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811
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Comment: C: Best aligner to identify single point mutation
3.4 years ago by silas008 ▴ 160
6
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7
replies
811
views
Best aligner to identify single point mutation
RNA-Seq
3.4 years ago by silas008 ▴ 160
9
votes
9
replies
3.4k
views
glmQLFTest coef for multiple comparisons
edgeR RNA-Seq
updated 3.5 years ago by ★ 7.0k • written 3.5 years ago by ▴ 160
0
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0
replies
3.4k
views
Comment: C: glmQLFTest coef for multiple comparisons
3.5 years ago by silas008 ▴ 160
0
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1
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3.4k
views
Comment: C: glmQLFTest coef for multiple comparisons
3.5 years ago by silas008 ▴ 160
0
votes
1
reply
3.4k
views
Comment: C: glmQLFTest coef for multiple comparisons
3.5 years ago by silas008 ▴ 160
0
votes
1
reply
3.4k
views
Comment: C: glmQLFTest coef for multiple comparisons
3.5 years ago by silas008 ▴ 160
0
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0
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4.2k
views
Comment: C: EdgeR analysis with CPM normalzed counts
3.6 years ago by silas008 ▴ 160
5
votes
7
replies
4.2k
views
EdgeR analysis with CPM normalzed counts
RNA-Seq
updated 3.6 years ago by 81k • written 3.6 years ago by ▴ 160
0
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0
replies
4.2k
views
Comment: C: EdgeR analysis with CPM normalzed counts
3.6 years ago by silas008 ▴ 160
0
votes
2
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4.2k
views
Comment: C: EdgeR analysis with CPM normalzed counts
3.6 years ago by silas008 ▴ 160
2
votes
1
reply
1.1k
views
EdgeR matrix design and comparisons for paired samples
RNA-Seq edgeR
updated 3.7 years ago by 35k • written 3.7 years ago by ▴ 160
1
vote
2
replies
4.3k
views
STAR error: EXITING because of FATAL ERROR in reads input: short read sequence line: 0
RNA-Seq
updated 3.7 years ago by • 0 • written 4.1 years ago by ▴ 160
0
votes
0
replies
40k
views
Comment: C: LogFC and LogCPM
4.2 years ago by silas008 ▴ 160
0
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0
replies
875
views
Comment: C: How to caracterize single point mutation (or editing) in RNAseq?
4.2 years ago by silas008 ▴ 160
1
vote
2
replies
875
views
How to caracterize single point mutation (or editing) in RNAseq?
RNAseq GATK
4.2 years ago by silas008 ▴ 160
0
votes
0
replies
2.8k
views
Comment: C: GEO (NCBI) confusing data
updated 4.3 years ago by 43k • written 8.2 years ago by ▴ 160
0
votes
0
replies
2.1k
views
Comment: C: How to add the gene names on wormbase_genes BED file?
updated 4.3 years ago by 43k • written 8.2 years ago by ▴ 160
0
votes
0
replies
3.3k
views
Comment: C: Problem with Fastqc quality control for miRNAseq data
updated 4.5 years ago by 43k • written 8.8 years ago by ▴ 160
3
votes
3
replies
1.1k
views
Is there some good software to align/compare fasta sequences in my PC
fasta comparison
updated 4.8 years ago by ▴ 460 • written 4.8 years ago by ▴ 160
1
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1
reply
10.0k
views
Comment: C: How to perform multiple comparisons using edgeR?
4.9 years ago by silas008 ▴ 160
1
vote
1
reply
10.0k
views
Comment: C: How to perform multiple comparisons using edgeR?
4.9 years ago by silas008 ▴ 160
0
votes
0
replies
10.0k
views
Comment: C: How to perform multiple comparisons using edgeR?
4.9 years ago by silas008 ▴ 160
0
votes
1
reply
10.0k
views
Comment: C: How to perform multiple comparisons using edgeR?
4.9 years ago by silas008 ▴ 160
0
votes
1
reply
10.0k
views
Comment: C: How to perform multiple comparisons using edgeR?
4.9 years ago by silas008 ▴ 160
0
votes
0
replies
10.0k
views
Comment: A: How to perform multiple comparisons using edgeR?
4.9 years ago by silas008 ▴ 160
8
votes
15
replies
10.0k
views
How to perform multiple comparisons using edgeR?
RNA-Seq edgeR
updated 14 months ago by • 0 • written 4.9 years ago by ▴ 160
0
votes
1
reply
10.0k
views
Comment: C: How to perform multiple comparisons using edgeR?
4.9 years ago by silas008 ▴ 160
1
vote
1
reply
16k
views
Comment: C: How to use edgeR to compare multiple conditions to reference condtiion
4.9 years ago by silas008 ▴ 160
1
vote
0
replies
977
views
What type of GTF file should I use for miRNAseq analysis?
RNA-Seq miRNA edgeR
4.9 years ago by silas008 ▴ 160
0
votes
0
replies
2.9k
views
Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
4.9 years ago by silas008 ▴ 160
0
votes
0
replies
2.9k
views
Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
4.9 years ago by silas008 ▴ 160
1
vote
2
replies
2.1k
views
How to add the gene names on wormbase_genes BED file?
genes wormbase
updated 21 months ago by 43k • written 8.2 years ago by ▴ 160
2
votes
1
reply
2.1k
views
edgeR analysis outputs FDR equals 1
RNA-Seq edgeR FDR
updated 4.9 years ago by 14k • written 4.9 years ago by ▴ 160
5
votes
10
replies
2.9k
views
Should I keep all HTSeq table informations for edgeR analysis?
htseq edgeR RNAseq
updated 4.9 years ago by ★ 2.2k • written 4.9 years ago by ▴ 160
0
votes
2
replies
2.9k
views
Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
4.9 years ago by silas008 ▴ 160
4
votes
8
replies
2.2k
views
Bowtie2 mapped just 50% of the reads
RNA-Seq
updated 5.2 years ago by 20 • written 5.3 years ago by ▴ 160
0
votes
0
replies
2.2k
views
Comment: C: Bowtie2 mapped just 50% of the reads
5.3 years ago by silas008 ▴ 160
0
votes
0
replies
2.2k
views
Comment: C: Bowtie2 mapped just 50% of the reads
5.3 years ago by silas008 ▴ 160
0
votes
1
reply
2.2k
views
Comment: C: Bowtie2 mapped just 50% of the reads
5.3 years ago by silas008 ▴ 160
2
votes
8
replies
2.2k
views
Problem with bad quality bases in RNAseq
RNA-seq
updated 17 months ago by 43k • written 8.7 years ago by ▴ 160
0
votes
2
replies
6.0k
views
GFF3 to GTF
gff gtf
updated 5.6 years ago by 43k • written 8.2 years ago by ▴ 160
16
votes
8
replies
40k
views
7 follow
LogFC and LogCPM
rna-seq
updated 2.8 years ago by ▴ 250 • written 6.9 years ago by ▴ 160
0
votes
0
replies
4.5k
views
Comment: C: How to extract reads from bam file?
5.7 years ago by silas008 ▴ 160
0
votes
0
replies
4.5k
views
Comment: C: How to extract reads from bam file?
5.7 years ago by silas008 ▴ 160
0
votes
0
replies
4.5k
views
Comment: C: How to extract reads from bam file?
5.7 years ago by silas008 ▴ 160
0
votes
1
reply
4.5k
views
Comment: C: How to extract reads from bam file?
5.7 years ago by silas008 ▴ 160
3
votes
8
replies
4.5k
views
How to extract reads from bam file?
RNA-Seq alignment
updated 5.7 years ago by 43k • written 5.7 years ago by ▴ 160
0
votes
0
replies
53k
views
Comment: C: PCA plot from read count matrix from RNA-Seq
5.7 years ago by silas008 ▴ 160
0
votes
1
reply
2.2k
views
Comment: C: Can I use absolut numbers (not log values) to make a Heatmap?
5.7 years ago by silas008 ▴ 160
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