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Comment: C: How can I identify which read is optical duplicate in SAM file?
updated 5.8 years ago by 45k • written 9.9 years ago by ▴ 90
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0
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1.5k
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How to get overlap count (in basepair) of two IRange objects?
R IRanges
7.7 years ago by Tori ▴ 90
0
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1
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3.4k
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Comment: C: How to create genomic windows in R?
8.6 years ago by Tori ▴ 90
0
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0
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3.4k
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Comment: C: How to create genomic windows in R?
8.6 years ago by Tori ▴ 90
3
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4
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3.4k
views
How to create genomic windows in R?
R DNAmethylation
updated 8.6 years ago by 6.6k • written 8.6 years ago by ▴ 90
0
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2
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5.1k
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Comment: C: Do I have to use beta-values/m-values for RRBS/WGBS data ?
8.6 years ago by Tori ▴ 90
2
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8
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5.1k
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Do I have to use beta-values/m-values for RRBS/WGBS data ?
RRBS WGBS Methylation
updated 8.6 years ago by 105k • written 8.6 years ago by ▴ 90
1
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1
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2.7k
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How can I get gene annotations for hg38 in R?
annotation hg38 R
updated 8.8 years ago by 48k • written 8.8 years ago by ▴ 90
0
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1
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4.1k
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Conversion effinciency issue in whole genome bisulfite sequencing data.
wgbs bismark conversion-efficiency
updated 3.1 years ago by 45k • written 9.8 years ago by ▴ 90
0
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1
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4.6k
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Comment: C: How can I identify which read is optical duplicate in SAM file?
9.9 years ago by Tori ▴ 90
0
votes
1
reply
4.6k
views
Comment: C: How can I identify which read is optical duplicate in SAM file?
9.9 years ago by Tori ▴ 90
2
votes
7
replies
4.6k
views
How can I identify which read is optical duplicate in SAM file?
sam picard
updated 3.1 years ago by 45k • written 9.9 years ago by ▴ 90
22
votes
4
replies
7.7k
views
6 follow
Why 50bp Illumina run produces 51bp long sequencs?
illumina next-gen
updated 4.5 years ago by ▴ 290 • written 9.9 years ago by ▴ 90
3
votes
1
reply
7.6k
views
How can I annotate GRanges object in R with refSeqID, gene symbol, description and entrezID?
methylkit granges R
updated 2.7 years ago by 45k • written 10.3 years ago by ▴ 90
0
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2
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8.5k
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Comment: C: How can I calculate bisulfite conversion rate from RRBS data?
10.5 years ago by Tori ▴ 90
0
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2
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8.5k
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Comment: Comment: How can I calculate bisulfite conversion rate from RRBS data?
updated 3.3 years ago by 45k • written 10.5 years ago by ▴ 90
0
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1
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8.5k
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Comment: C: How can I calculate bisulfite conversion rate from RRBS data?
10.5 years ago by Tori ▴ 90
0
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1
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8.5k
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Comment: C: How can I calculate bisulfite conversion rate from RRBS data?
10.5 years ago by Tori ▴ 90
6
votes
13
replies
8.5k
views
How can I calculate bisulfite conversion rate from RRBS data?
RRBS
updated 3.3 years ago by 45k • written 10.5 years ago by ▴ 90
0
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0
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1.6k
views
How to find mutations occuring in homozygoud region?
gatk
10.8 years ago by Tori ▴ 90
0
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1
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4.3k
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Comment: C: How to caclulate ChIP-Seq coverage?
10.8 years ago by Tori ▴ 90
1
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4
replies
4.3k
views
How to caclulate ChIP-Seq coverage?
ChIP-Seq
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 90
3
votes
1
reply
2.7k
views
How can I check library diversity in ChIPSeq data ?
ChIP-Seq
updated 10.9 years ago by 15k • written 10.9 years ago by ▴ 90
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