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Comment: Comment: What is the command line to map XLOC_ids from cufflinks with rice LOC_ids from m
11 months ago by isha.lily20 ▴ 10
1
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2
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620
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What is the command line to map XLOC_ids from cufflinks with rice LOC_ids from msu
mapping
11 months ago by isha.lily20 ▴ 10
0
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0
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839
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Comment: Comment: How to find coordinates of TSS from 5pUTR and TTS from 3pUTR in transcriptome/ m
11 months ago by isha.lily20 ▴ 10
1
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2
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839
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How to find coordinates of TSS from 5pUTR and TTS from 3pUTR in transcriptome/ mRNA ?
coordinates
11 months ago by isha.lily20 ▴ 10
3
votes
2
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993
views
How to calculate/ extract co-ordinates of TSS and TTS from gtf file in excel ?
extract TSS gtf calculate TTS
updated 18 months ago by 19k • written 18 months ago by ▴ 10
1
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1
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445
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How to find out TSS and TTS from rice transcriptome data ?
Transcriptome TSS TTS Rice
updated 18 months ago by 3.9k • written 18 months ago by ▴ 10
2
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2
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530
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What are the Distribution in transcriptomes ?
Distribution Transcriptomes
updated 18 months ago by 54k • written 18 months ago by ▴ 10
0
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0
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489
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How to extract promoter coordinates from transcriptome.gtf file generated after cuffmerge ? file only has exon in annotation
promoter extract coordinates
updated 23 months ago by 13k • written 23 months ago by ▴ 10
9
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6
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2.0k
views
how to fetch intron coordinates from transcriptome.gtf file ? is there any direct tool ?
intron extract coordinates
updated 23 months ago by 54k • written 23 months ago by ▴ 10
0
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1
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2.0k
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Comment: Comment: how to fetch intron coordinates from transcriptome.gtf file ? is there any dir
23 months ago by isha.lily20 ▴ 10
2
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1
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569
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how to find coordinates of 5prime and 3prime utr from transcriptome data generated after cuffmerge only contains exon in gtf
transcriptome
updated 23 months ago by 19k • written 23 months ago by ▴ 10
0
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2
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1.1k
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Comment: Comment: can i take promoter upstream 2kb from tss ?
23 months ago by isha.lily20 ▴ 10
4
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5
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1.1k
views
can i take promoter upstream 2kb from tss ?
upstream promoter 2kb tss
updated 23 months ago by ★ 1.9k • written 23 months ago by ▴ 10
1
vote
1
reply
447
views
How to do transcriptome annotation through transcriptome annotation gtf file obtained after cuffllink ?
transcriptome annotation gtf
2.0 years ago by isha.lily20 ▴ 10
0
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0
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304
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How to find out co-occurrence of motifs with tfbs ?
co-occurrence tfbs motifs
2.2 years ago by isha.lily20 ▴ 10
1
vote
1
reply
630
views
How to map query coordinates on to genome gff annotation files ?
mapping annotation gff
2.4 years ago by isha.lily20 ▴ 10
6
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4
replies
2.2k
views
How to extract promoter sequences from rice transcriptome.gtf file ?
gtf
updated 2.4 years ago by 8.5k • written 2.5 years ago by ▴ 10
1
vote
1
reply
1.1k
views
How to find/extract sequences of protein coding genes and Transposable elements from rice transciptome.gtf file ?
gtf
updated 2.5 years ago by 141k • written 2.5 years ago by ▴ 10
0
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0
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1.7k
views
Comment: Comment: Perl script on rna G quadruplex
2.7 years ago by isha.lily20 ▴ 10
0
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1
reply
1.7k
views
Comment: Comment: Perl script on rna G quadruplex
updated 2.8 years ago by 54k • written 2.8 years ago by ▴ 10
0
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1
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1.7k
views
Comment: Comment: Perl script on rna G quadruplex
updated 2.8 years ago by 54k • written 2.8 years ago by ▴ 10
6
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10
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1.7k
views
Perl script on rna G quadruplex
perl G-quadruplex rna
2.7 years ago by isha.lily20 ▴ 10
0
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1
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1.7k
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Comment: Comment: Perl script on rna G quadruplex
updated 2.8 years ago by 54k • written 2.8 years ago by ▴ 10
0
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1
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1.4k
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Comment: Comment: GC content of specific regular expression
2.8 years ago by isha.lily20 ▴ 10
0
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1
reply
1.7k
views
Comment: Comment: Perl script on rna G quadruplex
2.8 years ago by isha.lily20 ▴ 10
1
vote
1
reply
911
views
Comment: Comment: orthology enrichment
2.8 years ago by isha.lily20 ▴ 10
0
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1
reply
1.4k
views
Comment: Comment: GC content of specific regular expression
2.8 years ago by isha.lily20 ▴ 10
0
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1
reply
1.4k
views
Comment: Comment: How to find out TFBS motifs within 5'-UTR sequences
2.8 years ago by isha.lily20 ▴ 10
0
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1
reply
1.4k
views
Comment: Comment: How to find out TFBS motifs within 5'-UTR sequences
2.8 years ago by isha.lily20 ▴ 10
4
votes
6
replies
1.4k
views
How to find out TFBS motifs within 5'-UTR sequences
TFBSmotifs 5primeUTR
updated 2.8 years ago by 35k • written 2.8 years ago by ▴ 10
2
votes
8
replies
1.4k
views
GC content of specific regular expression
GC-content
updated 2.8 years ago by 43k • written 2.8 years ago by ▴ 10
5
votes
4
replies
911
views
orthology enrichment
orthology
updated 2.8 years ago by 43k • written 2.8 years ago by ▴ 10
0
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1
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9.0k
views
Comment: Comment: Quadruplex sequence batch prediction
updated 14 months ago by 43k • written 2.8 years ago by ▴ 10
33 results • Page 1 of 1
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