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124 results • Page
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Herald:
The Biostar Herald for Monday, April 29, 2024
herald
48 minutes ago by
Biostar
2.7k
1
vote
1
reply
198
views
Herald:
The Biostar Herald for Tuesday, April 23, 2024
herald
updated 5 days ago by
Pierre Lindenbaum
161k • written 5 days ago by
Biostar
2.7k
6
votes
0
replies
197
views
Herald:
The Biostar Herald for Monday, April 15, 2024
herald
14 days ago by
Biostar
2.7k
3
votes
0
replies
160
views
Herald:
The Biostar Herald for Tuesday, April 09, 2024
herald
19 days ago by
Biostar
2.7k
1
vote
0
replies
169
views
Herald:
The Biostar Herald for Wednesday, April 03, 2024
herald
25 days ago by
Biostar
2.7k
3
votes
0
replies
194
views
Herald:
The Biostar Herald for Monday, March 25, 2024
herald
5 weeks ago by
Biostar
2.7k
3
votes
0
replies
207
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Herald:
The Biostar Herald for Monday, March 11, 2024
herald
6 weeks ago by
Biostar
2.7k
4
votes
0
replies
285
views
Herald:
The Biostar Herald for Monday, February 26, 2024
herald
8 weeks ago by
Biostar
2.7k
1
vote
0
replies
222
views
Herald:
The Biostar Herald for Tuesday, February 20, 2024
herald
9 weeks ago by
Biostar
2.7k
2
votes
0
replies
252
views
Herald:
The Biostar Herald for Monday, February 12, 2024
herald
10 weeks ago by
Biostar
2.7k
1
vote
0
replies
273
views
Herald:
The Biostar Herald for Wednesday, January 31, 2024
herald
12 weeks ago by
Biostar
2.7k
3
votes
0
replies
292
views
Herald:
The Biostar Herald for Monday, January 22, 2024
herald
3 months ago by
Biostar
2.7k
1
vote
0
replies
273
views
Herald:
The Biostar Herald for Monday, January 15, 2024
herald
3 months ago by
Biostar
2.7k
2
votes
0
replies
316
views
Herald:
The Biostar Herald for Monday, January 08, 2024
herald
3 months ago by
Biostar
2.7k
2
votes
1
reply
436
views
Herald:
The Biostar Herald for Tuesday, December 19, 2023
herald
updated 4 months ago by
cmdcolin
★ 3.8k • written 4 months ago by
Biostar
2.7k
4
votes
0
replies
356
views
Herald:
The Biostar Herald for Monday, December 11, 2023
herald
4 months ago by
Biostar
2.7k
2
votes
0
replies
360
views
Herald:
The Biostar Herald for Monday, December 04, 2023
herald
4 months ago by
Biostar
2.7k
3
votes
0
replies
366
views
Herald:
The Biostar Herald for Monday, November 27, 2023
herald
5 months ago by
Biostar
2.7k
3
votes
0
replies
402
views
Herald:
The Biostar Herald for Monday, November 20, 2023
herald
5 months ago by
Biostar
2.7k
3
votes
0
replies
387
views
Herald:
The Biostar Herald for Monday, November 13, 2023
herald
5 months ago by
Biostar
2.7k
4
votes
0
replies
409
views
Herald:
The Biostar Herald for Monday, November 06, 2023
herald
5 months ago by
Biostar
2.7k
2
votes
0
replies
434
views
Herald:
The Biostar Herald for Monday, October 30, 2023
herald
6 months ago by
Biostar
2.7k
2
votes
0
replies
481
views
Herald:
The Biostar Herald for Monday, October 23, 2023
herald
6 months ago by
Biostar
2.7k
3
votes
0
replies
445
views
Herald:
The Biostar Herald for Monday, October 16, 2023
herald
6 months ago by
Biostar
2.7k
4
votes
1
reply
552
views
Herald:
The Biostar Herald for Monday, October 09, 2023
herald
written 6 months ago by
Biostar
2.7k
3
votes
0
replies
496
views
Herald:
The Biostar Herald for Tuesday, September 26, 2023
herald
7 months ago by
Biostar
2.7k
4
votes
0
replies
539
views
Herald:
The Biostar Herald for Wednesday, September 20, 2023
herald
7 months ago by
Biostar
2.7k
4
votes
0
replies
487
views
Herald:
The Biostar Herald for Wednesday, September 06, 2023
herald
7 months ago by
Biostar
2.7k
4
votes
1
reply
740
views
Herald:
The Biostar Herald for Monday, August 28, 2023
herald
updated 8 months ago by
Jesse
▴ 740 • written 8 months ago by
Biostar
2.7k
1
vote
0
replies
597
views
Herald:
The Biostar Herald for Thursday, August 24, 2023
herald
8 months ago by
Biostar
2.7k
2
votes
0
replies
679
views
Herald:
The Biostar Herald for Wednesday, August 09, 2023
herald
8 months ago by
Biostar
2.7k
1
vote
0
replies
795
views
Herald:
The Biostar Herald for Wednesday, August 02, 2023
herald
9 months ago by
Biostar
2.7k
2
votes
0
replies
1.1k
views
Herald:
The Biostar Herald for Thursday, June 15, 2023
herald
10 months ago by
Biostar
2.7k
2
votes
0
replies
769
views
Herald:
The Biostar Herald for Monday, June 05, 2023
herald
10 months ago by
Biostar
2.7k
1
vote
0
replies
834
views
Herald:
The Biostar Herald for Tuesday, May 23, 2023
herald
11 months ago by
Biostar
2.7k
3
votes
0
replies
834
views
Herald:
The Biostar Herald for Thursday, May 11, 2023
herald
11 months ago by
Biostar
2.7k
5
votes
1
reply
826
views
Herald:
The Biostar Herald for Monday, May 01, 2023
herald
updated 12 months ago by
cmdcolin
★ 3.8k • written 12 months ago by
Biostar
2.7k
2
votes
0
replies
723
views
Herald:
The Biostar Herald for Monday, April 24, 2023
herald
12 months ago by
Biostar
2.7k
1
vote
0
replies
710
views
Herald:
The Biostar Herald for Monday, April 17, 2023
herald
12 months ago by
Biostar
2.7k
3
votes
0
replies
746
views
Herald:
The Biostar Herald for Monday, April 10, 2023
herald
12 months ago by
Biostar
2.7k
5
votes
0
replies
647
views
Herald:
The Biostar Herald for Monday, April 03, 2023
herald
13 months ago by
Biostar
2.7k
2
votes
0
replies
637
views
Herald:
The Biostar Herald for Tuesday, March 28, 2023
herald
13 months ago by
Biostar
2.7k
2
votes
0
replies
700
views
Herald:
The Biostar Herald for Monday, March 13, 2023
herald
13 months ago by
Biostar
2.7k
2
votes
0
replies
663
views
Herald:
The Biostar Herald for Tuesday, February 28, 2023
herald
14 months ago by
Biostar
2.7k
2
votes
0
replies
686
views
Herald:
The Biostar Herald for Monday, February 20, 2023
herald
14 months ago by
Biostar
2.7k
1
vote
0
replies
719
views
Herald:
The Biostar Herald for Wednesday, February 15, 2023
herald
14 months ago by
Biostar
2.7k
2
votes
0
replies
701
views
Herald:
The Biostar Herald for Monday, February 06, 2023
herald
14 months ago by
Biostar
2.7k
3
votes
0
replies
622
views
Herald:
The Biostar Herald for Monday, January 30, 2023
herald
15 months ago by
Biostar
2.7k
1
vote
0
replies
601
views
Herald:
The Biostar Herald for Monday, January 23, 2023
herald
15 months ago by
Biostar
2.7k
2
votes
1
reply
789
views
Herald:
The Biostar Herald for Monday, January 16, 2023
herald
updated 15 months ago by
seidel
11k • written 15 months ago by
Biostar
2.7k
124 results • Page
1 of 3
Recent Votes
The Biostar Herald for Monday, April 29, 2024
A: Bam And Indexed Bam Files
High Malat-1 expression in single cell data
Segmentation fault using gemma
Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
A: Insert Size And Fragment Size ?
A: vcf calculation of allele counts and allele number
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Recent Replies
Comment: Limma Analysis Agilent Microarray Data (GPL1708)
by
Gordon Smyth
★ 7.0k
I actually advised you not to remove duplicate probes, especially as you seem to be use probe annotation that is very old and possibly out …
Comment: Segmentation fault using gemma
by
dimpleadiwal050896
• 0
Hello, were you able to rectify this. If yes, do tell. I am getting a similar error. Thank you
Comment: Can I merge Hi-C fastq files from different lanes?
by
GenoMax
141k
If the data is a technical sequencing replicate i.e. the same pool of samples has run on two lanes then you can indeed merge the two lanes …
Comment: What should I consider as FASTA for dataset?
by
GenoMax
141k
> Should I use the shortened FASTA from pdb or should I use the full FASTA for my dataset? What analysis are you trying to use the data fo…
Comment: Is it possible to bulk download files from GEO repository?
by
GenoMax
141k
Galaxy specific requests are best posted on their help forum: https://help.galaxyproject.org/
Answer: Two references 1. genome 2. plasmid for bowtie2
by
GenoMax
141k
You can simply `cat` all reference sequences together. Create an index file with `bowtie2` and then align as usual.
Answer: High Malat-1 expression in single cell data
by
ATpoint
82k
My comment is general since I've never looked at this gene specifically, but metrics of poor cell quality in my experience never come alone…
Comment: What does it mean single base resolution in sequencing?
by
GenoMax
141k
>You known, 90% + genomic region is transcripted. So, total RNA-seq theoretically covers most genome region. Perhaps but not all of that …
Answer: Using Delly/Pindel/breakdancer for Identifying Transgene Insertion Sites in Mous
by
trausch
★ 1.9k
For [delly][1], we usually augment the mouse reference genome with the additional sequence, then remap and then look in the delly output fo…
Comment: NGS forensics: how to know if data is fabricated
by
i.sudbery
19k
Thats very intersting! What are the features in your classifier?
Comment: Limma Analysis Agilent Microarray Data (GPL1708)
by
hagl
▴ 10
Thank you very much for the response. Following your recommendation in pursuing option one by selecting highest expressions and subsequent …
Answer: RNAseq one control two conditions, shared and exclusive genes
by
Mohamed Abderrahmane
▴ 20
I think it would be pertinent to use DESEq2 to perform two comparisons: the first one between the control group and condition 1, and the se…
Comment: Longitudinal analysis of subpopulations: which approach is better?
by
Lluís R.
★ 1.2k
Many thanks for the helpful comment. Indeed, I read some of them, but I was not fully convinced and I missed the link FAQ of DESeq2. The re…
Comment: Longitudinal analysis of subpopulations: which approach is better?
by
ATpoint
82k
Keeping data together is most powerful and most convenient as you have a single analysis object and a single count matrix. I would always d…
Comment: Questions about a bug when transferring cram file to bam file
by
jkbonfield
★ 1.2k
Assuming you have network access and the md5sum is registered with the EBI's reference server, yes - it'll be downloaded and cached locally.
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