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2
votes
1
reply
656
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How to combine the outputs of repeat annotation softwares
RepeatProteinMasker TRF RepeatMasker RepeatModeler
updated 6 months ago by • 0 • written 2.3 years ago by ▴ 80
2
votes
5
replies
1.8k
views
convention from vcf to plink
plink
updated 19 months ago by ▴ 10 • written 4.4 years ago by ▴ 80
0
votes
0
replies
311
views
how to extract the phase 1 sites of codon aligned derived from PAL2NAL
codon PAL2NAL
updated 10 months ago by 40k • written 21 months ago by ▴ 80
1
vote
0
replies
386
views
Issues when running r8s for an ultrametric tree
tree orthofinder r8s ultrametric
22 months ago by boymin2020 ▴ 80
0
votes
1
reply
564
views
Query about Expansion/Contraction number of the gene families in CAFE
r8s RAxML CAFE
updated 22 months ago by ▴ 100 • written 22 months ago by ▴ 80
4
votes
13
replies
2.8k
views
6 follow
large number of contigs after assembly
Nanopore genome assembly wtdbg2 sequencing
updated 2.0 years ago by 5.5k • written 2.1 years ago by ▴ 80
0
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1
reply
2.8k
views
Comment: Comment: large number of contigs after assembly
2.1 years ago by boymin2020 ▴ 80
0
votes
1
reply
2.8k
views
Comment: Comment: large number of contigs after assembly
2.1 years ago by boymin2020 ▴ 80
0
votes
0
replies
2.8k
views
Comment: Comment: large number of contigs after assembly
2.1 years ago by boymin2020 ▴ 80
0
votes
1
reply
2.8k
views
Comment: Comment: large number of contigs after assembly
2.1 years ago by boymin2020 ▴ 80
0
votes
1
reply
2.8k
views
Comment: Comment: large number of contigs after assembly
2.1 years ago by boymin2020 ▴ 80
0
votes
0
replies
604
views
Comment: Comment: About runing Pilon on individual chromosomes when polish draft genome assembly
2.1 years ago by boymin2020 ▴ 80
1
vote
2
replies
604
views
About runing Pilon on individual chromosomes when polish draft genome assembly
Pilon chromosome polish genome draft
2.1 years ago by boymin2020 ▴ 80
0
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0
replies
2.3k
views
Comment: Comment: Issue about "Augustus did not recognize any genes"
2.5 years ago by boymin2020 ▴ 80
0
votes
2
replies
2.3k
views
Comment: Comment: Issue about "Augustus did not recognize any genes"
2.5 years ago by boymin2020 ▴ 80
1
vote
5
replies
2.3k
views
Issue about "Augustus did not recognize any genes"
Augustus BUSCO
2.5 years ago by boymin2020 ▴ 80
0
votes
0
replies
740
views
Comment: C: preprocess of the nanopore seqeucning data
2.6 years ago by boymin2020 ▴ 80
0
votes
0
replies
1.7k
views
Answer: A: ERROR UTR only implemented with shadow and partial or complete. Augustus
2.6 years ago by boymin2020 ▴ 80
1
vote
2
replies
740
views
preprocess of the nanopore seqeucning data
nanopore cat fastq
updated 2.6 years ago by 47k • written 2.6 years ago by ▴ 80
0
votes
0
replies
659
views
Invalid reference index -1 error in Pilon
pilon wtdbg2 long-read assembly
2.8 years ago by boymin2020 ▴ 80
0
votes
1
reply
710
views
Comment: C: softwares for gene prediction on assembly of nanopore sequencing reads
2.9 years ago by boymin2020 ▴ 80
2
votes
3
replies
710
views
softwares for gene prediction on assembly of nanopore sequencing reads
nanopore gene prediction
updated 2.9 years ago by 14k • written 2.9 years ago by ▴ 80
0
votes
0
replies
1.4k
views
Comment: C: Questions about the Getting-started of wtdbg2
2.9 years ago by boymin2020 ▴ 80
1
vote
3
replies
1.4k
views
Questions about the Getting-started of wtdbg2
wtdbg2 nanopore Illumina
updated 2.9 years ago by 34k • written 2.9 years ago by ▴ 80
1
vote
2
replies
724
views
methods/tools to compare/alignment two chromosome-level long DNA sequences
alignment chromosome-level comparative genomics
3.1 years ago by boymin2020 ▴ 80
0
votes
0
replies
724
views
Comment: A: methods/tools to compare/alignment two chromosome-level long DNA sequences
3.1 years ago by boymin2020 ▴ 80
0
votes
0
replies
1.8k
views
Comment: C: Query about memory size usage of Hisat2
3.4 years ago by boymin2020 ▴ 80
0
votes
0
replies
1.8k
views
Comment: C: Query about memory size usage of Hisat2
3.4 years ago by boymin2020 ▴ 80
0
votes
1
reply
1.8k
views
Comment: C: Query about memory size usage of Hisat2
3.4 years ago by boymin2020 ▴ 80
0
votes
1
reply
1.8k
views
Comment: C: Query about memory size usage of Hisat2
3.4 years ago by boymin2020 ▴ 80
0
votes
8
replies
1.8k
views
Query about memory size usage of Hisat2
RNA-Seq Hisat2 silkworm
3.4 years ago by boymin2020 ▴ 80
0
votes
1
reply
1.0k
views
question about the equation of counts in STAR ReadsPerGene.out.tab
STAR ReadsPerGene.out.tab
updated 3.8 years ago by 34k • written 3.8 years ago by ▴ 80
0
votes
0
replies
1.8k
views
Comment: C: convention from vcf to plink
4.4 years ago by boymin2020 ▴ 80
0
votes
0
replies
1.8k
views
Comment: C: convention from vcf to plink
4.4 years ago by boymin2020 ▴ 80
0
votes
1
reply
761
views
Input for -w options of smartpca.perl
smartpca
4.6 years ago by boymin2020 ▴ 80
4
votes
1
reply
2.1k
views
Questions about gene length and GC content in CQN normaliztion
CQN RNA-Seq gene length GC content
updated 4.6 years ago by ▴ 240 • written 4.8 years ago by ▴ 80
0
votes
0
replies
7.8k
views
Comment: C: Question about the reliability of --check-sex in PLINK2
5.1 years ago by boymin2020 ▴ 80
0
votes
1
reply
7.8k
views
Comment: C: Question about the reliability of --check-sex in PLINK2
5.1 years ago by boymin2020 ▴ 80
0
votes
1
reply
7.8k
views
Comment: C: Question about the reliability of --check-sex in PLINK2
updated 5.1 years ago by 40k • written 5.1 years ago by ▴ 80
5
votes
9
replies
7.8k
views
Question about the reliability of --check-sex in PLINK2
PLINK2 sex-check
updated 5.1 years ago by 10k • written 5.1 years ago by ▴ 80
0
votes
1
reply
1.2k
views
Comment: C: Chromosome lost after merge with vcf-merge
5.1 years ago by boymin2020 ▴ 80
0
votes
1
reply
1.2k
views
Comment: C: Chromosome lost after merge with vcf-merge
5.1 years ago by boymin2020 ▴ 80
1
vote
5
replies
1.2k
views
Chromosome lost after merge with vcf-merge
vcf-merge
5.1 years ago by boymin2020 ▴ 80
0
votes
1
reply
1.0k
views
DE heatmap before or after limma adjustment
Heapmap limma DE
updated 5.1 years ago by 103k • written 5.2 years ago by ▴ 80
0
votes
1
reply
1.8k
views
Comment: C: MaxQuant LFQ data cleanup
5.2 years ago by boymin2020 ▴ 80
1
vote
3
replies
1.8k
views
MaxQuant LFQ data cleanup
MaxQuant
updated 5.2 years ago by 103k • written 5.2 years ago by ▴ 80
0
votes
1
reply
2.3k
views
Comment: C: Read length of RNA-seq from HiSeq 2500
5.4 years ago by boymin2020 ▴ 80
0
votes
1
reply
1.6k
views
pancreatic cancer datasets
pancreatic cancer dataset
updated 5.5 years ago by 86k • written 5.5 years ago by ▴ 80
0
votes
0
replies
987
views
tRNA calling in RNA-seq dataset from a standard sequencing run
rna-seq tRNA methylation
5.5 years ago by boymin2020 ▴ 80
0
votes
1
reply
2.3k
views
Comment: C: Read length of RNA-seq from HiSeq 2500
5.5 years ago by boymin2020 ▴ 80
64 results • Page 1 of 2
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