0
votes
1
reply
92
views
0
votes
1
reply
92
views
updated 9 hours ago by
morovatunc
▴
550
•
written 13 hours ago by
PoscaXVIII
•
0
0
votes
3
replies
98
views
updated 3 hours ago by
Jordan M Eizenga
▴
360
•
written 5 hours ago by
Qi
•
0
0
votes
1
reply
65
views
updated 53 minutes ago by
Basti
★
1.7k
•
written 9 hours ago by
oduduabasi.isaiah
•
0
0
votes
0
replies
4
views
0
votes
3
replies
682
views
0
votes
3
replies
2.0k
views
updated 6 days ago by
aishwarya
•
0
•
written 5.2 years ago by
blooming.daisy333
▴
110
0
votes
0
replies
117
views
0
votes
1
reply
163
views
0
votes
2
replies
235
views
0
votes
11
replies
731
views
6 days ago by
evmae
•
0
0
votes
0
replies
180
views
5 days ago by
juliviglino
•
0
0
votes
5
replies
356
views
0
votes
1
reply
202
views
0
votes
1
reply
381
views
0
votes
0
replies
361
views
0
votes
3
replies
730
views
0
votes
1
reply
757
views
0
votes
7
replies
786
views
0
votes
1
reply
904
views
0
votes
0
replies
595
views
0
votes
1
reply
217
views
0
votes
1
reply
209
views
0
votes
1
reply
199
views
0
votes
0
replies
171
views
5 days ago by
Ahmed
•
0
0
votes
0
replies
163
views
0
votes
0
replies
339
views
updated 4 days ago by
Pierre Lindenbaum
157k
•
written 4 days ago by
nonaddldy
▴
10
0
votes
1
reply
207
views
0
votes
0
replies
154
views
updated 4 days ago by
Ram
40k
•
written 4 days ago by
Ahmed.waraky
▴
10
0
votes
0
replies
139
views
0
votes
13
replies
562
views
0
votes
0
replies
151
views
updated 3 days ago by
4galaxy77
2.8k
•
written 4 days ago by
shakyaram079
•
0
0
votes
2
replies
269
views
0
votes
4
replies
435
views
updated 3 days ago by
Jeremy Leipzig
21k
•
written 4 days ago by
Can Abdullah
•
0
0
votes
0
replies
168
views
0
votes
0
replies
102
views
Recent Votes
Recent Locations •
All
India, just now
Belgium, Brussels, 1 minute ago
Portugal, 2 minutes ago
Doha, Qatar, 5 minutes ago
South Korea, 6 minutes ago
France, 6 minutes ago
United States, 8 minutes ago
Recent Awards •
All
Popular Question to
bharata1803
▴
550
Scholar to
Mensur Dlakic
★
25k
Popular Question to
morovatunc
▴
550
Popular Question to
fi1d18
★
4.2k
Recent Replies
Comment: ncbi error report log for validate fastq issue
by
1769mkc
★
1.1k
" you're forced to use it" this is sort of since I have use docker image and then pass the GSM id as list of input first to check if the th…
Comment: ncbi error report log for validate fastq issue
by
ATpoint
77k
I don't think this log is helpful. Can't you just get fastq download links via sra-explorer.info or the tool mentioned by @rob in his answe…
Comment: How the first sequencing template removed in pair end sequencing
by
rfran010
▴
810
Great! It looks like USER enzyme is used to cleave before the first read sequencing and formamidopyrimidine DNA N-glycosylase is used to cl…
Comment: module and trait correlation for WGCNA
by
andres.firrincieli
3.4k
Hi,
First of all, you should never use DEGs for WGCNA. See @kevinblighe answer: [link][1].
> However, when it comes to module-trait analy…
Comment: identify DEGs across all conditions and per specific conditions
by
luffy
▴
50
@camillab, Please look into Kevin Blighe's response in this [post][1] hope that helps.
[1]: https://www.biostars.org/p/357464/
Answer: Running Rockhopper from a command-line
by
langziv
▴
50
I managed to resolve the issue by passing absolute paths instead of relative ones.
Comment: Which function is best for pathway analysis?
by
luffy
▴
50
@chris Please look into @Hamid Ghaedi's well documented [post][1] on ORA and GSEA, Or [this][2] documentation. Hope this helps.
[1]: ht…
Comment: Bacterial Pangenome Analysis
by
kirankumareripogu
▴
10
Hi @liorglic,
Thank you for your prompt response.
I totally agree with you that different blastp cuttoffs provide different results and…
Answer: Fetch Fastq files directly for SRA data
by
Rob
6.2k
What is the accession for the project? Many — though not all — of the projects present in the NCBI SRA are also hosted in the European Nuc…
Comment: Dataset's name in BioMart for S. pombe
by
YUYANG.OON
•
0
Works with `useMart(biomart="fungi_mart", dataset="spombe_eg_gene", host="https://fungi.ensembl.org")`
Comment: Bug of vg surject
by
Jordan M Eizenga
▴
360
This is still hard to interpret without the commands. What would help is if you literally copied the full UNIX commands along with their re…
Comment: Which function is best for pathway analysis?
by
Chris
▴
180
Thank you for your reply! Do you have code that I and others can implement? I am not sure how to customize the gmt file from my differentia…
Comment: Bug of vg surject
by
Qi
•
0
Thanks your reply!
my resulte show below:
5x_pan_sv.bam 1347587601 #converted from gam to bam F1 indel=0.830392 snp=0.932511
5…
Comment: Bug of vg surject
by
Jordan M Eizenga
▴
360
It might help us to diagnose the problem if you included the exact commands that you used and showed the results that you are concerned abo…
Traffic: 1718 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6