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Comment: Comment: Comparing multiple columns from two files using AWK
14 months ago by emiliomastriani ▴ 40
0
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4
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722
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Comparing multiple columns from two files using AWK
awk
updated 14 months ago by 44k • written 14 months ago by ▴ 40
0
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5
replies
1.8k
views
minimap2, before or after assembly?
canu nanopore minimap2
updated 2.0 years ago by 7.0k • written 2.0 years ago by ▴ 40
0
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0
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1.8k
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Comment: Comment: minimap2, before or after assembly?
2.0 years ago by emiliomastriani ▴ 40
0
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1
reply
834
views
Comment: Comment: combine headers from two fata files
2.2 years ago by emiliomastriani ▴ 40
1
vote
3
replies
834
views
combine headers from two fasta files
fasta bash awk header
updated 2.2 years ago by 6.2k • written 2.2 years ago by ▴ 40
0
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0
replies
419
views
Genome browsing from MethylDackel bedGraphCpG file
MethylDackel CpG Genome Annotation methylseq
2.6 years ago by emiliomastriani ▴ 40
0
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0
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1.2k
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Comment: Comment: Diamond and Taxonomic information
2.6 years ago by emiliomastriani ▴ 40
0
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1
reply
1.2k
views
Diamond and Taxonomic information
diamond taxids taxonkit taxonomy
2.6 years ago by emiliomastriani ▴ 40
0
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0
replies
1.1k
views
Comment: Comment: Metagenomic quantification (abundance of reads on assembled reference)
2.6 years ago by emiliomastriani ▴ 40
0
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1
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1.1k
views
Comment: Comment: Metagenomic quantification (abundance of reads on assembled reference)
2.6 years ago by emiliomastriani ▴ 40
1
vote
4
replies
1.1k
views
Metagenomic quantification (abundance of reads on assembled reference)
viral-family viral-genus abundances metagenomic contigs
2.6 years ago by emiliomastriani ▴ 40
0
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0
replies
583
views
Comment: Comment: From Methyl-Dackel to DMRs and DMCs
2.7 years ago by emiliomastriani ▴ 40
0
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1
reply
583
views
From Methyl-Dackel to DMRs and DMCs
Methyl-Dackel methyl-seq
2.7 years ago by emiliomastriani ▴ 40
0
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0
replies
1.2k
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Comment: Comment: DMR/CpG
2.7 years ago by emiliomastriani ▴ 40
0
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0
replies
1.2k
views
Comment: Comment: DMR/CpG
2.7 years ago by emiliomastriani ▴ 40
0
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4
replies
1.2k
views
DMR/CpG
Methylation DMR CpG
2.7 years ago by emiliomastriani ▴ 40
0
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0
replies
535
views
minimap2 overlap the same sequence
minimap2 yacrd overlap chimeric reads
2.7 years ago by emiliomastriani ▴ 40
0
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0
replies
1.2k
views
Comment: Comment: DMR/CpG
2.7 years ago by emiliomastriani ▴ 40
0
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1
reply
615
views
genome_updater FIX failed
NCBI viruses genome_updater.sh sequences
updated 2.9 years ago by • 0 • written 3.0 years ago by ▴ 40
0
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5
replies
1.6k
views
blast returns staxid N/A and staxids 0
blastn staxid
updated 21 months ago by 44k • written 3.0 years ago by ▴ 40
0
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1
reply
1.6k
views
Comment: Comment: blast returns staxid N/A and staxids 0
updated 3.0 years ago by 148k • written 3.0 years ago by ▴ 40
0
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1
reply
1.6k
views
Comment: Comment: blast returns staxid N/A and staxids 0
3.0 years ago by emiliomastriani ▴ 40
0
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0
replies
2.6k
views
Comment: Comment: ONT analysis on Ubuntu
3.0 years ago by emiliomastriani ▴ 40
1
vote
4
replies
2.6k
views
ONT analysis on Ubuntu
guppy calling minknow base demultiplexing ubuntu
updated 3.0 years ago by ▴ 990 • written 3.0 years ago by ▴ 40
0
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0
replies
1.5k
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Comment: Comment: Creating BLASTN database for viruses
3.0 years ago by emiliomastriani ▴ 40
0
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1
reply
1.5k
views
Comment: Comment: Creating BLASTN database for viruses
3.0 years ago by emiliomastriani ▴ 40
1
vote
4
replies
1.5k
views
Creating BLASTN database for viruses
VSSI BLASTN database NCBI virus
3.0 years ago by emiliomastriani ▴ 40
0
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0
replies
3.0k
views
Comment: Comment: kraken2-build and kraken-build both return error on viral db
3.1 years ago by emiliomastriani ▴ 40
0
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1
reply
3.0k
views
Comment: Comment: kraken2-build and kraken-build both return error on viral db
3.1 years ago by emiliomastriani ▴ 40
0
votes
4
replies
3.0k
views
kraken2-build and kraken-build both return error on viral db
viruses Kraken2-build Kraken-build db viral
3.1 years ago by emiliomastriani ▴ 40
0
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0
replies
1.5k
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Comment: Comment: MinION data organization
3.1 years ago by emiliomastriani ▴ 40
0
votes
3
replies
1.5k
views
MinION data organization
fast5 MinION barcodes
3.1 years ago by emiliomastriani ▴ 40
0
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0
replies
529
views
Clustering in virome
Clustering Virome
3.1 years ago by emiliomastriani ▴ 40
0
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0
replies
555
views
From sample to appropriate tool
Virus NGS Metagenomic Shotgun WGS
3.1 years ago by emiliomastriani ▴ 40
0
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1
reply
1.1k
views
Diamond and Taxonomic information
daa megan taxonomy Diamond
updated 3.1 years ago by 102k • written 3.1 years ago by ▴ 40
0
votes
5
replies
1.9k
views
Diamond blastx: does it support SLURM?
hpc diamond sbatch slurm
updated 3.2 years ago by 7.0k • written 3.2 years ago by ▴ 40
0
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1
reply
1.9k
views
Comment: Comment: Diamond blastx: does it support SLURM?
3.2 years ago by emiliomastriani ▴ 40
0
votes
1
reply
1.9k
views
Comment: Comment: Diamond blastx: does it support SLURM?
3.2 years ago by emiliomastriani ▴ 40
0
votes
1
reply
1.5k
views
Comment: Comment: Removal of host sequences without reference genome
3.3 years ago by emiliomastriani ▴ 40
0
votes
2
replies
1.5k
views
Removal of host sequences without reference genome
meta-genomic contaminants missing host reference genome viral
3.3 years ago by emiliomastriani ▴ 40
0
votes
0
replies
773
views
Retrieving site under selective pressure on MIME
hyphy virus selective-pressure MEME
updated 2.0 years ago by 44k • written 4.6 years ago by ▴ 40
0
votes
1
reply
704
views
Pseudogene Identification in HGU133PLUS2 using BioConductor
pseudogene hgu133plus2 oligo
updated 5.1 years ago by 88k • written 5.1 years ago by ▴ 40
0
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1
reply
1.6k
views
Comment: C: Analyzing data from Agilent-023795 Human DNA Methylation Microarray 244k
6.0 years ago by emiliomastriani ▴ 40
0
votes
3
replies
1.6k
views
Analyzing data from Agilent-023795 Human DNA Methylation Microarray 244k
methylation agilent 244k CpG Chip-on-Chip
updated 6.0 years ago by 88k • written 6.0 years ago by ▴ 40
0
votes
0
replies
865
views
Subsetting or Remove Samples from dataset
subsetting samplesnames Illumina Agilent
6.1 years ago by emiliomastriani ▴ 40
3
votes
1
reply
1.0k
views
Question: Reading methylationand gene expression with only IDAT files downloaded from GEO
HMk450
updated 6.1 years ago by 88k • written 6.1 years ago by ▴ 40
1
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3
replies
2.1k
views
Pseudogene identification and classification
gene pseudogene human
7.4 years ago by emiliomastriani ▴ 40
0
votes
1
reply
2.1k
views
Comment: A: Pseudogene identification and classification
7.4 years ago by emiliomastriani ▴ 40
49 results • Page 1 of 1
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