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<prev • 28 results • page 1 of 1 • next >
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bcftools consensus not working when using -H flag
vcf software error bcftools reference genome written 5 days ago by kirannbishwa01 • 790 • updated 8 hours ago by finswimmer • 2.0k
2
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1
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81
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1
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Creating a Bowtie2 Index for S.Purpuratus to use in Galaxy
bowtie2 galaxy reference genome bowtie alignment written 20 days ago by alice_pieplow • 0 • updated 20 days ago by genomax ♦ 47k
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110
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GRCh37 -> GRCh38 alternative loci index conversion
assembly bam reference genome written 9 weeks ago by lefthandgergo • 0
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1
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181
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Are reference sequences from GENCODE, Ensembl and RefSeq the same if they are called GRCh38.p10, it is just the annotation that varies?
grch38 reference genome annotations rna-seq written 3 months ago by amina.mcdiarmid • 0
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drosophila reference genome - flybase >6 - explanation of files
drosophila reference genome written 6 months ago by cpak1981 • 100
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2
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5 follow
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How to extract all the simple repeats from the hg19 reference genome
simple repeats reference genome written 9 months ago by Jackie • 60 • updated 9 months ago by Alex Reynolds ♦ 23k
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Modifying fasta file based on vcf information
vcf fasta reference genome written 2.9 years ago by Jautis • 240 • updated 11 months ago by adeena_hassan • 40
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1
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605
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1
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where to download GRCh36
reference genome human written 13 months ago by nkinney06 • 30 • updated 13 months ago by genomax ♦ 47k
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557
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Reference genome and reference assembly selection and preparation for bioinformatics analysis
reference genome written 14 months ago by Petr Ponomarenko • 2.5k
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What are the flanking regions in alt loci of GRCh38?
alt loci genome grch38 reference genome written 20 months ago by ivar.grytten • 20
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How to map BAM file to reference genome "[fai_fetch_seq] The sequence not found"
fasta bam reference genome written 18 months ago by beausoleilmo • 190 • updated 17 months ago by Biostar ♦♦ 20
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662
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Variant calling within and between 2 nematode strains
reads reference genome snp written 20 months ago by standonn • 10 • updated 20 months ago by Medhat • 7.5k
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Alignment of seq reads to a genome, process after STAR?
genome rnaseq reference genome written 21 months ago by Biogeek • 270 • updated 21 months ago by Devon Ryan ♦ 79k
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1
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23andme files uses GRCh37 or GRCh38 ?
genome 23andme reference genome orientation written 23 months ago by ahm3dhany • 10 • updated 23 months ago by Devon Ryan ♦ 79k
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How to make an annotation file (.gtf/.gff) for a customized reference genome?
annotation ngs next-gen reference genome rna-seq written 24 months ago by Shahzad • 10
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1
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571
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Problem with human_g1k_v37
reference genome human_g1k_v37 hg19 written 2.0 years ago by martyferr90 • 30
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1
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860
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Any way to differentiate from a BAM which minor build human reference genome was used for alignment?
bam reference genome written 2.2 years ago by Irene@Sequencing.com • 220
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1
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566
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1
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rna seq analysis
next-gen reference genome rna-seq written 2.2 years ago by kartikayprasad • 10 • updated 2.2 years ago by andrew.j.skelton73 ♦ 4.8k
4
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1
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888
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1
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Position of N nucleotides in reference genome
nucleotide reference genome written 2.5 years ago by QVINTVS_FABIVS_MAXIMVS • 2.1k • updated 2.5 years ago by Alex Reynolds ♦ 23k
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1.6k
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Ensembl gene ID conversion to gene name
reference genome rna-seq written 2.5 years ago by Annika Forsingdal • 190 • updated 2.5 years ago by EagleEye • 5.1k
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Fastq reads mapped to the desired position on reference genome
fastq reference genome mapping bwa written 2.8 years ago by Louis Kok • 10 • updated 2.8 years ago by Alex Reynolds ♦ 23k
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MiSeq Analysis Beginner: First steps after getting MiSeq paired end data
assembly demultiplexing miseq reference genome written 2.9 years ago by Sara S. • 0
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8 follow
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How to determine reference genome that was used for alignment given BAM with obscure or no header
reference genome alignment reference bam written 2.9 years ago by Irene@Sequencing.com • 220 • updated 2.9 years ago by Ryan Thompson • 3.3k
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Forum: Pan-genome graphs make the popular science press
forum reference genome pan-genome written 3.0 years ago by Mary ♦ 11k • updated 3.0 years ago by Istvan Albert ♦♦ 76k
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How to obtain chromosome number from given scaffold number
reference genome scaffold snp chromosome number written 3.0 years ago by Parimala Devi • 30 • updated 3.0 years ago by Steven Lakin • 1.3k
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what is the difference between reference genome sequence from UCSC and ensembl ?
reference genome written 3.2 years ago by lin.pei26 • 50
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Importance of the reference genome, it's quality when mapping reads
assembly ngs reference genome mapping bwa written 3.3 years ago by Adrian Pelin • 2.1k
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TCGA CNV/SNP6 Reference Sequence - hg19
tcga reference genome snp cnv hg19 written 3.7 years ago by dirigible2012 • 310 • updated 3.6 years ago by Sean Davis ♦ 24k
<prev • 28 results • page 1 of 1 • next >
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