Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
3
votes
3
replies
429
views
gtf2bed doesn't give gene_id in the bed file
rnaseq gtf bed
updated 7 months ago by ▴ 700 • written 7 months ago by ▴ 280
0
votes
0
replies
429
views
Comment: Comment: gtf2bed doesn't give gene_id in the bed file
7 months ago by Biologist ▴ 280
0
votes
1
reply
4.3k
views
Comment: Comment: Gene length table from gtf file for rpkm() function
7 months ago by Biologist ▴ 280
0
votes
1
reply
1.1k
views
Comment: C: How to extract required lines of particular chromosome from a gtf file?
2.4 years ago by Biologist ▴ 280
1
vote
3
replies
1.1k
views
How to extract required lines of particular chromosome from a gtf file?
RNA-Seq gtf linux command
updated 2.4 years ago by 38k • written 2.4 years ago by ▴ 280
0
votes
6
replies
4.1k
views
Error with snakemake
snakemake python pipeline salmon
updated 2.7 years ago by 20 • written 4.8 years ago by ▴ 280
0
votes
1
reply
538
views
Problem with edgesfile into cytoscape for network plot
RNA-Seq wgcna r cytoscape
updated 2.8 years ago by 3.2k • written 2.8 years ago by ▴ 280
0
votes
0
replies
1.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
2.9 years ago by Biologist ▴ 280
2
votes
14
replies
1.1k
views
Problem with differential analysis between two groups having low raw counts
RNA-Seq edger differential analysis expression
updated 2.9 years ago by 71k • written 2.9 years ago by ▴ 280
0
votes
0
replies
1.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
2.9 years ago by Biologist ▴ 280
0
votes
1
reply
1.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
2.9 years ago by Biologist ▴ 280
0
votes
1
reply
1.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
2.9 years ago by Biologist ▴ 280
0
votes
1
reply
1.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
2.9 years ago by Biologist ▴ 280
0
votes
1
reply
1.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
2.9 years ago by Biologist ▴ 280
0
votes
1
reply
1.1k
views
Comment: C: Problem with differential analysis between two groups having low raw counts
2.9 years ago by Biologist ▴ 280
0
votes
1
reply
2.8k
views
Comment: C: How to get different outputs for kallisto on multiple samples?
3.1 years ago by Biologist ▴ 280
0
votes
2
replies
2.8k
views
Comment: C: How to get different outputs for kallisto on multiple samples?
3.1 years ago by Biologist ▴ 280
2
votes
6
replies
2.8k
views
How to get different outputs for kallisto on multiple samples?
kallisto RNA-Seq geneexpression slurm sbatch
updated 3.1 years ago by 13k • written 3.1 years ago by ▴ 280
0
votes
0
replies
3.0k
views
Comment: C: WGCNA: Problem with selecting soft threshold
3.1 years ago by Biologist ▴ 280
0
votes
1
reply
3.0k
views
Comment: C: WGCNA: Problem with selecting soft threshold
3.1 years ago by Biologist ▴ 280
0
votes
1
reply
3.0k
views
Comment: C: WGCNA: Problem with selecting soft threshold
3.1 years ago by Biologist ▴ 280
0
votes
1
reply
3.0k
views
Comment: C: WGCNA: Problem with selecting soft threshold
3.1 years ago by Biologist ▴ 280
0
votes
1
reply
3.0k
views
Comment: C: WGCNA: Problem with selecting soft threshold
3.1 years ago by Biologist ▴ 280
1
vote
12
replies
3.0k
views
WGCNA: Problem with selecting soft threshold
RNA-Seq wgcna r network threshold
3.1 years ago by Biologist ▴ 280
4
votes
13
replies
4.2k
views
Stringtie with Gencode gtf file doesn't give any gene_ids or transcript_ids?
RNA-Seq stringtie lncRNA gtf gencode
updated 3.3 years ago by ▴ 10 • written 5.2 years ago by ▴ 280
0
votes
1
reply
761
views
Comment: C: Any R package to check the expression of single gene in multiple cancer types of
3.5 years ago by Biologist ▴ 280
1
vote
3
replies
761
views
Any R package to check the expression of single gene in multiple cancer types of TCGA?
RNA-Seq tcga r geneexpression
updated 3.5 years ago by 85k • written 3.5 years ago by ▴ 280
0
votes
1
reply
3.2k
views
Comment: C: Classifying the samples based on zscore of a specific gene
3.5 years ago by Biologist ▴ 280
0
votes
1
reply
3.2k
views
Comment: C: Classifying the samples based on zscore of a specific gene
3.5 years ago by Biologist ▴ 280
0
votes
1
reply
3.2k
views
Comment: C: Classifying the samples based on zscore of a specific gene
3.5 years ago by Biologist ▴ 280
0
votes
1
reply
3.2k
views
Comment: C: Classifying the samples based on zscore of a specific gene
3.5 years ago by Biologist ▴ 280
1
vote
1
reply
3.2k
views
Comment: C: Classifying the samples based on zscore of a specific gene
3.5 years ago by Biologist ▴ 280
0
votes
1
reply
3.2k
views
Comment: C: Classifying the samples based on zscore of a specific gene
3.5 years ago by Biologist ▴ 280
0
votes
1
reply
3.2k
views
Comment: C: Classifying the samples based on zscore of a specific gene
3.5 years ago by Biologist ▴ 280
0
votes
1
reply
3.2k
views
Comment: C: Classifying the samples based on zscore of a specific gene
3.5 years ago by Biologist ▴ 280
0
votes
1
reply
3.2k
views
Comment: C: Classifying the samples based on zscore of a specific gene
3.5 years ago by Biologist ▴ 280
12
votes
22
replies
3.2k
views
Classifying the samples based on zscore of a specific gene
RNA-Seq R geneexpression zscore
3.5 years ago by Biologist ▴ 280
0
votes
1
reply
623
views
How to check the expression of a gene using the sequence of that gene?
RNA-Seq lncrna sequence blat ensembl
updated 3.7 years ago by ▴ 280 • written 3.7 years ago by ▴ 280
3
votes
5
replies
9.7k
views
How to convert featureCounts to FPKM?
RNA-Seq featurecounts fpkm r
updated 4.0 years ago by ▴ 210 • written 4.5 years ago by ▴ 280
0
votes
1
reply
3.2k
views
Comment: C: Why median is NA for some of the group outcomes in survival analysis?
4.0 years ago by Biologist ▴ 280
1
vote
3
replies
3.2k
views
Why median is NA for some of the group outcomes in survival analysis?
RNA-Seq survival kaplan-meier clinical r
updated 4.0 years ago by 26k • written 4.0 years ago by ▴ 280
3
votes
7
replies
5.7k
views
6 follow
How to make a plot with gProfileR results?
RNA-Seq gprofiler geneexpression pathways plot
updated 4.0 years ago by ▴ 30 • written 4.4 years ago by ▴ 280
0
votes
0
replies
2.1k
views
Comment: C: Error in differential analysis for samples with different time points
4.0 years ago by Biologist ▴ 280
0
votes
1
reply
2.1k
views
Comment: C: Error in differential analysis for samples with different time points
4.0 years ago by Biologist ▴ 280
3
votes
4
replies
2.1k
views
Error in differential analysis for samples with different time points
RNA-Seq r edger differential analysis
updated 4.0 years ago by 34k • written 4.0 years ago by ▴ 280
0
votes
0
replies
752
views
Comment: C: genie3 for lncRNAs and mRNAs co-expression
4.1 years ago by Biologist ▴ 280
0
votes
0
replies
3.2k
views
Comment: C: Estimating gene set enrichment using Fishers exact test
4.1 years ago by Biologist ▴ 280
0
votes
1
reply
3.2k
views
Comment: C: Estimating gene set enrichment using Fishers exact test
4.1 years ago by Biologist ▴ 280
0
votes
1
reply
3.2k
views
Comment: C: Estimating gene set enrichment using Fishers exact test
4.1 years ago by Biologist ▴ 280
6
votes
6
replies
3.2k
views
Estimating gene set enrichment using Fishers exact test
RNA-Seq lncrna gsea fisherstest
4.1 years ago by Biologist ▴ 280
191 results • Page 1 of 4
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6