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Showing: reference genome • reset
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<prev • 49 results • page 1 of 2 • next >
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Rearrangement of draft genomes in bacterial strains using reference genome
draft genomes bacterial strains reference genome written 7 weeks ago by amresharma1 • 0 • updated 8 days ago by Biostar ♦♦ 20
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187
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BwaMemIndexImageCreator fails to generate reference.img file
gatk reference genome index written 11 weeks ago by fmail1221 • 0 • updated 8 weeks ago by 7ehuang • 0
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2
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546
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2
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Description of alt loci in ref genome GRCh38.d1.vd1
alternate loci tcga reference genome written 14 months ago by Maarten Slagter • 110 • updated 3 months ago by m_two • 0
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1
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191
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Is it a problem that the reference genome is not at the chromosome level?
reference genome scaffolds chromosome written 3 months ago by beausoleilmo • 250 • updated 3 months ago by Brice Sarver • 3.2k
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220
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Sea of Ns in downloaded mm10 from NCBI and GRCm38.p6 primary sequence from Ensemble
reference genome rna-seq written 3 months ago by akh22 • 40
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2
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618
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UK Biobank reference genome?
uk biobank reference genome written 8 months ago by Sal.Leggio63 • 0 • updated 3 months ago by Eric T. • 2.5k
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156
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Ref Genome Conundrum
alignment reference genome dna written 4 months ago by aalith • 10
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3
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415
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5 follow
3
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Forum: When will the hg19/grch37 finally become obsolete?
forum reference genome written 5 months ago by gdaly9000 • 10 • updated 5 months ago by Jeremy Leipzig ♦ 18k
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225
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Mapping reads to reference genome + Denovo assembly
reads reference genome blocks denovo assembly written 6 months ago by Elizabeth • 20
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227
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Which reference genome for the annotation of the 1KG variant data by snpEff?
snpeff reference genome variant annotation written 6 months ago by Nam Le Quang • 70
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393
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Low Mapping percentage with Minimap2 due to contamination
minimap2 reference genome mapping nanopore written 8 months ago by rah • 20
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1
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457
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1
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Problems with the reference genome in Stringtie
stringtie reference genome rna-seq lncrna written 8 months ago by iraia.munoa • 70 • updated 8 months ago by Devon Ryan ♦ 92k
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1
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391
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5 follow
1
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Finding out assembly reference from bam file
snp calling bam reference genome written 10 months ago by cmcouto.silva • 30 • updated 10 months ago by biobiu • 110
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1
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292
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1
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Comparing VCFs constructed from mapping to different reference genomes
vcf comparisons reference genome written 11 months ago by kwalter • 10
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1
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2.5k
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1
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TCGA CNV/SNP6 Reference Sequence - hg19
tcga reference genome snp cnv hg19 written 5.1 years ago by dirigible2012 • 310 • updated 11 months ago by Biostar ♦♦ 20
3
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1
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995
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1
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reference genome hs37d5 with PhiX
ngs reference genome written 13 months ago by SOHAIL • 300 • updated 11 months ago by kelso • 20
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1
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495
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1
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Choosing human reference genome and indexing
indexing reference genome rna-seq written 13 months ago by Batu • 170 • updated 13 months ago by Devon Ryan ♦ 92k
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7 follow
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Compatibility between my reference genome and GTF file
alignment reference genome rna-seq hisat2 written 13 months ago by Batu • 170
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12 follow
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What is the difference between GRCh37 and hs37? And hg19?
assembly hg19 hg38 reference genome hs37 written 16 months ago by juanfdelahoz • 40
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Download latest reference genome assembly for exome sequencing alignment and variant calling
reference genome dna sequence alignment written 17 months ago by svlachavas • 600 • updated 15 months ago by Biostar ♦♦ 20
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407
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Are there minimum requirements from a de novo genome assembly for it to be suitably used as a reference for SNP calling?
assembly reference genome snp wgs written 15 months ago by nancy • 70
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Psuedoautosomal regions in reference genome
reference genome par written 16 months ago by bwczech • 90
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bcftools consensus not working when using -H flag
vcf software error bcftools reference genome written 18 months ago by kirannbishwa01 • 1.1k • updated 18 months ago by finswimmer ♦ 12k
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1
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721
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1
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Creating a Bowtie2 Index for S.Purpuratus to use in Galaxy
bowtie2 galaxy reference genome bowtie alignment written 18 months ago by alice_pieplow • 0 • updated 18 months ago by genomax ♦ 74k
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640
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GRCh37 -> GRCh38 alternative loci index conversion
assembly bam reference genome written 20 months ago by lefthandgergo • 10
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1
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616
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Are reference sequences from GENCODE, Ensembl and RefSeq the same if they are called GRCh38.p10, it is just the annotation that varies?
grch38 reference genome annotations rna-seq written 21 months ago by amina.mcdiarmid • 0
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drosophila reference genome - flybase >6 - explanation of files
drosophila reference genome written 24 months ago by cpak1981 • 100
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2
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1.6k
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5 follow
2
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How to extract all the simple repeats from the hg19 reference genome
simple repeats reference genome written 2.3 years ago by Jackie • 70 • updated 2.3 years ago by Alex Reynolds ♦ 29k
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Modifying fasta file based on vcf information
vcf fasta reference genome written 4.4 years ago by Jautis • 280 • updated 2.4 years ago by adeena_hassan • 40
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1
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1.3k
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1
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where to download GRCh36
reference genome human written 2.6 years ago by nkinney06 • 30 • updated 2.6 years ago by genomax ♦ 74k
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