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41
votes
11
replies
11k
views
How To Get Gene Regions +3Kb Upstream
ucsc gtf
updated 5.0 years ago by 20 • written 13.1 years ago by 2.8k
63
votes
16
replies
46k
views
11 follow
How To Analyze Imputed Gwas Data
gwas r snp imputation plink
updated 5.4 years ago by ▴ 70 • written 14.6 years ago by 2.8k
3
votes
0
replies
16k
views
Comment: C: How To Show The Name Of Genes On Manhattan Plot
updated 6.1 years ago by 45k • written 14.3 years ago by 2.8k
0
votes
0
replies
4.6k
views
Comment: C: Public Sources Of Gene Expression Data In Human Adipose Tissue?
updated 6.1 years ago by 45k • written 14.4 years ago by 2.8k
7
votes
5
replies
11k
views
Answer: A: Simple Retrieval Of 1000 Genomes Maf Using Rsids
updated 6.1 years ago by 45k • written 14.5 years ago by 2.8k
2
votes
0
replies
6.3k
views
Comment: C: Why Does A Rare Variant Need A Large Effect To Be Detected In Gwas?
updated 6.2 years ago by 45k • written 14.7 years ago by 2.8k
57
votes
7
replies
6.1k
views
6 follow
Bioinformatics Cores In A World Of Cloud Computing And Genome Factories
next-gen sequencing cloud core
updated 6.6 years ago by 23k • written 13.8 years ago by 2.8k
3
votes
0
replies
188k
views
Answer: A: How Can I Convert Bam To Sam?
updated 7.2 years ago by 45k • written 14.2 years ago by 2.8k
37
votes
17
replies
36k
views
11 follow
Get All The Genes In A Pathway (E.G. Kegg)
kegg pathway gwas gene
updated 7.2 years ago by 45k • written 14.3 years ago by 2.8k
0
votes
0
replies
1.8k
views
Job: Job: Bioinformatics Analyst at the University of Virginia, Charlottesville, VA, USA
R RNA-Seq ChIP-Seq
updated 2.4 years ago by 45k • written 7.4 years ago by 2.8k
0
votes
0
replies
2.5k
views
Job: Bioinformatics Analyst in University Virginia Bioinformatics Core
bioconductor deseq2 r
updated 2.5 years ago by 45k • written 7.5 years ago by 2.8k
0
votes
1
reply
33k
views
Comment: C: samtools: error while loading shared libraries: libbz2.so.1.0: cannot open share
8.1 years ago by Stephen 2.8k
60
votes
9
replies
28k
views
7 follow
Getting Allele Frequencies From 1000 Genomes
genome hapmap maf ucsc ensembl
updated 8.6 years ago by ▴ 170 • written 14.6 years ago by 2.8k
1
vote
0
replies
2.9k
views
Job: Bioinformatics analyst in University of Virginia Bioinformatics Core
ChIP-Seq RNA-Seq R
updated 2.6 years ago by 45k • written 9.4 years ago by 2.8k
12
votes
6
replies
8.0k
views
Mapping Snps To Genes (And Pathways, Go, Etc.)
pathway biomart kegg ensembl ncbi
updated 9.5 years ago by 20 • written 14.4 years ago by 2.8k
1
vote
0
replies
41k
views
Comment: C: Transcript to gene level count for DEseq(2) use- Salmon/Sailfish/Kallisto etc.
10.2 years ago by Stephen 2.8k
19
votes
4
replies
15k
views
Rna-Seq With Cuffdiff: Use Merged.Gtf From Cuffmerge Or Combined.Gtf From Cuffcompare?
cufflinks cuffdiff rna gtf
updated 3.3 years ago by 45k • written 13.9 years ago by 2.8k
0
votes
0
replies
4.1k
views
Comment: Comment: For R workshop, need bio equivalent of 'diamonds' or 'nycflights13' data.
updated 3.6 years ago by 45k • written 10.8 years ago by 2.8k
16
votes
5
replies
4.1k
views
Forum: For R workshop, need bio equivalent of 'diamonds' or 'nycflights13' data.
dplyr workshop R
updated 3.6 years ago by 45k • written 10.8 years ago by 2.8k
15
votes
5
replies
4.6k
views
Public Sources Of Gene Expression Data In Human Adipose Tissue?
gene
updated 11.5 years ago by ▴ 40 • written 14.4 years ago by 2.8k
14
votes
3
replies
7.6k
views
Measuring Conservation For Short Motif
conservation transcription
updated 12.0 years ago by ▴ 10 • written 13.8 years ago by 2.8k
29
votes
15
replies
19k
views
7 follow
Get Flanking Sequence Given A List Of Positions
snp sequence biomart ucsc galaxy
updated 12.1 years ago by 20 • written 14.6 years ago by 2.8k
11
votes
4
replies
3.0k
views
Forum: Myopenid Shutting Down
openid
updated 2.7 years ago by 45k • written 12.2 years ago by 2.8k
3
votes
0
replies
7.1k
views
Answer: A: What Are Your Most-Used Public Data Repositories?
12.2 years ago by Stephen 2.8k
1
vote
0
replies
9.7k
views
Comment: C: New Free Community Tutorial Website For Bioinformatics Learning
12.3 years ago by Stephen 2.8k
9
votes
2
replies
12k
views
Answer: Answer: Automating Gorilla And/Or Revigo Analysis
updated 4.0 years ago by 45k • written 12.5 years ago by 2.8k
2
votes
0
replies
3.2k
views
Answer: A: Comparing Peaks Coming From Different Peak Calling Programs
12.6 years ago by Stephen 2.8k
4
votes
0
replies
4.7k
views
Answer: A: Resources For Video/Webcasts Of Talks/Seminars/Courses
12.6 years ago by Stephen 2.8k
0
votes
0
replies
16k
views
Comment: C: Annotating Genomic Intervals
13.1 years ago by Stephen 2.8k
1
vote
0
replies
16k
views
Comment: C: Annotating Genomic Intervals
13.1 years ago by Stephen 2.8k
37
votes
10
replies
16k
views
8 follow
Annotating Genomic Intervals
bedtools annotation r bioconductor
updated 13.1 years ago by 36k • written 13.1 years ago by 2.8k
0
votes
0
replies
16k
views
Comment: C: Annotating Genomic Intervals
13.1 years ago by Stephen 2.8k
4
votes
1
reply
8.2k
views
Answer: C: Extract Samples With Specific Rsid And Genotype Using Plink Or Similar Tools
13.1 years ago by Stephen 2.8k
0
votes
1
reply
22k
views
Comment: C: Get Fasta File With Protein Sequences Given Entrez Gene Ids
13.2 years ago by Stephen 2.8k
13
votes
14
replies
22k
views
7 follow
Get Fasta File With Protein Sequences Given Entrez Gene Ids
entrez eutils fasta
updated 2.8 years ago by 45k • written 13.2 years ago by 2.8k
0
votes
1
reply
22k
views
Comment: C: Get Fasta File With Protein Sequences Given Entrez Gene Ids
13.2 years ago by Stephen 2.8k
0
votes
0
replies
22k
views
Comment: C: Get Fasta File With Protein Sequences Given Entrez Gene Ids
13.2 years ago by Stephen 2.8k
0
votes
1
reply
22k
views
Comment: C: Get Fasta File With Protein Sequences Given Entrez Gene Ids
13.2 years ago by Stephen 2.8k
1
vote
4
replies
3.0k
views
Gene Names Of All Proteins Having A Tyrosine Residue
proteomics
updated 13.3 years ago by 10k • written 13.3 years ago by 2.8k
31
votes
7
replies
18k
views
Cufflinks / Cuffdiff Output - How Are Tests Different?
cufflinks cuffdiff galaxy gene
13.6 years ago by Stephen 2.8k
8
votes
6
replies
4.5k
views
How To Use Ests To Examine Gene Expression
est gene ncbi
updated 13.7 years ago by 16k • written 13.7 years ago by 2.8k
12
votes
0
replies
28k
views
Answer: A: Best Way For A Beginner To Get Up To Speed On Unix Quickly?
13.8 years ago by Stephen 2.8k
7
votes
0
replies
18k
views
Answer: A: Cufflinks / Cuffdiff Output - How Are Tests Different?
13.9 years ago by Stephen 2.8k
0
votes
0
replies
18k
views
Comment: C: Cufflinks / Cuffdiff Output - How Are Tests Different?
13.9 years ago by Stephen 2.8k
2
votes
2
replies
8.9k
views
Answer: A: Geo Data Matrix Using R
14.0 years ago by Stephen 2.8k
0
votes
0
replies
18k
views
Comment: C: Cufflinks / Cuffdiff Output - How Are Tests Different?
14.0 years ago by Stephen 2.8k
5
votes
1
reply
3.6k
views
Answer: A: Power Calculations: Snp X Environment
14.0 years ago by Stephen 2.8k
6
votes
1
reply
5.8k
views
Problem With Limma On Two-Color Factorial Design: Coefficients Not Estimable
r bioconductor microarray
updated 14.0 years ago by 5.2k • written 14.0 years ago by 2.8k
5
votes
1
reply
17k
views
Answer: A: What Are The Obsolete Research Topics In Bioinformatics?
14.2 years ago by Stephen 2.8k
0
votes
0
replies
36k
views
Comment: C: Get All The Genes In A Pathway (E.G. Kegg)
14.3 years ago by Stephen 2.8k
71 results • Page 1 of 2
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