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Comment: Comment: Pandas dataframe to H5ad file
22 months ago by roy.granit ▴ 880
0
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1
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3.5k
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Comment: Comment: Pandas dataframe to H5ad file
22 months ago by roy.granit ▴ 880
6
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4
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3.5k
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Pandas dataframe to H5ad file
H5 python pandas
22 months ago by roy.granit ▴ 880
1
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6
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3.8k
views
How do I plot several sns.clustermap heatmaps in a single figure?
python seaborn
updated 23 months ago by • 0 • written 2.6 years ago by ▴ 880
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0
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3.8k
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Comment: C: How do I plot several sns.clustermap heatmaps in a single figure?
2.5 years ago by roy.granit ▴ 880
0
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1
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3.8k
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Comment: C: How do I plot several sns.clustermap heatmaps in a single figure?
2.6 years ago by roy.granit ▴ 880
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0
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1.1k
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Comment: C: Interpreting DEseq2 output
2.8 years ago by roy.granit ▴ 880
0
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0
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1.1k
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Comment: C: Interpreting DEseq2 output
2.8 years ago by roy.granit ▴ 880
3
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4
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1.1k
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Interpreting DEseq2 output
DEseq2
updated 2.8 years ago by 12k • written 2.8 years ago by ▴ 880
0
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1
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1.7k
views
Comment: C: Align to custom sequences using STAR aligner
3.0 years ago by roy.granit ▴ 880
0
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0
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1.7k
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Comment: C: Align to custom sequences using STAR aligner
3.0 years ago by roy.granit ▴ 880
2
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5
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1.7k
views
Align to custom sequences using STAR aligner
RNA-Seq STAR
3.0 years ago by roy.granit ▴ 880
2
votes
1
reply
445
views
How to check how variable a given DNA sequence is?
SNP DNA
updated 3.0 years ago by 154k • written 3.1 years ago by ▴ 880
0
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0
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609
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Comment: C: Statistical significance of the intersection of three gene lists
3.1 years ago by roy.granit ▴ 880
1
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2
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609
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Statistical significance of the intersection of three gene lists
statistics hypergeometric
3.1 years ago by roy.granit ▴ 880
0
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0
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614
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Comment: C: ChIP to genes
3.1 years ago by roy.granit ▴ 880
2
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3
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614
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ChIP to genes
ChIP-Seq
3.1 years ago by roy.granit ▴ 880
0
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0
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862
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Comment: C: Cutadapt terminated with exit signal: '24'.
3.2 years ago by roy.granit ▴ 880
0
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4
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862
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Cutadapt terminated with exit signal: '24'.
RNA-Seq
3.2 years ago by roy.granit ▴ 880
0
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1
reply
862
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Comment: C: Cutadapt terminated with exit signal: '24'.
3.2 years ago by roy.granit ▴ 880
0
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1
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1.5k
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Comment: C: data matrix from firebrowser figure
updated 3.4 years ago by 39k • written 7.4 years ago by ▴ 880
0
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0
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4.0k
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Comment: C: HiSeq vs GA for RNASeqV2 on TCGA
updated 3.4 years ago by 39k • written 7.4 years ago by ▴ 880
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0
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2.5k
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Comment: C: transcription factor /miRNA enrichment analysis
updated 3.5 years ago by 39k • written 7.5 years ago by ▴ 880
0
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1
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2.5k
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Comment: C: transcription factor /miRNA enrichment analysis
updated 3.5 years ago by 39k • written 7.5 years ago by ▴ 880
0
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0
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1.5k
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Comment: C: Why blast doesn't cache previous queries?
updated 3.5 years ago by 39k • written 7.5 years ago by ▴ 880
1
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3
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1.6k
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Plotting CNV matrix as heatmap using python
python heatmap cnv
updated 3.5 years ago by ★ 2.1k • written 3.8 years ago by ▴ 880
1
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1
reply
3.4k
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Answer: A: How to download time series expression datasets?
updated 3.5 years ago by 39k • written 7.6 years ago by ▴ 880
0
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1
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1.8k
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Comment: C: distance between cells in scRNA-seq expression data
3.5 years ago by roy.granit ▴ 880
0
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2
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1.8k
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Comment: C: distance between cells in scRNA-seq expression data
3.5 years ago by roy.granit ▴ 880
5
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6
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1.8k
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distance between cells in scRNA-seq expression data
scRNAseq
3.5 years ago by roy.granit ▴ 880
3
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0
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1.7k
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Answer: Answer: About gene id
updated 5 months ago by 39k • written 8.0 years ago by ▴ 880
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0
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1.0k
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Comment: C: What does "Quadratic sum" mean?
3.7 years ago by roy.granit ▴ 880
1
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2
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1.0k
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What does "Quadratic sum" mean?
CNV inferCNV
3.7 years ago by roy.granit ▴ 880
1
vote
1
reply
2.1k
views
Genome vs transcriptome alignement in STAR
STAR RNA-Seq
updated 3.7 years ago by ★ 2.5k • written 3.7 years ago by ▴ 880
0
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0
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1.4k
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Comment: C: How does one count unmapped transcripts ?
3.7 years ago by roy.granit ▴ 880
0
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3
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1.4k
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Comment: C: How does one count unmapped transcripts ?
3.7 years ago by roy.granit ▴ 880
8
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14
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1.4k
views
How does one count unmapped transcripts ?
RNA-Seq
updated 3.7 years ago by 8.2k • written 3.7 years ago by ▴ 880
0
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2
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1.4k
views
Comment: C: How does one count unmapped transcripts ?
3.7 years ago by roy.granit ▴ 880
0
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1
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1.4k
views
Comment: C: How does one count unmapped transcripts ?
3.7 years ago by roy.granit ▴ 880
0
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0
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1.6k
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Comment: C: Plotting CNV matrix as heatmap using python
3.7 years ago by roy.granit ▴ 880
3
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5
replies
11k
views
GSEA on single-cell cluster data
single-cell GSEA R
updated 4.3 years ago by • 0 • written 4.7 years ago by ▴ 880
0
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1
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1.5k
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Comment: C: Interpreting DEseq2 results
4.3 years ago by roy.granit ▴ 880
0
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1
reply
1.5k
views
Comment: C: Interpreting DEseq2 results
4.3 years ago by roy.granit ▴ 880
3
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8
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1.5k
views
Interpreting DEseq2 results
DEseq2
4.3 years ago by roy.granit ▴ 880
0
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0
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2.7k
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Comment: C: How is Mutation.Count derived in TCGA?
4.3 years ago by roy.granit ▴ 880
0
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1
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2.0k
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Comment: C: Analyzing 3' RNA seq library with DESeq2
4.4 years ago by roy.granit ▴ 880
5
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5
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2.0k
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Analyzing 3' RNA seq library with DESeq2
RNA-Seq DEseq2
4.4 years ago by roy.granit ▴ 880
4
votes
1
reply
1.1k
views
What transcript quantification tool would you recommend for 3' prime RNA-seq?
RNA-Seq transcript quantification salmon
updated 4.4 years ago by 47k • written 4.4 years ago by ▴ 880
0
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1
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11k
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Comment: C: GSEA on single-cell cluster data
4.7 years ago by roy.granit ▴ 880
0
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0
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1.6k
views
Comment: C: IGV empty tracks render in blue
4.7 years ago by roy.granit ▴ 880
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