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Showing :
questions
18
votes
21
replies
43k
views
11 follow
R org.Hs.eg.db matching ensembl gene ids with gene symbol
bioconductor
R
updated 2.6 years ago by
tlaguna
▴ 10 • written 8.2 years ago by
User6891
▴ 330
0
votes
1
reply
1.3k
views
vcf-compare alternative in R
R
vcf
updated 3.6 years ago by
a.alnawfal.1992
▴ 240 • written 3.6 years ago by
User6891
▴ 330
0
votes
2
replies
697
views
find NBCI transcript with longest coding sequence for a list of human genes
ncbi
transcript
cds
3.8 years ago by
User6891
▴ 330
2
votes
6
replies
9.5k
views
R extract the sequences from DNAStringset
R
5.0 years ago by
User6891
▴ 330
10
votes
6
replies
8.2k
views
add UMI sequences to fastq read name
UMI
Illumina
fastq
updated 5.3 years ago by
i.sudbery
19k • written 5.3 years ago by
User6891
▴ 330
15
votes
11
replies
25k
views
7 follow
Heatmap.2 R for differentially expressed genes DeSEQ2
R
updated 5.6 years ago by
Ram
43k • written 8.2 years ago by
User6891
▴ 330
7
votes
3
replies
4.8k
views
number of private variants in a human exome
next-gen
exome
updated 7.4 years ago by
Biostar
20 • written 9.7 years ago by
User6891
▴ 330
0
votes
1
reply
2.8k
views
bed file intersection overlapping regions in at least x files
bed
regions
updated 7.7 years ago by
Alex Reynolds
35k • written 7.7 years ago by
User6891
▴ 330
0
votes
0
replies
2.5k
views
merlin output error
merlin
8.0 years ago by
User6891
▴ 330
2
votes
5
replies
4.0k
views
merlin .ped file
merlin
pedigree
linkage
updated 21 months ago by
Ram
43k • written 8.3 years ago by
User6891
▴ 330
3
votes
1
reply
1.4k
views
match ucsc and ncbi transcript identifiers
ncbi
ucsc
updated 19 months ago by
Ram
43k • written 8.6 years ago by
User6891
▴ 330
0
votes
2
replies
2.3k
views
family based linkage study - design and analysis
linkage
updated 16 months ago by
Ram
43k • written 8.8 years ago by
User6891
▴ 330
4
votes
1
reply
3.6k
views
picard Hs metrics and MarkDuplicates
picard
updated 22 months ago by
Ram
43k • written 9.1 years ago by
User6891
▴ 330
2
votes
7
replies
3.6k
views
bwa mapping after fastx-trimmer
fastx-toolkit
bwa
updated 22 months ago by
Ram
43k • written 9.1 years ago by
User6891
▴ 330
6
votes
9
replies
5.7k
views
longest transcript NCBI NM_ids
ucsc
ncbi
transcript
gene
updated 23 months ago by
Ram
43k • written 9.1 years ago by
User6891
▴ 330
5
votes
2
replies
4.8k
views
merge .fastq reads of different lengths and align
fastq
bwa
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
User6891
▴ 330
6
votes
7
replies
7.0k
views
Finding genomic location of a list of sequences in human reference genome
SNP
genome
updated 2.2 years ago by
Ram
43k • written 9.4 years ago by
User6891
▴ 330
8
votes
3
replies
12k
views
blastn for short sequences
blast
updated 2.2 years ago by
Ram
43k • written 9.4 years ago by
User6891
▴ 330
2
votes
4
replies
10k
views
map cDNA position on genomic position
cDNA
mutation
genome
sequencing
updated 18 months ago by
Ram
43k • written 9.5 years ago by
User6891
▴ 330
4
votes
1
reply
8.1k
views
correct notation of indels/duplication in .vcf file
vcf
duplications
indels
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
User6891
▴ 330
5
votes
1
reply
2.6k
views
MAF 1000g ESP6500 for chrX
chromosome-x
variants
updated 16 months ago by
Ram
43k • written 9.7 years ago by
User6891
▴ 330
16
votes
2
replies
3.9k
views
small case-control exome sequencing study
exome
updated 2.5 years ago by
Ram
43k • written 9.9 years ago by
User6891
▴ 330
0
votes
3
replies
3.4k
views
split 1000genomes .vcf per individual
NGS
1000genomes
vcf
9.9 years ago by
User6891
▴ 330
2
votes
3
replies
6.2k
views
count number of variants per gene from .vcf annovar&snpsift
annovar
snpsift
vcf
gene
updated 2.6 years ago by
Ram
43k • written 10.0 years ago by
User6891
▴ 330
3
votes
3
replies
4.7k
views
How To Get Strand Information For List Of Intervals In .Bed File (To Use With Picard Calculatehsmetrics)
strand
bed
picard
updated 10.4 years ago by
brentp
24k • written 10.4 years ago by
User6891
▴ 330
1
vote
2
replies
2.0k
views
Near Target Reads In Whole Exome Data
exome-sequencing
read
updated 10.4 years ago by
skymningen
▴ 330 • written 10.4 years ago by
User6891
▴ 330
4
votes
17
replies
4.7k
views
Total Number Of Mapped Bases In Exome Ngs Data
ngs
linux
coverage
updated 10.4 years ago by
Devon Ryan
104k • written 10.4 years ago by
User6891
▴ 330
0
votes
1
reply
2.5k
views
Calculate Aligment Metrics For Ngs Data (Zero Mismatches And Uniquely Mappable Reads)
ngs
alignment
qualitycontrol
updated 10.6 years ago by
Ashutosh Pandey
12k • written 10.6 years ago by
User6891
▴ 330
1
vote
5
replies
5.6k
views
Vcf File Format Qual Column
vcf
quality
updated 11.9 years ago by
Laura
★ 1.8k • written 11.9 years ago by
User6891
▴ 330
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