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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
16 months ago by Assa Yeroslaviz ★ 1.9k
0
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1
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2.8k
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
16 months ago by Assa Yeroslaviz ★ 1.9k
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0
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2.7k
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Comment: Comment: How do I change the title font size in ViolinPlot (Seurat)
16 months ago by Assa Yeroslaviz ★ 1.9k
3
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3
replies
2.7k
views
How do I change the title font size in ViolinPlot (Seurat)
Seurat Violin-Plot ggplot2 patchwork
updated 3 months ago by ▴ 260 • written 16 months ago by ★ 1.9k
0
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1
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2.8k
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
16 months ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
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750
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Comment: Comment: trying to count a pattern in my fastq file using bbduk
16 months ago by Assa Yeroslaviz ★ 1.9k
0
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1
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2.8k
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
16 months ago by Assa Yeroslaviz ★ 1.9k
5
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12
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2.8k
views
UMI-Tools knee-method has great influence on the results of white list
single-cell whitelist UMI RNA UMI-Tools
updated 15 months ago by 22k • written 16 months ago by ★ 1.9k
0
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3
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750
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trying to count a pattern in my fastq file using bbduk
java bbduk bbmap fastq
updated 16 months ago by 153k • written 16 months ago by ★ 1.9k
0
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0
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2.7k
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Comment: Comment: why renaming Idents in Seurat object doesn't work?
16 months ago by Assa Yeroslaviz ★ 1.9k
0
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3
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2.7k
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why renaming Idents in Seurat object doesn't work?
Seurat RenameIdents R
16 months ago by Assa Yeroslaviz ★ 1.9k
0
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0
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2.7k
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Answer: Answer: why renaming Idents in Seurat object doesn't work?
updated 16 months ago by 45k • written 16 months ago by ★ 1.9k
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0
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2.5k
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Comment: Comment: Can index hopping lead to more reads in samples?
17 months ago by Assa Yeroslaviz ★ 1.9k
0
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0
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2.5k
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Comment: Comment: Can index hopping lead to more reads in samples?
17 months ago by Assa Yeroslaviz ★ 1.9k
0
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1
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2.5k
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Comment: Comment: Can index hopping lead to more reads in samples?
17 months ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
2.5k
views
Comment: Comment: Can index hopping lead to more reads in samples?
17 months ago by Assa Yeroslaviz ★ 1.9k
0
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0
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2.5k
views
Comment: Comment: Can index hopping lead to more reads in samples?
17 months ago by Assa Yeroslaviz ★ 1.9k
1
vote
9
replies
2.5k
views
Can index hopping lead to more reads in samples?
index-hopping NovoSeq illumina NGS Seqeucning
17 months ago by Assa Yeroslaviz ★ 1.9k
0
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0
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523
views
What does it means, when 2-direction perturbed pathways are identified in the gage enrichment analysis?
r pathway go-enrichment gage
17 months ago by Assa Yeroslaviz ★ 1.9k
0
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0
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750
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Comment: Comment: annotating single-cell clusters from gene lists
18 months ago by Assa Yeroslaviz ★ 1.9k
0
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2
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750
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annotating single-cell clusters from gene lists
annotation FindAllMarkers Seurat cell-type
updated 18 months ago by 45k • written 18 months ago by ★ 1.9k
0
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0
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367
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Correlating Chip-Seq and proteimics results
chip-seq correlations proteomics
19 months ago by Assa Yeroslaviz ★ 1.9k
0
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0
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622
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Understanding Homer output for makeTagDirectory
chip-seq peaks homer makeTagDirectory
20 months ago by Assa Yeroslaviz ★ 1.9k
3
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4
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1.3k
views
split sequences into their codons in a table
R fasta codon-table
20 months ago by Assa Yeroslaviz ★ 1.9k
1
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0
replies
1.3k
views
Answer: Answer: split sequences into their codons in a table
20 months ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
405
views
cross-correlation peak at position 0 when calculating ChIp-Seq
cross-correlation peak chip-seq phantompeak ChIPseeker
20 months ago by Assa Yeroslaviz ★ 1.9k
1
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1
reply
925
views
Annotating peak using Chipseeker for non-model organism
GenomicFeatures chipseq chipseeker annoDB TxDb
updated 20 months ago by 13k • written 20 months ago by ★ 1.9k
1
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8
replies
2.9k
views
counts of cite-seq-count vs. cellrenager varies tremendously
citeseq-count cellranger cite-seq scRNA-seq
updated 21 months ago by 89k • written 2.2 years ago by ★ 1.9k
0
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0
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637
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extracting Uniprot IDs for Kegg pathways
mapping uniprot R kegg clusterprofiler
21 months ago by Assa Yeroslaviz ★ 1.9k
0
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0
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1.4k
views
Comment: Comment: Plotting gene Expression per pathway
23 months ago by Assa Yeroslaviz ★ 1.9k
0
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1
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1.4k
views
Comment: Comment: Plotting gene Expression per pathway
23 months ago by Assa Yeroslaviz ★ 1.9k
1
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4
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1.4k
views
Plotting gene Expression per pathway
GO-enrichment gene-expression R ggplot RNA-seq
23 months ago by Assa Yeroslaviz ★ 1.9k
3
votes
6
replies
1.8k
views
summarize consecutive columns over a data frame
tidyverse r offtopic
updated 24 months ago by 45k • written 2.0 years ago by ★ 1.9k
0
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1
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1.8k
views
Comment: Comment: summarize consecutive columns over a data frame
2.0 years ago by Assa Yeroslaviz ★ 1.9k
1
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3
replies
1.5k
views
trajectory-like graph for a data frame
trajectory rna-seq tidyverse r velocity
updated 2.0 years ago by ★ 19k • written 2.0 years ago by ★ 1.9k
0
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1
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1.5k
views
Comment: Comment: trajectory-like graph for a data frame
2.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
2.9k
views
Comment: Comment: counts of cite-seq-count vs. cellrenager varies tremendously
2.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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2.9k
views
Comment: Comment: counts of cite-seq-count vs. cellrenager varies tremendously
2.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
1.2k
views
Comment: Comment: WGS sequencing data based proteomics analysis
2.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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4
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1.2k
views
WGS sequencing data based proteomics analysis
workflow UniProt proteomics WGS RNA-Seq
updated 2.2 years ago by ★ 1.3k • written 2.2 years ago by ★ 1.9k
1
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1
reply
8.3k
views
Comment: Comment: scRNA-seq CITE-seq-count bioinformatics
2.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
8.3k
views
Comment: Comment: scRNA-seq CITE-seq-count bioinformatics
2.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
8.3k
views
Answer: Answer: scRNA-seq CITE-seq-count bioinformatics
2.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
793
views
Comment: Comment: Checking significance in trend of time-series analysis for count data
2.2 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
2
replies
793
views
Checking significance in trend of time-series analysis for count data
glm RNA-Seq time-series
2.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
1.7k
views
Comment: Comment: annotating single-cell cluster from Drosophila melanogaster using SingleR?
2.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
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1.7k
views
Comment: Comment: annotating single-cell cluster from Drosophila melanogaster using SingleR?
2.2 years ago by Assa Yeroslaviz ★ 1.9k
1
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5
replies
1.7k
views
annotating single-cell cluster from Drosophila melanogaster using SingleR?
SingleR celldex cell-type-annotations scRNA
updated 2.2 years ago by ★ 1.7k • written 2.2 years ago by ★ 1.9k
2
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2
replies
2.2k
views
6 follow
Why runing scDblFinder before and after removing low QC cells gives different results
singleCellExperiment scDblFinder SMART-Seq
updated 21 months ago by ▴ 260 • written 2.3 years ago by ★ 1.9k
0
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1
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2.8k
views
what is the difference between FindVariableFeatures and FindAllMarkers?
Seurat single-cell FindVariableFeatures FindAllMarkers RNA-Seq
updated 2.3 years ago by 13k • written 2.3 years ago by ★ 1.9k
618 results • Page 2 of 13
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