14 hours ago by
marco.barr
▴
80
1
vote
8
replies
418
views
1
vote
2
replies
165
views
0
votes
0
replies
77
views
0
votes
0
replies
74
views
0
votes
3
replies
229
views
0
votes
0
replies
74
views
0
votes
0
replies
74
views
updated 18 hours ago by
Ram
43k
•
written 21 hours ago by
Alexandros
•
0
0
votes
0
replies
77
views
updated 16 hours ago by
Ram
43k
•
written 18 hours ago by
Ahiad Chen Zion
•
0
0
votes
1
reply
105
views
0
votes
0
replies
70
views
0
votes
3
replies
195
views
0
votes
3
replies
164
views
0
votes
0
replies
68
views
0
votes
1
reply
132
views
updated 11 hours ago by
Ram
43k
•
written 16 hours ago by
Jonathan Yoou
▴
60
0
votes
1
reply
137
views
0
votes
0
replies
51
views
0
votes
0
replies
47
views
0
votes
3
replies
161
views
0
votes
1
reply
123
views
updated 3 hours ago by
Ram
43k
•
written 8 hours ago by
Dr Huma Naz
•
0
0
votes
1
reply
74
views
0
votes
0
replies
78
views
0
votes
0
replies
9
views
30 minutes ago by
jagdish7921
•
0
0
votes
10
replies
468
views
Recent Votes
Recent Locations •
All
Australia, 1 minute ago
Irbid, 3 minutes ago
Cardiff, UK, 5 minutes ago
rome, 8 minutes ago
Israel, 9 minutes ago
India, 11 minutes ago
South Korea, 15 minutes ago
Recent Awards •
All
Popular Question to
mathavanbioinfo
▴
90
Popular Question to
Jautis
▴
530
Popular Question to
Jonathan Yoou
▴
60
Popular Question to
Chris
▴
260
Commentator to
Lluís R.
★
1.2k
Popular Question to
miles.anderson
▴
10
Popular Question to
kamhamea
•
0
Recent Replies
Comment: POSSUM not working due to incompatible pssm file
by
Ram
43k
Please use the formatting bar (especially the `code` option) to present your post better. You can use backticks for inline code (\`text\` b…
Comment: after selecting specific GO terms to plot, cneplot is not showing any color for
by
Ram
43k
Please use the formatting bar (especially the `code` option) to present your post better. You can use backticks for inline code (\`text\` b…
Comment: Telescope issue
by
GenoMax
141k
Looks like there is a tab missing between the sequence and the quality string.
Comment: Post-imputation plot
by
LChart
3.9k
I would pull out the variants with panel_freq ~ 1 - upload_freq and min(panel_freq, upload_freq) < 0.4. I would check if these are G/C or A…
Comment: Telescope issue
by
eleven11
•
0
Hello the output is
A01940:33:GW2208142379th:3:1317:24126:3505 355 chr14 16651125 0 150M = 17034150 122900 GCTAACAGAGTTGAACCTTTCTATTG…
Comment: What does 'bundle_uuid' refer to in this metadata sheet?
by
GenoMax
141k
Looking at the [code here][1] `bundle_uuid` seems to be related to the submissions to HCA. Samples that ran on multiple lanes seem to have …
Comment: What does it mean single base resolution in sequencing?
by
LauferVA
4.2k
this is very true and increasingly true as time goes forward. thanks for supplementing this post with your own :-)
Comment: What does 'bundle_uuid' refer to in this metadata sheet?
by
jeffrey.maurer.informatics
•
0
Thank you, but I've already checked out that site to see if I was missing anything and I don't see any answers to my questions there.
Answer: p-value in CIBERSORT
by
Aspire
▴
320
You have not explicitly specified the number of permutations (which are used to calculate the p-value). The default value of the permutatio…
Comment: Telescope issue
by
GenoMax
141k
> CIGAR and query sequence are of different length [W::sam_read1] Parse error at line 9954941
Problem appears to be at that line. Can you …
Comment: What does 'bundle_uuid' refer to in this metadata sheet?
by
GenoMax
141k
SRA Run Selector shows a better view of the metadata: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA761679&o=acc_s%3Aa
Comment: Adjust pvalue in R with different approach give me all different outcome
by
Aspire
▴
320
- `p.adjust()` is supposed to receive a **numeric vector of p-values**, not a matrix.
- It makes no sense to "adjust" just one p-value, …
Comment: Downsampling fastq file
by
marco.barr
▴
80
I understood where the problem lies. I discussed with my wet lab colleagues (this is part of a bioinformatician's job...) and by showing th…
Comment: Programmatically retrieving positions of protein active site residues
by
me
▴
760
This question fits in nicely with the [SIB Swiss Institute of Bioinformatics course on Enzyme information in UniProt][1]
[1]: https://w…
Traffic: 1703 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6