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6
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7
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4.6k
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Online Interactive Data Visualization
python
updated 14 months ago by ▴ 90 • written 10.7 years ago by ★ 2.1k
1
vote
1
reply
1.0k
views
Comment: Comment: Query hg37 rsid information
24 months ago by Pappu ★ 2.1k
0
votes
0
replies
714
views
Comment: Comment: conversion of fasta file format to tabular format
2.0 years ago by Pappu ★ 2.1k
0
votes
1
reply
5.5k
views
Comment: Comment: Csv. To VCF. File convert
2.0 years ago by Pappu ★ 2.1k
2
votes
0
replies
910
views
Comment: Comment: Retrieval of Active site information programmatically
2.0 years ago by Pappu ★ 2.1k
1
vote
1
reply
686
views
Comment: Comment: Can I select only one gene from protein isoforms when doing gene ontology from a
2.0 years ago by Pappu ★ 2.1k
0
votes
0
replies
394
views
Comment: Comment: Differential expression between two conditions in sc RNA seq
2.0 years ago by Pappu ★ 2.1k
0
votes
1
reply
1.0k
views
Comment: Comment: Ensembl IDs
2.0 years ago by Pappu ★ 2.1k
1
vote
0
replies
2.7k
views
Comment: Comment: Batch effect correction to compare differentially expressed genes across dataset
2.0 years ago by Pappu ★ 2.1k
1
vote
1
reply
631
views
Comment: Comment: whole-genome MSA of 1000 vertebrate sequences
2.0 years ago by Pappu ★ 2.1k
0
votes
0
replies
631
views
Comment: Comment: QC of UKB BGEN format data
2.0 years ago by Pappu ★ 2.1k
0
votes
1
reply
5.5k
views
Comment: Comment: Csv. To VCF. File convert
2.0 years ago by Pappu ★ 2.1k
0
votes
1
reply
590
views
Comment: Comment: Clustering of samples based on gene expression
2.0 years ago by Pappu ★ 2.1k
0
votes
0
replies
725
views
Comment: Comment: Fastq-dump warning: too many reads at spot id
2.0 years ago by Pappu ★ 2.1k
0
votes
1
reply
716
views
Comment: Comment: Heatmap rownames as gene names displayed as ensembl ID
2.0 years ago by Pappu ★ 2.1k
0
votes
0
replies
936
views
Comment: Comment: Specific case of "bedtools intersect"
2.0 years ago by Pappu ★ 2.1k
0
votes
0
replies
821
views
Comment: Comment: How to obtain gene length of yeast for tpm computation?
2.0 years ago by Pappu ★ 2.1k
1
vote
0
replies
415
views
Comment: Comment: Parameterisation of Metallo-protein with amber
2.0 years ago by Pappu ★ 2.1k
0
votes
0
replies
1.0k
views
Comment: Comment: Get the coverage after read alignment with bwa-mem2
2.0 years ago by Pappu ★ 2.1k
0
votes
0
replies
723
views
Comment: Comment: Multiple file genome alignment with STAR
2.0 years ago by Pappu ★ 2.1k
0
votes
1
reply
910
views
Comment: Comment: Retrieval of Active site information programmatically
2.0 years ago by Pappu ★ 2.1k
0
votes
1
reply
2.7k
views
Answer: Answer: Batch effect correction to compare differentially expressed genes across dataset
2.0 years ago by Pappu ★ 2.1k
0
votes
0
replies
1.3k
views
Answer: Answer: GROMACS error
2.0 years ago by Pappu ★ 2.1k
23
votes
11
replies
1.8k
views
11 follow
Useful productivity tools for bioinformaticians
RNA-Seq ChIP-Seq R next-gen Python
updated 2.2 years ago by ▴ 10 • written 4.4 years ago by ★ 2.1k
0
votes
1
reply
605
views
genomic region haplotype
SNP
updated 3.2 years ago by 23k • written 3.4 years ago by ★ 2.1k
1
vote
3
replies
2.2k
views
Looking For A Database Of All Proteins Expressed/Predicted In Completely Sequenced Genomes
genome
updated 3.3 years ago by 20 • written 11.1 years ago by ★ 2.1k
2
votes
4
replies
2.0k
views
Pooling replicates for CHIP-seq peak calling
ChIP-Seq
updated 3.3 years ago by 20 • written 3.4 years ago by ★ 2.1k
0
votes
1
reply
2.5k
views
RSEM expected_count vs normalized_count
RNA-Seq
updated 3.3 years ago by ▴ 330 • written 3.5 years ago by ★ 2.1k
2
votes
3
replies
1.7k
views
fastest galaxy host
galaxy
updated 20 months ago by 43k • written 8.5 years ago by ★ 2.1k
2
votes
2
replies
594
views
Peak length for TF motif discovery
ChIP-Seq
updated 3.4 years ago by ▴ 230 • written 3.4 years ago by ★ 2.1k
0
votes
0
replies
2.0k
views
Comment: C: Pooling replicates for CHIP-seq peak calling
3.4 years ago by Pappu ★ 2.1k
2
votes
2
replies
719
views
Genome region annotation
next-gen ChIP-Seq
3.5 years ago by Pappu ★ 2.1k
0
votes
1
reply
2.0k
views
Comment: C: ChIP-seq Motif Enrichment
3.5 years ago by Pappu ★ 2.1k
0
votes
1
reply
2.0k
views
Comment: C: ChIP-seq Motif Enrichment
3.5 years ago by Pappu ★ 2.1k
0
votes
2
replies
2.0k
views
Comment: C: ChIP-seq Motif Enrichment
3.5 years ago by Pappu ★ 2.1k
5
votes
8
replies
2.0k
views
ChIP-seq Motif Enrichment
ChIP-Seq
3.5 years ago by Pappu ★ 2.1k
2
votes
1
reply
596
views
How to do ChIP-seq QC
ChIP-Seq
updated 3.5 years ago by ★ 16k • written 3.5 years ago by ★ 2.1k
1
vote
0
replies
3.0k
views
Comment: C: Separating each cell in fastq file
3.5 years ago by Pappu ★ 2.1k
0
votes
1
reply
1.0k
views
Comment: C: How to do a multi-snp/haplotype based GWAS instead of a single snp GWAS in R?
3.5 years ago by Pappu ★ 2.1k
3
votes
8
replies
3.8k
views
ChIP-seq or Cut and Run Differential Binding Analysis
ChIP-Seq
updated 3.5 years ago by ★ 2.0k • written 3.5 years ago by ★ 2.1k
0
votes
0
replies
869
views
Comment: C: Organizing Scripts for Bioinformatics Analysis
3.5 years ago by Pappu ★ 2.1k
5
votes
4
replies
869
views
Organizing Scripts for Bioinformatics Analysis
RNA-Seq ChIP-Seq R python
updated 3.5 years ago by 82k • written 3.5 years ago by ★ 2.1k
0
votes
0
replies
3.8k
views
Comment: C: ChIP-seq or Cut and Run Differential Binding Analysis
3.5 years ago by Pappu ★ 2.1k
0
votes
1
reply
3.8k
views
Comment: C: ChIP-seq or Cut and Run Differential Binding Analysis
3.5 years ago by Pappu ★ 2.1k
2
votes
3
replies
1.9k
views
combining reads from multiple lanes for DE analysis
RNA-Seq
updated 4.2 years ago by 14k • written 5.2 years ago by ★ 2.1k
0
votes
1
reply
2.9k
views
Comment: C: GUI framework for sequence data analysis and visulaization
updated 4.4 years ago by 43k • written 8.3 years ago by ★ 2.1k
0
votes
1
reply
2.9k
views
Comment: C: GUI framework for sequence data analysis and visulaization
updated 4.4 years ago by 43k • written 8.3 years ago by ★ 2.1k
0
votes
1
reply
839
views
Comment: C: DE Analysis of Protein Coding Genes
4.6 years ago by Pappu ★ 2.1k
2
votes
3
replies
839
views
DE Analysis of Protein Coding Genes
RNA-Seq
4.6 years ago by Pappu ★ 2.1k
2
votes
2
replies
2.5k
views
Genomic Locus Diagram
python biopython
updated 5.0 years ago by 20 • written 10.2 years ago by ★ 2.1k
429 results • Page 1 of 9
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