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Comment: C: Best aligner to identify single point mutation
4.6 years ago by silas008 ▴ 180
6
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7
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1.2k
views
Best aligner to identify single point mutation
RNA-Seq
4.6 years ago by silas008 ▴ 180
10
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9
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4.8k
views
glmQLFTest coef for multiple comparisons
edgeR RNA-Seq
updated 4.6 years ago by ★ 8.2k • written 4.6 years ago by ▴ 180
0
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0
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4.8k
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Comment: C: glmQLFTest coef for multiple comparisons
4.6 years ago by silas008 ▴ 180
0
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1
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4.8k
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Comment: C: glmQLFTest coef for multiple comparisons
4.6 years ago by silas008 ▴ 180
0
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1
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4.8k
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Comment: C: glmQLFTest coef for multiple comparisons
4.6 years ago by silas008 ▴ 180
0
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1
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4.8k
views
Comment: C: glmQLFTest coef for multiple comparisons
4.6 years ago by silas008 ▴ 180
0
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0
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6.5k
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Comment: C: EdgeR analysis with CPM normalzed counts
4.7 years ago by silas008 ▴ 180
6
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7
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6.5k
views
EdgeR analysis with CPM normalzed counts
RNA-Seq
updated 4.7 years ago by 88k • written 4.7 years ago by ▴ 180
0
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0
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6.5k
views
Comment: C: EdgeR analysis with CPM normalzed counts
4.7 years ago by silas008 ▴ 180
0
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2
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6.5k
views
Comment: C: EdgeR analysis with CPM normalzed counts
4.7 years ago by silas008 ▴ 180
2
votes
1
reply
1.5k
views
EdgeR matrix design and comparisons for paired samples
RNA-Seq edgeR
updated 4.9 years ago by 35k • written 4.9 years ago by ▴ 180
1
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2
replies
5.1k
views
STAR error: EXITING because of FATAL ERROR in reads input: short read sequence line: 0
RNA-Seq
updated 4.9 years ago by • 0 • written 5.3 years ago by ▴ 180
0
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0
replies
46k
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Comment: C: LogFC and LogCPM
5.3 years ago by silas008 ▴ 180
0
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0
replies
1.1k
views
Comment: C: How to caracterize single point mutation (or editing) in RNAseq?
5.3 years ago by silas008 ▴ 180
1
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2
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1.1k
views
How to caracterize single point mutation (or editing) in RNAseq?
RNAseq GATK
5.3 years ago by silas008 ▴ 180
0
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0
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3.3k
views
Comment: C: GEO (NCBI) confusing data
updated 5.5 years ago by 45k • written 9.4 years ago by ▴ 180
0
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0
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2.4k
views
Comment: C: How to add the gene names on wormbase_genes BED file?
updated 5.5 years ago by 45k • written 9.4 years ago by ▴ 180
0
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0
replies
3.9k
views
Comment: C: Problem with Fastqc quality control for miRNAseq data
updated 5.6 years ago by 45k • written 9.9 years ago by ▴ 180
3
votes
3
replies
1.7k
views
Is there some good software to align/compare fasta sequences in my PC
fasta comparison
updated 5.9 years ago by ▴ 460 • written 5.9 years ago by ▴ 180
1
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1
reply
13k
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Comment: C: How to perform multiple comparisons using edgeR?
6.0 years ago by silas008 ▴ 180
1
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1
reply
13k
views
Comment: C: How to perform multiple comparisons using edgeR?
6.0 years ago by silas008 ▴ 180
0
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0
replies
13k
views
Comment: C: How to perform multiple comparisons using edgeR?
6.0 years ago by silas008 ▴ 180
0
votes
1
reply
13k
views
Comment: C: How to perform multiple comparisons using edgeR?
6.0 years ago by silas008 ▴ 180
0
votes
1
reply
13k
views
Comment: C: How to perform multiple comparisons using edgeR?
6.0 years ago by silas008 ▴ 180
0
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0
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13k
views
Comment: A: How to perform multiple comparisons using edgeR?
6.0 years ago by silas008 ▴ 180
8
votes
15
replies
13k
views
How to perform multiple comparisons using edgeR?
RNA-Seq edgeR
updated 2.4 years ago by • 0 • written 6.1 years ago by ▴ 180
0
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1
reply
13k
views
Comment: C: How to perform multiple comparisons using edgeR?
6.0 years ago by silas008 ▴ 180
1
vote
1
reply
17k
views
Comment: C: How to use edgeR to compare multiple conditions to reference condtiion
6.1 years ago by silas008 ▴ 180
1
vote
0
replies
1.1k
views
What type of GTF file should I use for miRNAseq analysis?
RNA-Seq miRNA edgeR
6.1 years ago by silas008 ▴ 180
0
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0
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3.5k
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Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
6.1 years ago by silas008 ▴ 180
0
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0
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3.5k
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Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
6.1 years ago by silas008 ▴ 180
1
vote
2
replies
2.4k
views
How to add the gene names on wormbase_genes BED file?
genes wormbase
updated 2.9 years ago by 45k • written 9.4 years ago by ▴ 180
2
votes
1
reply
2.4k
views
edgeR analysis outputs FDR equals 1
RNA-Seq edgeR FDR
updated 6.1 years ago by 15k • written 6.1 years ago by ▴ 180
5
votes
10
replies
3.5k
views
Should I keep all HTSeq table informations for edgeR analysis?
htseq edgeR RNAseq
updated 6.1 years ago by ★ 2.2k • written 6.1 years ago by ▴ 180
0
votes
2
replies
3.5k
views
Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
6.1 years ago by silas008 ▴ 180
4
votes
8
replies
3.1k
views
Bowtie2 mapped just 50% of the reads
RNA-Seq
updated 6.4 years ago by 20 • written 6.4 years ago by ▴ 180
0
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0
replies
3.1k
views
Comment: C: Bowtie2 mapped just 50% of the reads
6.4 years ago by silas008 ▴ 180
0
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0
replies
3.1k
views
Comment: C: Bowtie2 mapped just 50% of the reads
6.4 years ago by silas008 ▴ 180
0
votes
1
reply
3.1k
views
Comment: C: Bowtie2 mapped just 50% of the reads
6.4 years ago by silas008 ▴ 180
2
votes
8
replies
2.6k
views
Problem with bad quality bases in RNAseq
RNA-seq
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 180
0
votes
2
replies
6.3k
views
GFF3 to GTF
gff gtf
updated 6.8 years ago by 45k • written 9.3 years ago by ▴ 180
17
votes
8
replies
46k
views
7 follow
LogFC and LogCPM
rna-seq
updated 4.0 years ago by ▴ 260 • written 8.1 years ago by ▴ 180
0
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0
replies
5.3k
views
Comment: C: How to extract reads from bam file?
6.9 years ago by silas008 ▴ 180
0
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0
replies
5.3k
views
Comment: C: How to extract reads from bam file?
6.9 years ago by silas008 ▴ 180
0
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0
replies
5.3k
views
Comment: C: How to extract reads from bam file?
6.9 years ago by silas008 ▴ 180
0
votes
1
reply
5.3k
views
Comment: C: How to extract reads from bam file?
6.9 years ago by silas008 ▴ 180
3
votes
8
replies
5.3k
views
How to extract reads from bam file?
RNA-Seq alignment
updated 6.9 years ago by 45k • written 6.9 years ago by ▴ 180
0
votes
0
replies
60k
views
Comment: C: PCA plot from read count matrix from RNA-Seq
6.9 years ago by silas008 ▴ 180
0
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1
reply
2.9k
views
Comment: C: Can I use absolut numbers (not log values) to make a Heatmap?
6.9 years ago by silas008 ▴ 180
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