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526
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Comment: Comment: LD store2 cannot be matched
10 months ago by landscape95 ▴ 190
0
votes
1
reply
526
views
Comment: Comment: LD store2 cannot be matched
10 months ago by landscape95 ▴ 190
0
votes
0
replies
782
views
Comment: Comment: Clumping with r2=0 and 250kb radius in plink
12 months ago by landscape95 ▴ 190
1
vote
3
replies
782
views
Clumping with r2=0 and 250kb radius in plink
plink clump
12 months ago by landscape95 ▴ 190
0
votes
0
replies
782
views
Comment: Comment: Clumping with r2=0 and 250kb radius in plink
12 months ago by landscape95 ▴ 190
2
votes
7
replies
6.7k
views
7 follow
Downloading from GEO
GEO
updated 23 months ago by ★ 2.3k • written 7.4 years ago by ▴ 190
0
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0
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778
views
Comment: Comment: PRS with multiple panels of SNP weights
2.3 years ago by landscape95 ▴ 190
2
votes
2
replies
778
views
PRS with multiple panels of SNP weights
PRS
2.3 years ago by landscape95 ▴ 190
0
votes
0
replies
2.0k
views
MTG2 error forrtl: severe (174): SIGSEGV, segmentation fault occurred
MTG2
updated 4.5 years ago by 20 • written 5.8 years ago by ▴ 190
4
votes
1
reply
1.6k
views
Single cell Drop-Seq question
singlecell
updated 4.6 years ago by 20 • written 6.4 years ago by ▴ 190
5
votes
6
replies
7.4k
views
Plink2 error: Skipping --glm regression on phenotype 'PHENO1' since variance inflation factor for covariate 'COVAR1' is too high.
GWAS PLINK
updated 5.1 years ago by ▴ 10 • written 5.9 years ago by ▴ 190
0
votes
2
replies
1.1k
views
Estimate the genomic relationship between Discovery and Target sample in PRS
GWAS PRS
updated 5.4 years ago by ★ 4.8k • written 5.4 years ago by ▴ 190
0
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1
reply
2.1k
views
Comment: C: Adjusting binary phenotype (case/ctrl) for Polygenic Risk Score (PRS)
5.4 years ago by landscape95 ▴ 190
1
vote
3
replies
2.1k
views
Adjusting binary phenotype (case/ctrl) for Polygenic Risk Score (PRS)
PRS
updated 5.4 years ago by ★ 4.8k • written 5.4 years ago by ▴ 190
0
votes
0
replies
2.0k
views
Comment: C: Infer pedigree from Kinship coefficients
5.6 years ago by landscape95 ▴ 190
2
votes
2
replies
2.0k
views
Infer pedigree from Kinship coefficients
GWAS Kinship
updated 5.6 years ago by ▴ 20 • written 5.7 years ago by ▴ 190
1
vote
1
reply
2.0k
views
PRSice PRS calculation warning Mismatched SNPs. Is it due to using multi-covariate for SNP effect size?
GWAS PRSice
updated 5.7 years ago by ★ 4.8k • written 5.9 years ago by ▴ 190
2
votes
1
reply
1.3k
views
PRSice threshold result is not as expected
GWAS PRSice
updated 5.7 years ago by ★ 4.8k • written 5.8 years ago by ▴ 190
0
votes
1
reply
1.7k
views
Missing lots of SNP while clumping
PRSice
5.8 years ago by landscape95 ▴ 190
0
votes
0
replies
1.9k
views
Comment: C: Get SNP information with association test with PLINK
5.8 years ago by landscape95 ▴ 190
0
votes
1
reply
1.9k
views
Comment: C: Get SNP information with association test with PLINK
5.8 years ago by landscape95 ▴ 190
4
votes
4
replies
1.9k
views
Get SNP information with association test with PLINK
GWAS Plink
updated 5.8 years ago by 12k • written 5.8 years ago by ▴ 190
0
votes
0
replies
7.4k
views
Comment: C: Plink2 error: Skipping --glm regression on phenotype 'PHENO1' since variance inf
5.8 years ago by landscape95 ▴ 190
0
votes
1
reply
7.4k
views
Comment: C: Plink2 error: Skipping --glm regression on phenotype 'PHENO1' since variance inf
5.9 years ago by landscape95 ▴ 190
0
votes
0
replies
1.3k
views
Using SSrGE for SNV calling
SSrGE SNV
5.9 years ago by landscape95 ▴ 190
0
votes
1
reply
985
views
Comment: C: Viewing large compressed genetic relationship matrix .grm file
5.9 years ago by landscape95 ▴ 190
0
votes
3
replies
985
views
Viewing large compressed genetic relationship matrix .grm file
GCTA
5.9 years ago by landscape95 ▴ 190
0
votes
0
replies
7.4k
views
Comment: C: Plink2 error: Skipping --glm regression on phenotype 'PHENO1' since variance inf
5.9 years ago by landscape95 ▴ 190
0
votes
0
replies
3.7k
views
Comment: C: Parallel in PLINK for linear association for SNP effects
5.9 years ago by landscape95 ▴ 190
3
votes
2
replies
3.7k
views
Parallel in PLINK for linear association for SNP effects
GWAS Plink
updated 5.9 years ago by 11k • written 5.9 years ago by ▴ 190
0
votes
1
reply
4.8k
views
Comment: C: Missing data in covariate file in PLINK
5.9 years ago by landscape95 ▴ 190
1
vote
3
replies
4.8k
views
Missing data in covariate file in PLINK
GWAS
updated 5.9 years ago by 4.1k • written 5.9 years ago by ▴ 190
0
votes
0
replies
1.4k
views
GWAS Retrieve Target Sample from a whole set of samples and PRS in PRSice tool
GWAS Plink
5.9 years ago by landscape95 ▴ 190
0
votes
0
replies
2.7k
views
Comment: C: GWAS Make bed file from fam and bim and Polygenic Risk Score calculation
5.9 years ago by landscape95 ▴ 190
1
vote
3
replies
2.7k
views
GWAS Make bed file from fam and bim and Polygenic Risk Score calculation
GWAS plink
updated 5.9 years ago by 12k • written 5.9 years ago by ▴ 190
0
votes
0
replies
2.7k
views
Comment: C: GWAS Make bed file from fam and bim and Polygenic Risk Score calculation
5.9 years ago by landscape95 ▴ 190
0
votes
0
replies
858
views
Selecting TargetScan datatype
data
updated 5.9 years ago by 20 • written 6.0 years ago by ▴ 190
0
votes
1
reply
1.4k
views
TargetScan search for miR-10b-5p
data
6.0 years ago by landscape95 ▴ 190
0
votes
0
replies
1.6k
views
Data for comparison between control and treat samples (cells or patients) by single-cell RNA-Seq
scRNA-Seq
6.1 years ago by landscape95 ▴ 190
2
votes
1
reply
2.3k
views
RNA-Seq data from Firebrowse TCGA
RNA-Seq
6.1 years ago by landscape95 ▴ 190
1
vote
3
replies
2.5k
views
Combine microarray and RNA-seq gene expression for differentially expression analysis
RNA-Seq microarray DEG
updated 2.7 years ago by ▴ 30 • written 6.2 years ago by ▴ 190
24
votes
14
replies
52k
views
7 follow
Gene symbol convert to Entrez ID
Entrez R biomart
updated 6.2 years ago by 12k • written 7.5 years ago by ▴ 190
1
vote
1
reply
1.2k
views
Biomart package listFilter function with with_mirbase vs other mir information
R biomart
updated 6.3 years ago by ★ 2.1k • written 6.3 years ago by ▴ 190
0
votes
2
replies
1.6k
views
Download Gene Expression Data from UCSC
UCSC
updated 6.4 years ago by • 0 • written 6.4 years ago by ▴ 190
3
votes
4
replies
1.2k
views
Separate non-coding RNA from total RNA list
non-coding RNA
updated 6.4 years ago by 12k • written 6.4 years ago by ▴ 190
0
votes
0
replies
1.2k
views
Comment: C: Separate non-coding RNA from total RNA list
6.4 years ago by landscape95 ▴ 190
1
vote
1
reply
1.4k
views
Bedtools intersect with index
bedtools
updated 6.5 years ago by 36k • written 6.5 years ago by ▴ 190
0
votes
0
replies
2.4k
views
Comment: C: Data preprocessing with background correction and normalization
6.6 years ago by landscape95 ▴ 190
0
votes
1
reply
2.4k
views
Comment: C: Data preprocessing with background correction and normalization
6.6 years ago by landscape95 ▴ 190
4
votes
7
replies
2.4k
views
Data preprocessing with background correction and normalization
RNA-Seq
6.6 years ago by landscape95 ▴ 190
102 results • Page 1 of 3
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