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Comment: C: Best aligner to identify single point mutation
2.1 years ago by silas008 ▴ 150
6
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7
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514
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Best aligner to identify single point mutation
RNA-Seq
2.1 years ago by silas008 ▴ 150
9
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9
replies
1.9k
views
glmQLFTest coef for multiple comparisons
edgeR RNA-Seq
updated 2.1 years ago by ★ 5.2k • written 2.1 years ago by ▴ 150
0
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0
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1.9k
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Comment: C: glmQLFTest coef for multiple comparisons
2.1 years ago by silas008 ▴ 150
0
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1
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1.9k
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Comment: C: glmQLFTest coef for multiple comparisons
2.1 years ago by silas008 ▴ 150
0
votes
1
reply
1.9k
views
Comment: C: glmQLFTest coef for multiple comparisons
2.1 years ago by silas008 ▴ 150
0
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1
reply
1.9k
views
Comment: C: glmQLFTest coef for multiple comparisons
2.1 years ago by silas008 ▴ 150
0
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0
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2.3k
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Comment: C: EdgeR analysis with CPM normalzed counts
2.2 years ago by silas008 ▴ 150
5
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7
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2.3k
views
EdgeR analysis with CPM normalzed counts
RNA-Seq
updated 2.2 years ago by 66k • written 2.2 years ago by ▴ 150
0
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0
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2.3k
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Comment: C: EdgeR analysis with CPM normalzed counts
2.2 years ago by silas008 ▴ 150
0
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2
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2.3k
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Comment: C: EdgeR analysis with CPM normalzed counts
2.2 years ago by silas008 ▴ 150
2
votes
1
reply
772
views
EdgeR matrix design and comparisons for paired samples
RNA-Seq edgeR
updated 2.3 years ago by 34k • written 2.3 years ago by ▴ 150
1
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2
replies
2.9k
views
STAR error: EXITING because of FATAL ERROR in reads input: short read sequence line: 0
RNA-Seq
updated 2.4 years ago by • 0 • written 2.7 years ago by ▴ 150
0
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0
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33k
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Comment: C: LogFC and LogCPM
2.8 years ago by silas008 ▴ 150
0
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0
replies
656
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Comment: C: How to caracterize single point mutation (or editing) in RNAseq?
2.8 years ago by silas008 ▴ 150
1
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2
replies
656
views
How to caracterize single point mutation (or editing) in RNAseq?
RNAseq GATK
2.8 years ago by silas008 ▴ 150
0
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0
replies
2.5k
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Comment: C: GEO (NCBI) confusing data
updated 2.9 years ago by 37k • written 6.9 years ago by ▴ 150
0
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0
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1.9k
views
Comment: C: How to add the gene names on wormbase_genes BED file?
updated 3.0 years ago by 37k • written 6.9 years ago by ▴ 150
0
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0
replies
2.9k
views
Comment: C: Problem with Fastqc quality control for miRNAseq data
updated 3.1 years ago by 37k • written 7.4 years ago by ▴ 150
3
votes
3
replies
737
views
Is there some good software to align/compare fasta sequences in my PC
fasta comparison
updated 3.4 years ago by ▴ 420 • written 3.4 years ago by ▴ 150
1
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1
reply
6.8k
views
Comment: C: How to perform multiple comparisons using edgeR?
3.5 years ago by silas008 ▴ 150
1
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1
reply
6.8k
views
Comment: C: How to perform multiple comparisons using edgeR?
3.5 years ago by silas008 ▴ 150
0
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0
replies
6.8k
views
Comment: C: How to perform multiple comparisons using edgeR?
3.5 years ago by silas008 ▴ 150
0
votes
1
reply
6.8k
views
Comment: C: How to perform multiple comparisons using edgeR?
3.5 years ago by silas008 ▴ 150
0
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1
reply
6.8k
views
Comment: C: How to perform multiple comparisons using edgeR?
3.5 years ago by silas008 ▴ 150
0
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0
replies
6.8k
views
Comment: A: How to perform multiple comparisons using edgeR?
3.5 years ago by silas008 ▴ 150
8
votes
14
replies
6.8k
views
How to perform multiple comparisons using edgeR?
RNA-Seq edgeR
3.5 years ago by silas008 ▴ 150
0
votes
1
reply
6.8k
views
Comment: C: How to perform multiple comparisons using edgeR?
3.5 years ago by silas008 ▴ 150
1
vote
1
reply
15k
views
Comment: C: How to use edgeR to compare multiple conditions to reference condtiion
3.5 years ago by silas008 ▴ 150
1
vote
0
replies
760
views
What type of GTF file should I use for miRNAseq analysis?
RNA-Seq miRNA edgeR
3.6 years ago by silas008 ▴ 150
0
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0
replies
2.1k
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Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
3.6 years ago by silas008 ▴ 150
0
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0
replies
2.1k
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Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
3.6 years ago by silas008 ▴ 150
1
vote
2
replies
1.9k
views
How to add the gene names on wormbase_genes BED file?
genes wormbase
updated 4 months ago by 37k • written 6.9 years ago by ▴ 150
2
votes
1
reply
1.7k
views
edgeR analysis outputs FDR equals 1
RNA-Seq edgeR FDR
updated 3.6 years ago by 12k • written 3.6 years ago by ▴ 150
5
votes
10
replies
2.1k
views
Should I keep all HTSeq table informations for edgeR analysis?
htseq edgeR RNAseq
updated 3.6 years ago by ★ 2.1k • written 3.6 years ago by ▴ 150
0
votes
2
replies
2.1k
views
Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
3.6 years ago by silas008 ▴ 150
4
votes
8
replies
1.5k
views
Bowtie2 mapped just 50% of the reads
RNA-Seq
updated 3.8 years ago by 20 • written 3.9 years ago by ▴ 150
0
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0
replies
1.5k
views
Comment: C: Bowtie2 mapped just 50% of the reads
3.9 years ago by silas008 ▴ 150
0
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0
replies
1.5k
views
Comment: C: Bowtie2 mapped just 50% of the reads
3.9 years ago by silas008 ▴ 150
0
votes
1
reply
1.5k
views
Comment: C: Bowtie2 mapped just 50% of the reads
3.9 years ago by silas008 ▴ 150
2
votes
8
replies
1.7k
views
Problem with bad quality bases in RNAseq
RNA-seq
updated 5 weeks ago by 37k • written 7.4 years ago by ▴ 150
0
votes
2
replies
5.5k
views
GFF3 to GTF
gff gtf
updated 4.2 years ago by 37k • written 6.8 years ago by ▴ 150
12
votes
8
replies
33k
views
7 follow
LogFC and LogCPM
rna-seq
updated 17 months ago by ▴ 170 • written 5.6 years ago by ▴ 150
0
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0
replies
3.3k
views
Comment: C: How to extract reads from bam file?
4.3 years ago by silas008 ▴ 150
0
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0
replies
3.3k
views
Comment: C: How to extract reads from bam file?
4.3 years ago by silas008 ▴ 150
0
votes
0
replies
3.3k
views
Comment: C: How to extract reads from bam file?
4.3 years ago by silas008 ▴ 150
0
votes
1
reply
3.3k
views
Comment: C: How to extract reads from bam file?
4.3 years ago by silas008 ▴ 150
3
votes
8
replies
3.3k
views
How to extract reads from bam file?
RNA-Seq alignment
updated 4.3 years ago by 37k • written 4.3 years ago by ▴ 150
0
votes
0
replies
43k
views
Comment: C: PCA plot from read count matrix from RNA-Seq
4.4 years ago by silas008 ▴ 150
0
votes
1
reply
1.7k
views
Comment: C: Can I use absolut numbers (not log values) to make a Heatmap?
4.4 years ago by silas008 ▴ 150
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