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1
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0
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114k
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Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 5.4 years ago by 45k • written 13.5 years ago by ★ 2.9k
7
votes
7
replies
4.4k
views
6 follow
Commercial Ngs Analysis Suites - Rate Them
next-gen sequencing analysis software
written 14.1 years ago by ★ 2.9k
0
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0
replies
6.2k
views
Comment: C: Has Anyone Heard Of Noiseq? A New Method For Differential Expression Analysis.
updated 6.1 years ago by 45k • written 14.3 years ago by ★ 2.9k
0
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5
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5.2k
views
Answer: A: Benchmarking Read Alignment And Variant-Calling Algorithms (For Dummies)
updated 6.1 years ago by 45k • written 14.2 years ago by ★ 2.9k
0
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7
replies
3.0k
views
Tophat2/Bowtie failing to align some examples of partial intron retention / exon loss
RNA-Seq alignment
updated 6.8 years ago by 8.3k • written 6.8 years ago by ★ 2.9k
0
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1
reply
3.0k
views
Answer: A: Tophat2/Bowtie failing to align some examples of partial intron retention / exon
6.8 years ago by Travis ★ 2.9k
0
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1
reply
3.0k
views
Comment: C: Tophat2/Bowtie failing to align some examples of partial intron retention / exon
6.8 years ago by Travis ★ 2.9k
0
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0
replies
3.0k
views
Comment: C: Tophat2/Bowtie failing to align some examples of partial intron retention / exon
6.8 years ago by Travis ★ 2.9k
17
votes
12
replies
6.0k
views
7 follow
Has Anyone Tried Rum For Aligning/Counting Illumina Rna-Seq Data?
rna alignment
updated 7.4 years ago by 20 • written 14.3 years ago by ★ 2.9k
61
votes
27
replies
31k
views
18 follow
Links To Good Next Gen Sequence Analysis Training Courses And Centres
next-gen sequencing analysis workshops training
updated 3.6 years ago by 45k • written 14.2 years ago by ★ 2.9k
3
votes
14
replies
8.2k
views
Problems With Bioconductor'S Genomicfeatures Package
r bioconductor next-gen sequencing rna
updated 9.1 years ago by ▴ 460 • written 14.2 years ago by ★ 2.9k
11
votes
5
replies
5.4k
views
Genomic Alignment And Snp/Indel Calling - My First Ever "Pipeline"
snp indel next-gen sequencing
updated 9.7 years ago by 20 • written 14.4 years ago by ★ 2.9k
4
votes
8
replies
5.1k
views
Bwa Aln For Snp/Indel Discovery With Paired End 100Bp Human Dna Reads
bwa dna next-gen sequencing snp indel
updated 9.7 years ago by 20 • written 14.4 years ago by ★ 2.9k
1
vote
4
replies
4.9k
views
Vcf Files With (Simulated) Phenotypes For Association Studies
association vcf next-gen sequencing simulation
updated 9.9 years ago by 20 • written 13.7 years ago by ★ 2.9k
6
votes
21
replies
9.4k
views
Problem Installing Bioconductor "Goseq" Package
bioconductor rna next-gen sequencing r
updated 3.3 years ago by 45k • written 14.0 years ago by ★ 2.9k
3
votes
1
reply
3.2k
views
Good Resource To Learn About 'Smaller' De Novo Eukaryotic Genome Assembly
next-gen sequencing denovo assembly genome
updated 10.6 years ago by 20 • written 13.7 years ago by ★ 2.9k
100
votes
12
replies
40k
views
14 follow
Best Software For Detection Of Somatic Mutations From Matched Tumor:Normal Ngs Data
somatic-mutation variant-calling SNV
updated 4.1 years ago by 45k • written 13.6 years ago by ★ 2.9k
3
votes
6
replies
4.1k
views
Srma (Short Read Micro-Aligner) Optimising For Speed
short alignment snp next-gen sequencing
updated 11.3 years ago by 20 • written 14.4 years ago by ★ 2.9k
0
votes
4
replies
4.5k
views
Rna-Seq And Multivariate Classifiers
next-gen sequencing classification rna
updated 11.5 years ago by 20 • written 14.2 years ago by ★ 2.9k
4
votes
1
reply
31k
views
Answer: A: How To Identify Targets Of A Transcription Factor ?
11.9 years ago by Travis ★ 2.9k
0
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1
reply
4.2k
views
Comment: C: Comparing Rpkms For One Test Sample Vs Multiple Controls
12.0 years ago by Travis ★ 2.9k
0
votes
3
replies
4.2k
views
Comparing Rpkms For One Test Sample Vs Multiple Controls
rna-seq differential-expression next-gen
updated 12.0 years ago by ▴ 280 • written 12.0 years ago by ★ 2.9k
18
votes
8
replies
12k
views
7 follow
Introducing Known Mutations (From A Vcf) Into A Fasta File
mutation vcf fasta next-gen sequencing
updated 12.4 years ago by 12k • written 13.7 years ago by ★ 2.9k
14
votes
10
replies
5.6k
views
Using Simngs To Generate Reads
next-gen sequencing read simulation illumina
updated 12.5 years ago by ▴ 140 • written 14.4 years ago by ★ 2.9k
4
votes
4
replies
4.3k
views
Illumina Ngs Test Data For Snp/Indel Calling And Association Study
next-gen sequencing snp association
updated 12.5 years ago by ▴ 60 • written 14.4 years ago by ★ 2.9k
8
votes
0
replies
76k
views
Answer: A: Database Of Tumor Suppressors And/Or Oncogenes
12.8 years ago by Travis ★ 2.9k
0
votes
0
replies
4.8k
views
Comment: C: Database Of Human Structural Variants Enabling Vcf File Creation
13.3 years ago by Travis ★ 2.9k
2
votes
3
replies
4.8k
views
Database Of Human Structural Variants Enabling Vcf File Creation
next-gen vcf sv
updated 13.3 years ago by ★ 1.1k • written 13.3 years ago by ★ 2.9k
0
votes
0
replies
15k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
13.5 years ago by Travis ★ 2.9k
0
votes
0
replies
15k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
13.5 years ago by Travis ★ 2.9k
0
votes
2
replies
15k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
13.5 years ago by Travis ★ 2.9k
0
votes
2
replies
15k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
13.5 years ago by Travis ★ 2.9k
0
votes
1
reply
15k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
13.5 years ago by Travis ★ 2.9k
0
votes
0
replies
15k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
13.5 years ago by Travis ★ 2.9k
26
votes
30
replies
15k
views
9 follow
Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
perl python
updated 13.5 years ago by ▴ 900 • written 13.5 years ago by ★ 2.9k
0
votes
1
reply
15k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
13.5 years ago by Travis ★ 2.9k
0
votes
0
replies
3.8k
views
Comment: C: Gatk Snp Calling Test Set
13.5 years ago by Travis ★ 2.9k
11
votes
3
replies
5.3k
views
Filtering Ngs Genomic Alignments
next-gen sequencing alignment filter paired
updated 13.7 years ago by ★ 1.2k • written 14.5 years ago by ★ 2.9k
3
votes
10
replies
6.9k
views
Large Deletions With Bwa And Single End Reads
indel next-gen sequencing alignment bwa
updated 13.7 years ago by ★ 4.3k • written 13.9 years ago by ★ 2.9k
12
votes
4
replies
3.7k
views
Does Anyone Know Of A Publication Reviewing Snp/Indel Finding Algorithms For Ngs Data?
next-gen sequencing snp indel publication
updated 13.7 years ago by ▴ 770 • written 14.3 years ago by ★ 2.9k
2
votes
5
replies
3.8k
views
Software To Simulate Solid Colorspace Reads
simulation next-gen sequencing solid
updated 13.7 years ago by ▴ 920 • written 14.3 years ago by ★ 2.9k
2
votes
8
replies
6.1k
views
Confused By Wgsim Output
next-gen sequencing short samtools
13.7 years ago by Travis ★ 2.9k
7
votes
6
replies
3.7k
views
Read Generator With Clear Annotation Of Read Origin And Mutations
short next-gen sequencing simulation alignment
updated 13.7 years ago by 166k • written 14.2 years ago by ★ 2.9k
3
votes
0
replies
33k
views
Answer: A: Human Exome Capture Library Coordinates Download
13.7 years ago by Travis ★ 2.9k
0
votes
0
replies
12k
views
Comment: C: Introducing Known Mutations (From A Vcf) Into A Fasta File
13.7 years ago by Travis ★ 2.9k
0
votes
0
replies
12k
views
Comment: C: Introducing Known Mutations (From A Vcf) Into A Fasta File
13.7 years ago by Travis ★ 2.9k
1
vote
0
replies
4.9k
views
Comment: C: Vcf Files With (Simulated) Phenotypes For Association Studies
13.7 years ago by Travis ★ 2.9k
0
votes
0
replies
4.9k
views
Comment: C: Vcf Files With (Simulated) Phenotypes For Association Studies
13.7 years ago by Travis ★ 2.9k
153
votes
32
replies
12k
views
23 follow
Picking A Programming Language And Where To Begin
programming next-gen sequencing c subjective
updated 13.7 years ago by ▴ 60 • written 14.2 years ago by ★ 2.9k
0
votes
0
replies
3.0k
views
Comment: C: Using Bfast To Align Illumina Paired End Reads
13.8 years ago by Travis ★ 2.9k
244 results • Page 1 of 5
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