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Showing :
questions
0
votes
5
replies
1.3k
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High CPU of GATK and Picard programs
GATK
java
cpu
RAM
updated 3.2 years ago by
Biostar
20 • written 3.3 years ago by
ognjen011
▴ 260
2
votes
6
replies
1.1k
views
SarsCov2 annotation database
viral
SarsCov2
annotation
updated 3.3 years ago by
Biostar
20 • written 3.4 years ago by
ognjen011
▴ 260
0
votes
0
replies
602
views
ROC for a family of repeated variables
rna-seq
quantification
3.9 years ago by
ognjen011
▴ 260
4
votes
2
replies
936
views
Local alignment of different lengths in Biopython
alignment
4.5 years ago by
ognjen011
▴ 260
2
votes
9
replies
2.7k
views
Spot Group in SRA
sequencing
updated 4.5 years ago by
Haodong Chen
• 0 • written 6.9 years ago by
ognjen011
▴ 260
2
votes
2
replies
681
views
Checking for enrichment of certain kmers
sequence
4.5 years ago by
ognjen011
▴ 260
6
votes
5
replies
2.8k
views
Mutation position in COSMIC
COSMIC
VCF
Database
updated 4.6 years ago by
ramya.bio
• 0 • written 6.2 years ago by
ognjen011
▴ 260
0
votes
2
replies
1.1k
views
Proband of CEPH Family 1463
pedigree
4.9 years ago by
ognjen011
▴ 260
1
vote
2
replies
5.3k
views
Distance of promoter from TSS
promoter
transcription
annotation
gff
updated 5.0 years ago by
mrals89
▴ 50 • written 5.0 years ago by
ognjen011
▴ 260
2
votes
4
replies
1.4k
views
Alternative splicing convention
rna-seq
splicing
updated 5.1 years ago by
Ram
43k • written 5.1 years ago by
ognjen011
▴ 260
2
votes
5
replies
1.5k
views
Genotyping diploid organisms from Sanger AB1 files
sanger
variant-calling
updated 5.1 years ago by
trausch
★ 1.9k • written 5.1 years ago by
ognjen011
▴ 260
0
votes
0
replies
718
views
Connection of SNPs to Enzyme activity - database or tool
proteomics
SNP
5.2 years ago by
ognjen011
▴ 260
0
votes
0
replies
2.5k
views
GTEX effect sizes and violin plots
gtex
expression
eqtl
5.2 years ago by
ognjen011
▴ 260
3
votes
7
replies
1.5k
views
Finding SNPs RSID from older papers
SNP
RSID
assembly
updated 5.3 years ago by
Denise CS
★ 5.2k • written 5.3 years ago by
ognjen011
▴ 260
0
votes
0
replies
1.9k
views
Meaning of TOP/BOTTOM strand and QC implications
snp
illumina
5.4 years ago by
ognjen011
▴ 260
2
votes
3
replies
1.0k
views
Convention for protein-level changes
protein
nomenclature
5.4 years ago by
ognjen011
▴ 260
5
votes
4
replies
2.7k
views
RSID for multiple alternative variants present in a single line
rsid
vcf
genotype
5.5 years ago by
ognjen011
▴ 260
3
votes
2
replies
1.9k
views
Submiters of samples in 1000 genomes project
1000 genomes
metadata
updated 6.3 years ago by
Pierre Lindenbaum
161k • written 6.3 years ago by
ognjen011
▴ 260
4
votes
6
replies
5.3k
views
Problems while reheadering BAM with Samtools 1.3.1
Header
BAM
Samtools
6.4 years ago by
ognjen011
▴ 260
9
votes
3
replies
1.6k
views
BED files for SRA open projects
next-gen
sequencing
bed
6.5 years ago by
ognjen011
▴ 260
4
votes
6
replies
1.3k
views
Problems with exome coverage at HRNR gene
sequence
alignment
wes
hybrid capture
updated 6.6 years ago by
Kevin Blighe
87k • written 6.6 years ago by
ognjen011
▴ 260
3
votes
4
replies
2.6k
views
Filtering of RNA fastq files prior to aligment
RNA-Seq
alignment
6.6 years ago by
ognjen011
▴ 260
1
vote
2
replies
1.5k
views
Extracting descriptive metrics from variant reads in BAM
SNP
BAM
updated 6.6 years ago by
Pierre Lindenbaum
161k • written 6.6 years ago by
ognjen011
▴ 260
4
votes
2
replies
2.2k
views
Public datasets with UMI
sequencing
adapters
UMI
6.9 years ago by
ognjen011
▴ 260
3
votes
7
replies
2.9k
views
FastQC and adapters
sequencing
sequence
quality
adapters
updated 7.0 years ago by
mastal511
★ 2.1k • written 7.0 years ago by
ognjen011
▴ 260
7
votes
4
replies
1.2k
views
Read length difference between the analysis type and true reads
sequencing
7.0 years ago by
ognjen011
▴ 260
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