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126 results • Page
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Herald:
The Biostar Herald for Monday, May 13, 2024
herald
2 days ago by
Biostar
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165
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Herald:
The Biostar Herald for Monday, May 06, 2024
herald
9 days ago by
Biostar
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4
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157
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Herald:
The Biostar Herald for Monday, April 29, 2024
herald
16 days ago by
Biostar
2.8k
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249
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Herald:
The Biostar Herald for Tuesday, April 23, 2024
herald
updated 22 days ago by
Pierre Lindenbaum
161k • written 22 days ago by
Biostar
2.8k
6
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225
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Herald:
The Biostar Herald for Monday, April 15, 2024
herald
4 weeks ago by
Biostar
2.8k
3
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194
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Herald:
The Biostar Herald for Tuesday, April 09, 2024
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5 weeks ago by
Biostar
2.8k
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211
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The Biostar Herald for Wednesday, April 03, 2024
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6 weeks ago by
Biostar
2.8k
3
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232
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Herald:
The Biostar Herald for Monday, March 25, 2024
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7 weeks ago by
Biostar
2.8k
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236
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Herald:
The Biostar Herald for Monday, March 11, 2024
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9 weeks ago by
Biostar
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4
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318
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Herald:
The Biostar Herald for Monday, February 26, 2024
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11 weeks ago by
Biostar
2.8k
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248
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Herald:
The Biostar Herald for Tuesday, February 20, 2024
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12 weeks ago by
Biostar
2.8k
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278
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Herald:
The Biostar Herald for Monday, February 12, 2024
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3 months ago by
Biostar
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298
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The Biostar Herald for Wednesday, January 31, 2024
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Biostar
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315
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The Biostar Herald for Monday, January 22, 2024
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3 months ago by
Biostar
2.8k
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302
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The Biostar Herald for Monday, January 15, 2024
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4 months ago by
Biostar
2.8k
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341
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Herald:
The Biostar Herald for Monday, January 08, 2024
herald
4 months ago by
Biostar
2.8k
2
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468
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Herald:
The Biostar Herald for Tuesday, December 19, 2023
herald
updated 4 months ago by
cmdcolin
★ 3.8k • written 4 months ago by
Biostar
2.8k
4
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381
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Herald:
The Biostar Herald for Monday, December 11, 2023
herald
5 months ago by
Biostar
2.8k
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385
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Herald:
The Biostar Herald for Monday, December 04, 2023
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5 months ago by
Biostar
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3
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388
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Herald:
The Biostar Herald for Monday, November 27, 2023
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5 months ago by
Biostar
2.8k
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427
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The Biostar Herald for Monday, November 20, 2023
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5 months ago by
Biostar
2.8k
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414
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Herald:
The Biostar Herald for Monday, November 13, 2023
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6 months ago by
Biostar
2.8k
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442
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Herald:
The Biostar Herald for Monday, November 06, 2023
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6 months ago by
Biostar
2.8k
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459
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Herald:
The Biostar Herald for Monday, October 30, 2023
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6 months ago by
Biostar
2.8k
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500
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Herald:
The Biostar Herald for Monday, October 23, 2023
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6 months ago by
Biostar
2.8k
3
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463
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Herald:
The Biostar Herald for Monday, October 16, 2023
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7 months ago by
Biostar
2.8k
4
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574
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Herald:
The Biostar Herald for Monday, October 09, 2023
herald
written 7 months ago by
Biostar
2.8k
3
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519
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Herald:
The Biostar Herald for Tuesday, September 26, 2023
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7 months ago by
Biostar
2.8k
4
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562
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Herald:
The Biostar Herald for Wednesday, September 20, 2023
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7 months ago by
Biostar
2.8k
4
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510
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Herald:
The Biostar Herald for Wednesday, September 06, 2023
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8 months ago by
Biostar
2.8k
4
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763
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Herald:
The Biostar Herald for Monday, August 28, 2023
herald
updated 8 months ago by
Jesse
▴ 770 • written 8 months ago by
Biostar
2.8k
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619
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Herald:
The Biostar Herald for Thursday, August 24, 2023
herald
8 months ago by
Biostar
2.8k
2
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697
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Herald:
The Biostar Herald for Wednesday, August 09, 2023
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9 months ago by
Biostar
2.8k
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807
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Herald:
The Biostar Herald for Wednesday, August 02, 2023
herald
9 months ago by
Biostar
2.8k
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1.1k
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Herald:
The Biostar Herald for Thursday, June 15, 2023
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11 months ago by
Biostar
2.8k
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779
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Herald:
The Biostar Herald for Monday, June 05, 2023
herald
11 months ago by
Biostar
2.8k
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846
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Herald:
The Biostar Herald for Tuesday, May 23, 2023
herald
11 months ago by
Biostar
2.8k
3
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841
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Herald:
The Biostar Herald for Thursday, May 11, 2023
herald
12 months ago by
Biostar
2.8k
5
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1
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840
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Herald:
The Biostar Herald for Monday, May 01, 2023
herald
updated 12 months ago by
cmdcolin
★ 3.8k • written 12 months ago by
Biostar
2.8k
2
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733
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Herald:
The Biostar Herald for Monday, April 24, 2023
herald
12 months ago by
Biostar
2.8k
1
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718
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Herald:
The Biostar Herald for Monday, April 17, 2023
herald
13 months ago by
Biostar
2.8k
3
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0
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754
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Herald:
The Biostar Herald for Monday, April 10, 2023
herald
13 months ago by
Biostar
2.8k
5
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0
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658
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Herald:
The Biostar Herald for Monday, April 03, 2023
herald
13 months ago by
Biostar
2.8k
2
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646
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Herald:
The Biostar Herald for Tuesday, March 28, 2023
herald
13 months ago by
Biostar
2.8k
2
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710
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Herald:
The Biostar Herald for Monday, March 13, 2023
herald
14 months ago by
Biostar
2.8k
2
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0
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672
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Herald:
The Biostar Herald for Tuesday, February 28, 2023
herald
14 months ago by
Biostar
2.8k
2
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0
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699
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Herald:
The Biostar Herald for Monday, February 20, 2023
herald
15 months ago by
Biostar
2.8k
1
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726
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Herald:
The Biostar Herald for Wednesday, February 15, 2023
herald
15 months ago by
Biostar
2.8k
2
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708
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Herald:
The Biostar Herald for Monday, February 06, 2023
herald
15 months ago by
Biostar
2.8k
3
votes
0
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633
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Herald:
The Biostar Herald for Monday, January 30, 2023
herald
15 months ago by
Biostar
2.8k
126 results • Page
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Recent Votes
A: How To Merge Two Fastq.Gz Files?
Answer: Annotating file using bcftools
Answer: Getting differential ChIP-seq peaks between conditions after calling consensus p
Answer: Getting differential ChIP-seq peaks between conditions after calling consensus p
Convert fastq.gz to fastq.bgz
Comment: ggrepel function: geom_text_repel()
Comment: Missing protein (VEGF-A) in String db
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Recent Replies
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
by
ATpoint
82k
There has been some spam bots in this thread which we cleaned up, you might still get notifications on it, just ignore.
Comment: Details on salmon index
by
ATpoint
82k
You're lucky that the senior developer @rob is often around, so you probably get your experts answer soon.
Answer: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
by
ATpoint
82k
I think the issue is that there is some contamination of groups. If you plot a PCA or MDS you see that there is a clear separation between …
Comment: What's next after GATK variant calling pipeline?
by
Michael
54k
The link didn't work for me. After getting variants from HaplotypeCaller, there are a lot of different options for follow-up analyses, but …
Comment: Getting differential ChIP-seq peaks between conditions after calling consensus p
by
ATpoint
82k
That having said, linked paper and its authors developed the csaw package over at Bioconductor that uses a window approach to avoid peak ca…
Comment: Getting differential ChIP-seq peaks between conditions after calling consensus p
by
Ian
6.0k
Really interesting answer. I had missed that paper and will digest it asap. I usually use DiffBind, but recently have been looking into p…
Comment: Annotating file using bcftools
by
kl
▴ 10
It worked with this `bcftools index -t $DATADIR/cpro_imputed_hrcgrch37.R2_0.3.vcf.gz` bcftools annotate \ -a $RefGenomes/All_2018…
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
by
egascon
• 0
This is true. However, there are a number of studies that have done bioinformatics analysis in whole blood to see if there is a possibility…
Comment: ggrepel function: geom_text_repel()
by
sooni
▴ 20
Thank you for help! I solved the probelm with the package.
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
by
egascon
• 0
I have checked the quality of the arrays using PCA and Boxplot (images attached) and some of the samples may deviate a little but perhaps n…
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
hophuquy0944
• 0
the nt database was extracted, and this is latest version of nt database in ncbi and blastn with version 2.15. I used many query file.fast…
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
hophuquy0944
• 0
they don't have clear answer for this problem. I run all subset of this data to find out error subsets database but it seem not any error i…
Comment: ggrepel function: geom_text_repel()
by
zx8754
11k
There is a dedicated package for this, see - https://bioconductor.org/packages/release/bioc/html/EnhancedVolcano.html
Comment: Sam file Header problem
by
Pierre Lindenbaum
161k
-R "@RG\tID:sample\tSM:sample\tPL:Illumina" where is this '@RG' in the header anyway ? are you sure you're handling the correct fil…
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
Pierre Lindenbaum
161k
it looks like the same error.
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