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Answer: imputation through beagle
Answer: imputation through beagle
Answer: imputation through beagle
Comment: Publish a Letter in higher impact vs Research article in lower impact
Comment: Publish a Letter in higher impact vs Research article in lower impact
Answer: Practical Haplotype Graph v2 not finding correct paths
A: Looking For A Way To Count Total Length Of Regions Of Bed File
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Answer: Duplicated sequence samtools
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Pierre Lindenbaum
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the sequence c_000007023807_aloha2_low_cov is duplicated in the reference grep c_000007023807_aloha2_low_cov path/to/reference.fasta
Comment: imputation through beagle
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analyst
▴ 50
Thank you so much dthorbur. Yes I am new to imputation analysis. I will follow your kind suggestions. Thanks again!
Answer: Benchmarking RNASeq Variant Calling Pipeline (Short Reads)
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lagartija
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I don't know but another way of doing it would be to combine different datasets of different strains that you know are clonal. Then you kno…
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bk11
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Please check out these posts https://www.biostars.org/p/367626/
Comment: Galaxy StringTie error
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trkfs
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will do, thank you
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bk11
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You can do the following- Idents(SeuratObj) <- "orig.ident" control_set <- subset(SeuratObj, idents = c("counts.control","data.…
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> I have sent a bug report to the Galaxy administrator If you have not done so please post this in Galaxy help forum for directed help: h…
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Wondering, if it was total RNAseq data? or ployA
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It is still obscure to me how many different tissues you would like to include into your comparison and what your intended design is. To …
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Juke34
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You can get a look here https://www.biostars.org/p/9465973/
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A version of the mouse rDNA repeat can be found here: https://www.ncbi.nlm.nih.gov/nuccore/BK000964 Use the dropdown menu at top-left t…
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Christopher
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Hello, Mathew. Firstly, thank you for answering my question. **Sorry, what analysis are you trying to perform with these databases?** I a…
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As long as it is the same GIAB sample you could compare your SNP with the SNP's available for the whole genome set.
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Dear Mensur, Thanks so much for your reply!! In my case, I got 1 control(healthy) and 2 disease mouse Single cell RNA-sew data, so I …
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ATpoint
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The relevant code line is precisely the same as in the question.
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