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293
votes
40
replies
199k
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30 follow
Tutorial: How to download raw sequence data from GEO/SRA
fastq SRA bam GEO
updated 8 months ago by ▴ 400 • written 10.9 years ago by 20k
310
votes
33
replies
128k
views
26 follow
Tutorial: Cheat Sheet For One-Based Vs Zero-Based Coordinate Systems
coordinates
updated 10 months ago by ▴ 190 • written 11.7 years ago by 20k
0
votes
0
replies
16k
views
Comment: Comment: Machine Learning For Cancer Classification - Part 4 - Plotting A Kaplan-Meier Cu
11 months ago by Obi Griffith 20k
0
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0
replies
16k
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Comment: Comment: Machine Learning For Cancer Classification - Part 4 - Plotting A Kaplan-Meier Cu
11 months ago by Obi Griffith 20k
0
votes
0
replies
16k
views
Comment: Comment: Machine Learning For Cancer Classification - Part 4 - Plotting A Kaplan-Meier Cu
11 months ago by Obi Griffith 20k
84
votes
29
replies
36k
views
20 follow
Tutorial: How to create a mutation landscape (waterfall) plot with GenVisR
BioConductor GenVisR Graphics R
updated 23 months ago by • 0 • written 9.3 years ago by 20k
35
votes
17
replies
18k
views
12 follow
Tutorial: Machine Learning For Cancer Classification - Part 3 - Predicting With A Random Forest Classifier
R classification cancer randomForest machine-learning
11 months ago by Obi Griffith 20k
198
votes
46
replies
76k
views
34 follow
Tutorial: Analysing Microarray Data In Bioconductor
microarray-analysis bioconductor
updated 3 months ago by • 0 • written 12.8 years ago by 20k
64
votes
8
replies
9.1k
views
7 follow
Forum: Isaac Asimov Accurately Predicts Woes Of Bioinformatician
bioinformatician
updated 2.4 years ago by 45k • written 12.2 years ago by 20k
2
votes
0
replies
1.9k
views
Job: Postdoctoral Scientist Position in Computational Biology at University of Missouri
scRNAseq postdoc ChIP-Seq
updated 2.1 years ago by 45k • written 5.4 years ago by 20k
0
votes
1
reply
3.1k
views
Comment: C: So how big is bioinformatics? Well a lot bigger than I thought ...
updated 5.5 years ago by 45k • written 11.1 years ago by 20k
0
votes
0
replies
199k
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Comment: A: How to download raw sequence data from GEO/SRA
updated 5.5 years ago by 45k • written 9.4 years ago by 20k
1
vote
0
replies
1.8k
views
News: Advanced Sequencing Technologies & Bioinformatics Analysis Course at CSHL: November 3 - 15, 2020
course sequencing workshop
updated 2.1 years ago by 45k • written 5.5 years ago by 20k
2
votes
0
replies
3.5k
views
Answer: A: CIVIC database search for curates summary of clinical variants
updated 5.5 years ago by 45k • written 9.4 years ago by 20k
12
votes
0
replies
6.4k
views
Answer: A: Fpkm Or Rpkm Equivalent For Exome Sequencing Data
updated 5.6 years ago by 45k • written 12.1 years ago by 20k
9
votes
1
reply
11k
views
Answer: A: Human Gene Regulatory Database
updated 5.6 years ago by 45k • written 12.4 years ago by 20k
6
votes
2
replies
26k
views
Answer: A: Rna-Seq Data In Public Database
updated 5.6 years ago by 45k • written 12.8 years ago by 20k
2
votes
0
replies
1.9k
views
Job: Senior Scientist (Curator) - CIViC Editor at McDonnell Genome Institute (Washington University, St Louis USA)
civic biocuration cancer genomics
updated 2.1 years ago by 45k • written 5.8 years ago by 20k
1
vote
0
replies
4.8k
views
Answer: A: Book Recommendations For Enjoyable Read On Mid Level Or Advanced Perl Or Other P
updated 5.8 years ago by 45k • written 13.3 years ago by 20k
2
votes
0
replies
8.2k
views
Answer: A: Where Should I Apply To Graduate School For Bioinformatics?
updated 5.8 years ago by 45k • written 13.3 years ago by 20k
6
votes
0
replies
5.4k
views
Answer: A: How Best Identify Bioinformatics Candidate
updated 5.8 years ago by 45k • written 13.4 years ago by 20k
3
votes
1
reply
4.5k
views
Answer: A: Does Illumina Paired End Reads From Rna Seq Need To Be Groomed?
updated 5.8 years ago by 45k • written 13.4 years ago by 20k
4
votes
0
replies
25k
views
Answer: A: Tools For Visualizing Overlap Between Go Terms
updated 5.8 years ago by 45k • written 13.4 years ago by 20k
2
votes
0
replies
67k
views
Answer: A: What Is The Difference Between Hg18 And Hg19?
updated 5.8 years ago by 45k • written 13.4 years ago by 20k
0
votes
1
reply
187k
views
Comment: C: How Do I Draw A Heatmap In R With Both A Color Key And Multiple Color Side Bars?
updated 6.0 years ago by 45k • written 12.8 years ago by 20k
0
votes
0
replies
187k
views
Comment: C: How Do I Draw A Heatmap In R With Both A Color Key And Multiple Color Side Bars?
updated 6.0 years ago by 45k • written 13.4 years ago by 20k
152
votes
42
replies
187k
views
22 follow
How Do I Draw A Heatmap In R With Both A Color Key And Multiple Color Side Bars?
heatmap r
updated 3.1 years ago by 45k • written 13.4 years ago by 20k
4
votes
1
reply
29k
views
Answer: A: Generate All Possible Permutations Of Sample Labels In R
updated 6.1 years ago by 45k • written 13.3 years ago by 20k
10
votes
3
replies
7.1k
views
Tool: GenVisR: Genomic Visualizations in R
visualization genomic RNA-Seq genvisr
updated 2.1 years ago by 45k • written 9.1 years ago by 20k
8
votes
1
reply
4.3k
views
Answer: A: Paternity Testing from WGS Trio
6.8 years ago by Obi Griffith 20k
3
votes
0
replies
17k
views
Answer: A: Determine Whether A Gene Product Is A Transcription Factor
updated 6.8 years ago by 45k • written 13.3 years ago by 20k
20
votes
4
replies
15k
views
Tutorial: How To Install A Specific Cdf Package For Use In Bioconductor
bioconductor affymetrix
updated 2.4 years ago by 45k • written 12.3 years ago by 20k
10
votes
0
replies
44k
views
Answer: A: What read lengths are produced by modern Illumina sequencers?
7.0 years ago by Obi Griffith 20k
21
votes
6
replies
9.1k
views
6 follow
Method To Identify Viral Integration Site In Human Genome From Ngs Data?
genome
updated 7.1 years ago by ▴ 30 • written 12.3 years ago by 20k
84
votes
7
replies
187k
views
Answer: A: How Do I Draw A Heatmap In R With Both A Color Key And Multiple Color Side Bars?
updated 7.2 years ago by 102k • written 13.4 years ago by 20k
2
votes
0
replies
128k
views
Comment: C: Cheat Sheet For One-Based Vs Zero-Based Coordinate Systems
7.2 years ago by Obi Griffith 20k
0
votes
1
reply
128k
views
Comment: C: Cheat Sheet For One-Based Vs Zero-Based Coordinate Systems
7.2 years ago by Obi Griffith 20k
11
votes
1
reply
15k
views
Answer: A: How Do I View Gene Annotations For Non-Standard (E.G., Virus) Genome In Igv?
7.7 years ago by Obi Griffith 20k
91
votes
20
replies
22k
views
15 follow
Forum: Publications for individualized medicine in cancer by whole genome, exome or transcriptome sequencing
N-of-one WGS RNA-Seq next-gen Exome
updated 2.8 years ago by 45k • written 11.2 years ago by 20k
5
votes
0
replies
75k
views
Comment: C: Database Of Tumor Suppressors And/Or Oncogenes
7.9 years ago by Obi Griffith 20k
0
votes
0
replies
35k
views
Comment: C: Machine Learning For Cancer Classification - Part 1 - Preparing The Data Sets
8.2 years ago by Obi Griffith 20k
0
votes
0
replies
18k
views
Comment: C: Machine Learning For Cancer Classification - Part 3 - Predicting With A Random F
8.2 years ago by Obi Griffith 20k
1
vote
0
replies
18k
views
Comment: C: Machine Learning For Cancer Classification - Part 3 - Predicting With A Random F
8.2 years ago by Obi Griffith 20k
0
votes
1
reply
35k
views
Comment: C: Machine Learning For Cancer Classification - Part 1 - Preparing The Data Sets
8.2 years ago by Obi Griffith 20k
0
votes
0
replies
35k
views
Comment: C: Machine Learning For Cancer Classification - Part 1 - Preparing The Data Sets
8.2 years ago by Obi Griffith 20k
1
vote
0
replies
3.8k
views
Comment: C: Uneven coverage correlated with Alu sequences (and discordant read pairs) in NGS
8.4 years ago by Obi Griffith 20k
2
votes
0
replies
3.8k
views
Comment: C: Uneven coverage correlated with Alu sequences (and discordant read pairs) in NGS
8.4 years ago by Obi Griffith 20k
9
votes
6
replies
3.8k
views
Uneven coverage correlated with Alu sequences (and discordant read pairs) in NGS data
NGS WGS sequencing alignment
updated 8.4 years ago by 48k • written 8.4 years ago by 20k
0
votes
1
reply
3.6k
views
Comment: C: Plotting numbers of somatic substitutions per megabase (MB)
8.5 years ago by Obi Griffith 20k
90
votes
19
replies
35k
views
12 follow
Tutorial: Machine Learning For Cancer Classification - Part 1 - Preparing The Data Sets
classification expression bioconductor microarray machine-learning
11 months ago by Obi Griffith 20k
406 results • Page 1 of 9
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