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Understanding Uncommon Genotype Formats in VCF Files Generated by nf-core RNAvar Pipeline
genotype rnaseq
updated 6 weeks ago by 161k • written 6 weeks ago by ▴ 40
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2
replies
736
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How to go for Batch correction in RNA-seq expeiment conducted based on imbalanced Experimental design ?
sva rna-seq batch-effect deseq2
updated 10 months ago by ★ 1.2k • written 10 months ago by ▴ 40
2
votes
4
replies
936
views
What are the rules on when it is acceptable to use a paired t-test for lab animals?
t-test
updated 16 months ago by 43k • written 2.3 years ago by ▴ 40
1
vote
3
replies
1.6k
views
Repeated measures design matrix controlling for covariates age and sex
analysis Paired
updated 2.6 years ago by ★ 7.0k • written 2.6 years ago by ▴ 40
1
vote
7
replies
1.1k
views
GSEA Preranked Query
GSEA GEAPreranked
updated 3.4 years ago by 20 • written 3.6 years ago by ▴ 40
6
votes
5
replies
2.9k
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RNA-Seq:How to know RNA-seq data is Strand-Specific or not based on only fastq files available in public data repositories such as SRA?
rna-seq
updated 4.3 years ago by ★ 9.4k • written 5.3 years ago by ▴ 40
4
votes
6
replies
1.2k
views
Differential expression analysis of few genes from rnaseq or microarray
RNA-Seq microarray Differentially Expresses genes
4.4 years ago by ASid ▴ 40
8
votes
5
replies
4.4k
views
illumina Arrays Illumina HumanHT-12 V3.0 expression beadchip reading data
microarray Illumina
updated 4.5 years ago by 87k • written 4.5 years ago by ▴ 40
2
votes
4
replies
2.6k
views
Correlation test for multiple variables and adjusted p values
correlation gene to gene associations
updated 4.8 years ago by 11k • written 4.8 years ago by ▴ 40
0
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1
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1.2k
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rna seq single ended -Information on Rseqc report
Rseqc RNA-seq
updated 8 months ago by 43k • written 5.3 years ago by ▴ 40
0
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5
replies
1.5k
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RNA seq stranded
RNA-Seq
5.3 years ago by ASid ▴ 40
2
votes
4
replies
14k
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How to use TPM from RNA seq data analysis for differential gene expression analysis? which statistical methods are reuired to be performed.
RNA-Seq
updated 6.0 years ago by 20 • written 8.0 years ago by ▴ 40
1
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2
replies
3.7k
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WGCNA export network into cytoscape : problem
R wgcna cytoscape network export
updated 6.9 years ago by 47k • written 6.9 years ago by ▴ 40
0
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7
replies
3.2k
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Illumina microarray dataset analysis
microarray illumina chip data
updated 7.9 years ago by ▴ 50 • written 7.9 years ago by ▴ 40
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