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1
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0
replies
64k
views
Comment:
C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.4 years ago by
Ram
44k • written 12.5 years ago by
Travis
★ 2.8k
7
votes
7
replies
3.7k
views
6 follow
Commercial Ngs Analysis Suites - Rate Them
next-gen
sequencing
analysis
software
written 13.0 years ago by
Travis
★ 2.8k
0
votes
0
replies
5.5k
views
Comment:
C: Has Anyone Heard Of Noiseq? A New Method For Differential Expression Analysis.
updated 5.0 years ago by
Ram
44k • written 13.2 years ago by
Travis
★ 2.8k
0
votes
5
replies
4.5k
views
Answer:
A: Benchmarking Read Alignment And Variant-Calling Algorithms (For Dummies)
updated 5.1 years ago by
Ram
44k • written 13.2 years ago by
Travis
★ 2.8k
0
votes
7
replies
2.1k
views
Tophat2/Bowtie failing to align some examples of partial intron retention / exon loss
RNA-Seq
alignment
updated 5.8 years ago by
Charles Warden
8.3k • written 5.8 years ago by
Travis
★ 2.8k
0
votes
1
reply
2.1k
views
Answer:
A: Tophat2/Bowtie failing to align some examples of partial intron retention / exon
5.8 years ago by
Travis
★ 2.8k
0
votes
1
reply
2.1k
views
Comment:
C: Tophat2/Bowtie failing to align some examples of partial intron retention / exon
5.8 years ago by
Travis
★ 2.8k
0
votes
0
replies
2.1k
views
Comment:
C: Tophat2/Bowtie failing to align some examples of partial intron retention / exon
5.8 years ago by
Travis
★ 2.8k
17
votes
12
replies
5.0k
views
7 follow
Has Anyone Tried Rum For Aligning/Counting Illumina Rna-Seq Data?
rna
alignment
updated 6.3 years ago by
Biostar
20 • written 13.2 years ago by
Travis
★ 2.8k
61
votes
27
replies
28k
views
18 follow
Links To Good Next Gen Sequence Analysis Training Courses And Centres
next-gen
sequencing
analysis
workshops
training
updated 2.5 years ago by
Ram
44k • written 13.2 years ago by
Travis
★ 2.8k
3
votes
14
replies
6.8k
views
Problems With Bioconductor'S Genomicfeatures Package
r
bioconductor
next-gen
sequencing
rna
updated 8.0 years ago by
Stephane Plaisance
▴ 460 • written 13.1 years ago by
Travis
★ 2.8k
11
votes
5
replies
4.8k
views
Genomic Alignment And Snp/Indel Calling - My First Ever "Pipeline"
snp
indel
next-gen
sequencing
updated 8.7 years ago by
Biostar
20 • written 13.4 years ago by
Travis
★ 2.8k
4
votes
8
replies
4.2k
views
Bwa Aln For Snp/Indel Discovery With Paired End 100Bp Human Dna Reads
bwa
dna
next-gen
sequencing
snp
indel
updated 8.7 years ago by
Biostar
20 • written 13.4 years ago by
Travis
★ 2.8k
1
vote
4
replies
4.2k
views
Vcf Files With (Simulated) Phenotypes For Association Studies
association
vcf
next-gen
sequencing
simulation
updated 8.8 years ago by
Biostar
20 • written 12.6 years ago by
Travis
★ 2.8k
6
votes
21
replies
7.7k
views
Problem Installing Bioconductor "Goseq" Package
bioconductor
rna
next-gen
sequencing
r
updated 2.3 years ago by
Ram
44k • written 12.9 years ago by
Travis
★ 2.8k
3
votes
1
reply
2.9k
views
Good Resource To Learn About 'Smaller' De Novo Eukaryotic Genome Assembly
next-gen
sequencing
denovo
assembly
genome
updated 9.6 years ago by
Biostar
20 • written 12.7 years ago by
Travis
★ 2.8k
100
votes
12
replies
38k
views
14 follow
Best Software For Detection Of Somatic Mutations From Matched Tumor:Normal Ngs Data
somatic-mutation
variant-calling
SNV
updated 3.0 years ago by
Ram
44k • written 12.5 years ago by
Travis
★ 2.8k
3
votes
6
replies
3.4k
views
Srma (Short Read Micro-Aligner) Optimising For Speed
short
alignment
snp
next-gen
sequencing
updated 10.3 years ago by
Biostar
20 • written 13.3 years ago by
Travis
★ 2.8k
0
votes
4
replies
3.9k
views
Rna-Seq And Multivariate Classifiers
next-gen
sequencing
classification
rna
updated 10.5 years ago by
Biostar
20 • written 13.1 years ago by
Travis
★ 2.8k
4
votes
1
reply
29k
views
Answer:
A: How To Identify Targets Of A Transcription Factor ?
10.9 years ago by
Travis
★ 2.8k
0
votes
1
reply
3.7k
views
Comment:
C: Comparing Rpkms For One Test Sample Vs Multiple Controls
10.9 years ago by
Travis
★ 2.8k
0
votes
3
replies
3.7k
views
Comparing Rpkms For One Test Sample Vs Multiple Controls
rna-seq
differential-expression
next-gen
updated 10.9 years ago by
Hayssam
▴ 280 • written 10.9 years ago by
Travis
★ 2.8k
18
votes
8
replies
11k
views
7 follow
Introducing Known Mutations (From A Vcf) Into A Fasta File
mutation
vcf
fasta
next-gen
sequencing
updated 11.3 years ago by
Ashutosh Pandey
12k • written 12.6 years ago by
Travis
★ 2.8k
14
votes
10
replies
4.7k
views
Using Simngs To Generate Reads
next-gen
sequencing
read
simulation
illumina
updated 11.4 years ago by
guillemch
▴ 140 • written 13.4 years ago by
Travis
★ 2.8k
4
votes
4
replies
3.7k
views
Illumina Ngs Test Data For Snp/Indel Calling And Association Study
next-gen
sequencing
snp
association
updated 11.4 years ago by
marcodpc
▴ 60 • written 13.4 years ago by
Travis
★ 2.8k
8
votes
0
replies
72k
views
Answer:
A: Database Of Tumor Suppressors And/Or Oncogenes
11.7 years ago by
Travis
★ 2.8k
0
votes
0
replies
4.0k
views
Comment:
C: Database Of Human Structural Variants Enabling Vcf File Creation
12.2 years ago by
Travis
★ 2.8k
2
votes
3
replies
4.0k
views
Database Of Human Structural Variants Enabling Vcf File Creation
next-gen
vcf
sv
updated 12.2 years ago by
deanna.church
★ 1.1k • written 12.2 years ago by
Travis
★ 2.8k
0
votes
0
replies
13k
views
Comment:
C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.4 years ago by
Travis
★ 2.8k
0
votes
0
replies
13k
views
Comment:
C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.4 years ago by
Travis
★ 2.8k
0
votes
2
replies
13k
views
Comment:
C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.4 years ago by
Travis
★ 2.8k
0
votes
2
replies
13k
views
Comment:
C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.4 years ago by
Travis
★ 2.8k
0
votes
1
reply
13k
views
Comment:
C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.4 years ago by
Travis
★ 2.8k
0
votes
0
replies
13k
views
Comment:
C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.4 years ago by
Travis
★ 2.8k
26
votes
30
replies
13k
views
9 follow
Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
perl
python
updated 12.4 years ago by
Marvin
▴ 900 • written 12.4 years ago by
Travis
★ 2.8k
0
votes
1
reply
13k
views
Comment:
C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.4 years ago by
Travis
★ 2.8k
0
votes
0
replies
3.4k
views
Comment:
C: Gatk Snp Calling Test Set
12.5 years ago by
Travis
★ 2.8k
11
votes
3
replies
4.7k
views
Filtering Ngs Genomic Alignments
next-gen
sequencing
alignment
filter
paired
updated 12.6 years ago by
John St. John
★ 1.2k • written 13.4 years ago by
Travis
★ 2.8k
3
votes
10
replies
5.9k
views
Large Deletions With Bwa And Single End Reads
indel
next-gen
sequencing
alignment
bwa
updated 12.6 years ago by
Ying W
★ 4.3k • written 12.8 years ago by
Travis
★ 2.8k
12
votes
4
replies
3.1k
views
Does Anyone Know Of A Publication Reviewing Snp/Indel Finding Algorithms For Ngs Data?
next-gen
sequencing
snp
indel
publication
updated 12.6 years ago by
Thomas
▴ 760 • written 13.2 years ago by
Travis
★ 2.8k
2
votes
5
replies
3.2k
views
Software To Simulate Solid Colorspace Reads
simulation
next-gen
sequencing
solid
updated 12.6 years ago by
Drio
▴ 920 • written 13.2 years ago by
Travis
★ 2.8k
2
votes
8
replies
5.3k
views
Confused By Wgsim Output
next-gen
sequencing
short
samtools
12.6 years ago by
Travis
★ 2.8k
7
votes
6
replies
3.1k
views
Read Generator With Clear Annotation Of Read Origin And Mutations
short
next-gen
sequencing
simulation
alignment
updated 12.6 years ago by
Pierre Lindenbaum
164k • written 13.2 years ago by
Travis
★ 2.8k
3
votes
0
replies
31k
views
Answer:
A: Human Exome Capture Library Coordinates Download
12.6 years ago by
Travis
★ 2.8k
0
votes
0
replies
11k
views
Comment:
C: Introducing Known Mutations (From A Vcf) Into A Fasta File
12.6 years ago by
Travis
★ 2.8k
0
votes
0
replies
11k
views
Comment:
C: Introducing Known Mutations (From A Vcf) Into A Fasta File
12.6 years ago by
Travis
★ 2.8k
1
vote
0
replies
4.2k
views
Comment:
C: Vcf Files With (Simulated) Phenotypes For Association Studies
12.6 years ago by
Travis
★ 2.8k
0
votes
0
replies
4.2k
views
Comment:
C: Vcf Files With (Simulated) Phenotypes For Association Studies
12.6 years ago by
Travis
★ 2.8k
153
votes
32
replies
9.2k
views
23 follow
Picking A Programming Language And Where To Begin
programming
next-gen
sequencing
c
subjective
updated 12.7 years ago by
Palani Kannan
▴ 60 • written 13.2 years ago by
Travis
★ 2.8k
0
votes
0
replies
2.6k
views
Comment:
C: Using Bfast To Align Illumina Paired End Reads
12.8 years ago by
Travis
★ 2.8k
244 results • Page
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