Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
1.1k
views
Comment: Comment: Problem merging plink files for somatic variants.
20 months ago by Palgrave ▴ 140
0
votes
2
replies
1.1k
views
Problem merging plink files for somatic variants.
plink somatic vcf
20 months ago by Palgrave ▴ 140
1
vote
1
reply
780
views
convert and merge somatic vcf file to plink format
gwas plink vcf
updated 20 months ago by 5.2k • written 20 months ago by ▴ 140
2
votes
1
reply
900
views
Overview of NCBI virus types (DNA, RNA, ssDNA etc...)
NCBI virus
updated 3.1 years ago by 154k • written 3.1 years ago by ▴ 140
0
votes
0
replies
1.6k
views
Bootstrap coxph model in R
coxph bootstrap R
3.9 years ago by Palgrave ▴ 140
1
vote
1
reply
1.6k
views
GATK mutech2: Sample not found in BAM header
GATK
updated 4.0 years ago by ▴ 160 • written 4.0 years ago by ▴ 140
3
votes
0
replies
751
views
MARS-seq
MARS-Seq single-cell
4.0 years ago by Palgrave ▴ 140
0
votes
0
replies
837
views
STAR-aligner: genome load in a for-loop
STAR STAR-aligner
4.1 years ago by Palgrave ▴ 140
0
votes
0
replies
1.5k
views
Comment: Comment: LOOCV on limma results
4.5 years ago by Palgrave ▴ 140
3
votes
2
replies
2.4k
views
hisat2 output from paired en reads.
hisat2 rna-seq
updated 4.6 years ago by ★ 2.2k • written 4.6 years ago by ▴ 140
1
vote
0
replies
977
views
Methylation frequency + and - strand
methylation Bismark
4.6 years ago by Palgrave ▴ 140
0
votes
1
reply
1.1k
views
Different results in limma if group is removed
limma edgeR
updated 4.6 years ago by 89k • written 4.6 years ago by ▴ 140
0
votes
2
replies
1.5k
views
LOOCV on limma results
loocv limma cross-validation
4.5 years ago by Palgrave ▴ 140
0
votes
1
reply
1.7k
views
Comment: Comment: extract unmapped reads from WGS data - which samtools parameters to choose
4.6 years ago by Palgrave ▴ 140
0
votes
4
replies
1.7k
views
extract unmapped reads from WGS data - which samtools parameters to choose
WGS Sequencing
updated 4.6 years ago by ▴ 590 • written 4.6 years ago by ▴ 140
1
vote
0
replies
15k
views
Comment: Comment: samtools multithreads
4.6 years ago by Palgrave ▴ 140
5
votes
4
replies
15k
views
samtools multithreads
samtools
4.6 years ago by Palgrave ▴ 140
0
votes
1
reply
5.5k
views
Comment: Comment: Get unmapped reads from cram/bam file
4.6 years ago by Palgrave ▴ 140
0
votes
1
reply
5.5k
views
Comment: Comment: Get unmapped reads from cram/bam file
4.6 years ago by Palgrave ▴ 140
2
votes
13
replies
5.5k
views
Get unmapped reads from cram/bam file
alignment
updated 4.6 years ago by 90k • written 4.6 years ago by ▴ 140
0
votes
1
reply
5.5k
views
Comment: Comment: Get unmapped reads from cram/bam file
4.6 years ago by Palgrave ▴ 140
0
votes
0
replies
5.5k
views
Comment: Comment: Get unmapped reads from cram/bam file
4.6 years ago by Palgrave ▴ 140
0
votes
1
reply
5.5k
views
Comment: Comment: Get unmapped reads from cram/bam file
4.6 years ago by Palgrave ▴ 140
0
votes
1
reply
2.4k
views
Dispersion and variance in RNA-seq explained.
RNA-Seq
updated 3.7 years ago by 45k • written 4.6 years ago by ▴ 140
0
votes
0
replies
1.0k
views
cross validation output interpretation from survival analysis
survival R coxph cross-validation
updated 4.9 years ago by 89k • written 4.9 years ago by ▴ 140
0
votes
0
replies
2.0k
views
DimPlot: labels clusters with sample name
RNA-Seq sequencing R Seurat
updated 4.9 years ago by 45k • written 4.9 years ago by ▴ 140
0
votes
1
reply
1.0k
views
Differentially expression from a TPM-normalized single-cell data frame
RNA-seq R next-gen-sequencing
updated 2.7 years ago by 45k • written 5.0 years ago by ▴ 140
2
votes
2
replies
3.5k
views
Convert ID for Human Gene 1.0 ST Array
R microarray affymetrix
updated 5.2 years ago by 154k • written 5.2 years ago by ▴ 140
1
vote
5
replies
1.7k
views
Get read counts for reads overlapping exon-intron junction from STAR-output
STAR rna-seq
5.7 years ago by Palgrave ▴ 140
0
votes
1
reply
1.7k
views
Comment: C: Get splice-read counts from STAR-output
5.7 years ago by Palgrave ▴ 140
0
votes
1
reply
1.7k
views
Comment: C: Get splice-read counts from STAR-output
5.7 years ago by Palgrave ▴ 140
0
votes
1
reply
5.5k
views
Comment: C: Kaplan Meier curves in R
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 140
0
votes
0
replies
3.6k
views
Comment: C: Correlation between two expression matrices in blood and tumor
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 140
0
votes
1
reply
9.2k
views
Comment: A: Gene Expression Correlation
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 140
0
votes
1
reply
117k
views
Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 140
0
votes
1
reply
6.6k
views
Comment: C: Align two fasta files against each other
6.2 years ago by Palgrave ▴ 140
0
votes
1
reply
2.2k
views
Comment: A: Find 3'UTRs for species
6.2 years ago by Palgrave ▴ 140
5
votes
7
replies
2.2k
views
Find 3'UTRs for species
Assembly alignment
updated 2.4 years ago by 45k • written 6.2 years ago by ▴ 140
4
votes
4
replies
6.6k
views
Align two fasta files against each other
alignment
6.2 years ago by Palgrave ▴ 140
0
votes
1
reply
2.2k
views
Comment: C: Find 3'UTRs for species
6.2 years ago by Palgrave ▴ 140
1
vote
1
reply
2.2k
views
Comment: A: Find 3'UTRs for species
6.2 years ago by Palgrave ▴ 140
0
votes
1
reply
117k
views
Comment: A: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 8.6 years ago by 45k • written 9.9 years ago by ▴ 140
0
votes
0
replies
6.3k
views
Comment: C: Expression Matrix And Pearson'S Correlation Coefficient
9.8 years ago by Palgrave ▴ 140
0
votes
1
reply
117k
views
Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
9.8 years ago by Palgrave ▴ 140
2
votes
3
replies
5.5k
views
Kaplan Meier curves in R
RNA-Seq R survival
updated 3.3 years ago by 45k • written 9.8 years ago by ▴ 140
0
votes
1
reply
3.6k
views
Comment: C: Correlation between two expression matrices in blood and tumor
9.8 years ago by Palgrave ▴ 140
0
votes
1
reply
3.6k
views
Comment: C: Correlation between two expression matrices in blood and tumor
9.8 years ago by Palgrave ▴ 140
1
vote
7
replies
3.6k
views
Correlation between two expression matrices in blood and tumor
R rna-seq
updated 9.8 years ago by 105k • written 9.8 years ago by ▴ 140
1
vote
0
replies
1.9k
views
miRNA isomiR analysis using Biostrings
sequence R
updated 4.0 years ago by 45k • written 11.4 years ago by ▴ 140
49 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6