Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
2
replies
811
views
How to convert Mummer coords output to a Bed file?
nucmer mummer bed
updated 19 months ago by 45k • written 19 months ago by ▴ 290
0
votes
0
replies
1.6k
views
Comment: Comment: Why FindMarkers between conditions shows pct.1 and pct.2 as 1 for most of the ge
2.3 years ago by Biologist ▴ 290
0
votes
2
replies
1.6k
views
Why FindMarkers between conditions shows pct.1 and pct.2 as 1 for most of the genes?
seurat FindMarkers scRNA-seq
updated 2.3 years ago by 45k • written 2.3 years ago by ▴ 290
3
votes
3
replies
1.4k
views
gtf2bed doesn't give gene_id in the bed file
rnaseq gtf bed
updated 3.1 years ago by ▴ 700 • written 3.1 years ago by ▴ 290
0
votes
0
replies
1.4k
views
Comment: Comment: gtf2bed doesn't give gene_id in the bed file
3.1 years ago by Biologist ▴ 290
0
votes
1
reply
6.2k
views
Comment: Comment: Gene length table from gtf file for rpkm() function
3.1 years ago by Biologist ▴ 290
0
votes
1
reply
2.5k
views
Comment: C: How to extract required lines of particular chromosome from a gtf file?
4.9 years ago by Biologist ▴ 290
1
vote
3
replies
2.5k
views
How to extract required lines of particular chromosome from a gtf file?
RNA-Seq gtf linux command
updated 4.9 years ago by 45k • written 4.9 years ago by ▴ 290
0
votes
6
replies
5.5k
views
Error with snakemake
snakemake python pipeline salmon
updated 5.2 years ago by 20 • written 7.3 years ago by ▴ 290
0
votes
1
reply
993
views
Problem with edgesfile into cytoscape for network plot
RNA-Seq wgcna r cytoscape
updated 5.3 years ago by 3.9k • written 5.3 years ago by ▴ 290
0
votes
0
replies
3.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
5.4 years ago by Biologist ▴ 290
2
votes
14
replies
3.1k
views
Problem with differential analysis between two groups having low raw counts
RNA-Seq edger differential analysis expression
updated 5.4 years ago by 89k • written 5.4 years ago by ▴ 290
0
votes
0
replies
3.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
5.4 years ago by Biologist ▴ 290
0
votes
1
reply
3.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
5.4 years ago by Biologist ▴ 290
0
votes
1
reply
3.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
5.4 years ago by Biologist ▴ 290
0
votes
1
reply
3.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
5.4 years ago by Biologist ▴ 290
0
votes
1
reply
3.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
5.4 years ago by Biologist ▴ 290
0
votes
1
reply
3.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
5.4 years ago by Biologist ▴ 290
0
votes
1
reply
4.8k
views
Comment: C: How to get different outputs for kallisto on multiple samples?
5.6 years ago by Biologist ▴ 290
0
votes
2
replies
4.8k
views
Comment: C: How to get different outputs for kallisto on multiple samples?
5.6 years ago by Biologist ▴ 290
2
votes
6
replies
4.8k
views
How to get different outputs for kallisto on multiple samples?
kallisto RNA-Seq geneexpression slurm sbatch
updated 5.6 years ago by 15k • written 5.6 years ago by ▴ 290
0
votes
0
replies
5.7k
views
Comment: C: WGCNA: Problem with selecting soft threshold
5.6 years ago by Biologist ▴ 290
0
votes
1
reply
5.7k
views
Comment: C: WGCNA: Problem with selecting soft threshold
5.6 years ago by Biologist ▴ 290
0
votes
1
reply
5.7k
views
Comment: C: WGCNA: Problem with selecting soft threshold
5.6 years ago by Biologist ▴ 290
0
votes
1
reply
5.7k
views
Comment: C: WGCNA: Problem with selecting soft threshold
5.6 years ago by Biologist ▴ 290
0
votes
1
reply
5.7k
views
Comment: C: WGCNA: Problem with selecting soft threshold
5.6 years ago by Biologist ▴ 290
1
vote
12
replies
5.7k
views
WGCNA: Problem with selecting soft threshold
RNA-Seq wgcna r network threshold
5.6 years ago by Biologist ▴ 290
4
votes
13
replies
6.6k
views
Stringtie with Gencode gtf file doesn't give any gene_ids or transcript_ids?
RNA-Seq stringtie lncRNA gtf gencode
updated 5.8 years ago by ▴ 10 • written 7.6 years ago by ▴ 290
0
votes
1
reply
1.4k
views
Comment: C: Any R package to check the expression of single gene in multiple cancer types of
6.0 years ago by Biologist ▴ 290
1
vote
3
replies
1.4k
views
Any R package to check the expression of single gene in multiple cancer types of TCGA?
RNA-Seq tcga r geneexpression
updated 6.0 years ago by 89k • written 6.0 years ago by ▴ 290
0
votes
1
reply
7.0k
views
Comment: C: Classifying the samples based on zscore of a specific gene
6.0 years ago by Biologist ▴ 290
0
votes
1
reply
7.0k
views
Comment: C: Classifying the samples based on zscore of a specific gene
6.0 years ago by Biologist ▴ 290
0
votes
1
reply
7.0k
views
Comment: C: Classifying the samples based on zscore of a specific gene
6.0 years ago by Biologist ▴ 290
0
votes
1
reply
7.0k
views
Comment: C: Classifying the samples based on zscore of a specific gene
6.0 years ago by Biologist ▴ 290
1
vote
1
reply
7.0k
views
Comment: C: Classifying the samples based on zscore of a specific gene
6.0 years ago by Biologist ▴ 290
0
votes
1
reply
7.0k
views
Comment: C: Classifying the samples based on zscore of a specific gene
6.0 years ago by Biologist ▴ 290
0
votes
1
reply
7.0k
views
Comment: C: Classifying the samples based on zscore of a specific gene
6.0 years ago by Biologist ▴ 290
0
votes
1
reply
7.0k
views
Comment: C: Classifying the samples based on zscore of a specific gene
6.0 years ago by Biologist ▴ 290
0
votes
1
reply
7.0k
views
Comment: C: Classifying the samples based on zscore of a specific gene
6.0 years ago by Biologist ▴ 290
12
votes
22
replies
7.0k
views
Classifying the samples based on zscore of a specific gene
RNA-Seq R geneexpression zscore
6.0 years ago by Biologist ▴ 290
0
votes
1
reply
1.0k
views
How to check the expression of a gene using the sequence of that gene?
RNA-Seq lncrna sequence blat ensembl
updated 6.2 years ago by ▴ 280 • written 6.2 years ago by ▴ 290
3
votes
5
replies
14k
views
How to convert featureCounts to FPKM?
RNA-Seq featurecounts fpkm r
updated 6.4 years ago by ▴ 250 • written 7.0 years ago by ▴ 290
0
votes
1
reply
5.3k
views
Comment: C: Why median is NA for some of the group outcomes in survival analysis?
6.5 years ago by Biologist ▴ 290
1
vote
3
replies
5.3k
views
Why median is NA for some of the group outcomes in survival analysis?
RNA-Seq survival kaplan-meier clinical r
updated 6.5 years ago by 27k • written 6.5 years ago by ▴ 290
3
votes
7
replies
8.3k
views
6 follow
How to make a plot with gProfileR results?
RNA-Seq gprofiler geneexpression pathways plot
updated 6.5 years ago by ▴ 30 • written 6.9 years ago by ▴ 290
0
votes
0
replies
3.9k
views
Comment: C: Error in differential analysis for samples with different time points
6.5 years ago by Biologist ▴ 290
0
votes
1
reply
3.9k
views
Comment: C: Error in differential analysis for samples with different time points
6.5 years ago by Biologist ▴ 290
3
votes
4
replies
3.9k
views
Error in differential analysis for samples with different time points
RNA-Seq r edger differential analysis
updated 6.5 years ago by 35k • written 6.5 years ago by ▴ 290
0
votes
0
replies
1.3k
views
Comment: C: genie3 for lncRNAs and mRNAs co-expression
6.6 years ago by Biologist ▴ 290
0
votes
0
replies
6.1k
views
Comment: C: Estimating gene set enrichment using Fishers exact test
6.6 years ago by Biologist ▴ 290
194 results • Page 1 of 4
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6