwise sequence aligment
7.2 years ago by mschmid ▴ 180
0
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0
replies
4.8k
views
Comment: C: All vs. all pairwise sequence aligment
7.2 years ago by mschmid ▴ 180
0
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1
reply
1.7k
views
Comment: C: samtoroc.sh -- no truePositive hits
7.3 years ago by mschmid ▴ 180
2
votes
4
replies
1.7k
views
samtoroc.sh -- no truePositive hits
bbmap illumina roc
updated 7.3 years ago by 20k • written 7.3 years ago by ▴ 180
2
votes
6
replies
1.6k
views
How to further investigate into genomic island with only hypothetical proteins
annotation genomic island bacteria
updated 7.3 years ago by 54k • written 7.3 years ago by ▴ 180
0
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0
replies
1.6k
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Comment: C: How to further investigate into genomic island with only hypothetical proteins
7.3 years ago by mschmid ▴ 180
0
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0
replies
1.6k
views
Comment: C: How to further investigate into genomic island with only hypothetical proteins
7.3 years ago by mschmid ▴ 180
0
votes
1
reply
1.6k
views
Comment: C: How to further investigate into genomic island with only hypothetical proteins
7.3 years ago by mschmid ▴ 180
2
votes
1
reply
1.5k
views
Database for Antibiotic/Antimicrobial products of Bacteria
database antibiotic
updated 7.7 years ago by 20 • written 8.4 years ago by ▴ 180
38
votes
31
replies
2.9k
views
10 follow
Forum: To the Biologists out there: What bioinf tool are you missing?
education career
updated 13 months ago by 43k • written 7.8 years ago by ▴ 180
4
votes
2
replies
2.2k
views
Correct substitution model for yeast - RAxML
raxml substitution model tree
updated 7.8 years ago by 5.3k • written 7.8 years ago by ▴ 180
1
vote
1
reply
1.8k
views
BioPython: How to set the order of qualifiers
Genbank biopython
updated 7.8 years ago by 6.0k • written 7.9 years ago by ▴ 180
0
votes
1
reply
1.6k
views
What is limiting the read size of Pacbio SMRT sequencing
NGS pacbio readlength
8.0 years ago by mschmid ▴ 180
3
votes
1
reply
1.3k
views
Find occurrence of short pattern in fasta with several sequences and ouput it to bam
alignment
updated 8.2 years ago by 26k • written 8.2 years ago by ▴ 180
2
votes
5
replies
2.2k
views
How to judge severity of variants in genes
variants SNP annotation
updated 21 months ago by 43k • written 8.5 years ago by ▴ 180
0
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0
replies
2.2k
views
How to find pseudogenes in bacteria
annotation
updated 21 months ago by 43k • written 8.3 years ago by ▴ 180
0
votes
0
replies
2.1k
views
Comment: C: SMRT analysis- what is difference between RS_HGAP_Assembly.2 vs RS_HGAP_Assembly
8.4 years ago by mschmid ▴ 180
0
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1
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2.2k
views
Comment: C: Is there any pairing info Genome <-> Plasmid in Genbank available?
8.5 years ago by mschmid ▴ 180
1
vote
3
replies
2.2k
views
Is there any pairing info Genome <-> Plasmid in Genbank available?
genbank genome plasmid
updated 20 months ago by 43k • written 8.5 years ago by ▴ 180
0
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1
reply
2.2k
views
Comment: C: How to judge severity of variants in genes
8.5 years ago by mschmid ▴ 180
0
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0
replies
2.4k
views
Comment: C: Where to put start for assembled genome/plasmid
8.6 years ago by mschmid ▴ 180
4
votes
4
replies
2.4k
views
Where to put start for assembled genome/plasmid
Assembly genome sequencing
updated 20 months ago by 43k • written 8.6 years ago by ▴ 180
0
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0
replies
3.8k
views
Comment: C: Is this mate pair insert size distribution to broad?
8.6 years ago by mschmid ▴ 180
0
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1
reply
3.8k
views
Comment: C: Is this mate pair insert size distribution to broad?
8.6 years ago by mschmid ▴ 180
0
votes
1
reply
3.8k
views
Comment: C: Is this mate pair insert size distribution to broad?
8.6 years ago by mschmid ▴ 180
2
votes
9
replies
3.8k
views
Is this mate pair insert size distribution to broad?
spades illumina mate-pair
updated 20 months ago by 43k • written 8.6 years ago by ▴ 180
0
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1
reply
2.4k
views
Comment: C: Illumina PE - what are causes for coverage drops?
8.6 years ago by mschmid ▴ 180
8
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3
replies
2.4k
views
Illumina PE - what are causes for coverage drops?
illumina coverage paired end
updated 8.6 years ago by ★ 3.0k • written 8.6 years ago by ▴ 180
0
votes
0
replies
2.0k
views
Comment: C: Assemble mix of two plasmids which have partially similar sequence
8.6 years ago by mschmid ▴ 180
2
votes
2
replies
2.0k
views
Assemble mix of two plasmids which have partially similar sequence
illumina Assembly spades plasmids
updated 19 months ago by 43k • written 8.6 years ago by ▴ 180
0
votes
2
replies
4.5k
views
Where to get some example metagenomics data?
metagenomics database
updated 19 months ago by 43k • written 8.7 years ago by ▴ 180
0
votes
0
replies
2.7k
views
Comment: Comment: How to get subset from NCBI databases using Accession/GI
updated 19 months ago by 43k • written 8.7 years ago by ▴ 180
0
votes
1
reply
2.7k
views
Comment: Comment: How to get subset from NCBI databases using Accession/GI
updated 19 months ago by 43k • written 8.7 years ago by ▴ 180
3
votes
4
replies
2.7k
views
How to get subset from NCBI databases using Accession/GI
NCBI blast database
updated 19 months ago by 43k • written 8.7 years ago by ▴ 180
0
votes
0
replies
2.6k
views
Comment: C: Nice open source alternative to "contig viewer" in SeqMan Pro
8.7 years ago by mschmid ▴ 180
1
vote
2
replies
2.6k
views
Nice open source alternative to "contig viewer" in SeqMan Pro
SeqMan contig paired end
updated 8.7 years ago by ▴ 600 • written 8.7 years ago by ▴ 180
106 results • Page 2 of 3
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