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0
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4.0k
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Comment: C: TMM normalized TPM
4.7 years ago by firestar ★ 1.7k
0
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1
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4.0k
views
Comment: C: TMM normalized TPM
4.7 years ago by firestar ★ 1.7k
0
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2
replies
4.0k
views
Comment: C: Gene length corrected TMM normalized data
4.7 years ago by firestar ★ 1.7k
0
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0
replies
8.5k
views
Comment: C: Seurat: Assay to use for differential expression in an integrated data
4.7 years ago by firestar ★ 1.7k
2
votes
2
replies
8.5k
views
Seurat: Assay to use for differential expression in an integrated data
seurat 10x single-cell RNA-Seq
4.7 years ago by firestar ★ 1.7k
0
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0
replies
4.2k
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Comment: C: Merging integrated datasets
4.8 years ago by firestar ★ 1.7k
0
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2
replies
4.2k
views
Merging integrated datasets
single-cell RNA-Seq Seurat R integration
4.8 years ago by firestar ★ 1.7k
0
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0
replies
6.3k
views
Comment: C: 10x to cloupe
4.9 years ago by firestar ★ 1.7k
48
votes
15
replies
20k
views
10 follow
DESeq2 compare all levels
differential-gene-expression RNA-Seq DESeq2
updated 19 months ago by • 0 • written 7.3 years ago by ★ 1.7k
1
vote
0
replies
1.4k
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Comment: C: Evaluate genome annotation quality
5.2 years ago by firestar ★ 1.7k
1
vote
2
replies
1.4k
views
Evaluate genome annotation quality
annotation genome
updated 5.2 years ago by ▴ 540 • written 5.2 years ago by ★ 1.7k
3
votes
1
reply
2.4k
views
RNA Seq: Differential expression model formula
RNA-Seq R DESeq edgeR
updated 5.6 years ago by 20 • written 9.4 years ago by ★ 1.7k
5
votes
3
replies
6.1k
views
RNA velocity plot demystified
rna-velocity velocyto single-cell
updated 5.7 years ago by ▴ 30 • written 5.8 years ago by ★ 1.7k
0
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0
replies
6.1k
views
Comment: C: RNA velocity plot demystified
5.8 years ago by firestar ★ 1.7k
0
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1
reply
7.2k
views
Moving data from Seurat to ScanPy
seurat scanpy single-cell R python
updated 5.8 years ago by ▴ 230 • written 5.8 years ago by ★ 1.7k
0
votes
0
replies
6.3k
views
Answer: A: how to create a minimun spanning tree with R
updated 6.0 years ago by 45k • written 10.0 years ago by ★ 1.7k
2
votes
3
replies
2.1k
views
Downstream applications of Differential transcript expression
RNA-Seq
updated 6.0 years ago by 20 • written 8.3 years ago by ★ 1.7k
4
votes
3
replies
8.8k
views
Loading PLINK files to Haploview
plink haploview SNP
updated 4.1 years ago by ▴ 50 • written 7.8 years ago by ★ 1.7k
0
votes
1
reply
2.5k
views
Variant calling pacbio bacteria
pacbio variant-calling bacteria sniffles pbsv
updated 6.1 years ago by ▴ 520 • written 6.3 years ago by ★ 1.7k
1
vote
1
reply
2.7k
views
Converting bax.h5 to CCS reads
pacbio
6.3 years ago by firestar ★ 1.7k
0
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1
reply
7.3k
views
Comment: C: Fixing batch effect with seurat integrate
6.3 years ago by firestar ★ 1.7k
1
vote
3
replies
7.3k
views
Fixing batch effect with seurat integrate
scrna.seq seurat single-cell
6.3 years ago by firestar ★ 1.7k
28
votes
30
replies
10k
views
6 follow
Similarity between two FASTA files
similarity distance
updated 6.4 years ago by 20 • written 7.3 years ago by ★ 1.7k
4
votes
0
replies
6.0k
views
Answer: C: UMAP interpretation in scRNA-seq analysis
6.5 years ago by firestar ★ 1.7k
0
votes
1
reply
2.5k
views
Applications of TPM normalisation
RNA-Seq deseq2 normalisation dge
6.5 years ago by firestar ★ 1.7k
0
votes
0
replies
1.6k
views
Model selection for differential expression
RNA-Seq methylation limma differential expression
6.6 years ago by firestar ★ 1.7k
0
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0
replies
5.0k
views
Answer: A: M Value from Non-Normalized Methylated and Unmethylated Signal 450k
6.7 years ago by firestar ★ 1.7k
0
votes
0
replies
25k
views
Comment: C: bwa mem: Passing a variable to read group
6.7 years ago by firestar ★ 1.7k
7
votes
2
replies
4.2k
views
Multiple sequence alignment and visualisation for bacterial genomes
bacteria alignment MSA sequencing genome
6.7 years ago by firestar ★ 1.7k
0
votes
0
replies
11k
views
Comment: C: Command line tool for translated multifasta nucleotide to aminoacid sequence
6.7 years ago by firestar ★ 1.7k
4
votes
5
replies
5.0k
views
Median coverage from BAM file
coverage DNA-Seq
6.7 years ago by firestar ★ 1.7k
2
votes
0
replies
3.6k
views
Answer: A: PacBio merge runs
6.9 years ago by firestar ★ 1.7k
4
votes
1
reply
3.6k
views
PacBio merge runs
pacbio assembly
6.9 years ago by firestar ★ 1.7k
0
votes
1
reply
1.7k
views
Comment: C: Fasta length does not match Ensembl info
6.9 years ago by firestar ★ 1.7k
0
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0
replies
4.0k
views
Comment: C: Arrow Assembly polishing Error "KeyError: 'BASECALLERVERSION'"
6.9 years ago by firestar ★ 1.7k
1
vote
0
replies
31k
views
Comment: C: LD-decay in a r2 vs distance(cm) plot
7.0 years ago by firestar ★ 1.7k
32
votes
4
replies
10k
views
Tutorial: Fast LD computation from VCF files using tomahawk
ld snp vcf vcftools bcftools
updated 2.6 years ago by 45k • written 7.0 years ago by ★ 1.7k
1
vote
0
replies
31k
views
Comment: C: LD-decay in a r2 vs distance(cm) plot
7.0 years ago by firestar ★ 1.7k
0
votes
0
replies
1.7k
views
Comment: C: Fasta length does not match Ensembl info
7.1 years ago by firestar ★ 1.7k
1
vote
5
replies
1.7k
views
Fasta length does not match Ensembl info
annotation fasta
updated 7.1 years ago by 11k • written 7.1 years ago by ★ 1.7k
0
votes
0
replies
25k
views
Comment: C: bwa mem: Passing a variable to read group
7.1 years ago by firestar ★ 1.7k
0
votes
1
reply
1.7k
views
Mauve export similarity
multiple-sequence-alignment mauve
updated 2.5 years ago by 45k • written 7.3 years ago by ★ 1.7k
0
votes
0
replies
10k
views
Comment: C: Data for drawing Heatmaps (RNA-seq)
7.1 years ago by firestar ★ 1.7k
3
votes
1
reply
2.1k
views
Removing reads from fastq file based on position
RNA-Seq next-gen-sequencing
updated 3.3 years ago by 45k • written 9.7 years ago by ★ 1.7k
9
votes
1
reply
46k
views
Comment: C: Raw counts to TPM in R
updated 7.2 years ago by 45k • written 7.2 years ago by ★ 1.7k
34
votes
4
replies
46k
views
Raw counts to TPM in R
RNA-Seq R
updated 16 months ago by 90k • written 7.2 years ago by ★ 1.7k
1
vote
1
reply
10k
views
Comment: C: Similarity between two FASTA files
7.3 years ago by firestar ★ 1.7k
0
votes
1
reply
10k
views
Comment: C: Similarity between two FASTA files
7.3 years ago by firestar ★ 1.7k
0
votes
1
reply
10k
views
Comment: C: Similarity between two FASTA files
7.3 years ago by firestar ★ 1.7k
3
votes
2
replies
10k
views
Answer: A: Similarity between two FASTA files
7.3 years ago by firestar ★ 1.7k
193 results • Page 2 of 4
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